Searcharxiv⌕ Search

arXiv subjects

Nabeel Seedat

Publications and source records attributed to Nabeel Seedat.

39 records · Page 3Linked to original sources

Machine learning discrimination of Parkinson's Disease stages from walker-mounted sensors data

Clinical methods that assess gait in Parkinson's Disease (PD) are mostly qualitative. Quantitative methods necessitate costly instrumentation or cumbersome wearable devices, which limits their usability. Only few of these methods can discriminate different stages in PD progression. This study applies machine learning methods to discriminate six stages of PD. The data was acquired by low cost walker-mounted sensors in an experiment at a movement disorders clinic and the PD stages were clinically labeled. A large set of features, some unique to this study are extracted and three feature selection methods are compared using a multi-class Random Forest (RF) classifier. The feature subset selected by the Analysis of Variance (ANOVA) method provided performance similar to the full feature set: 93% accuracy and had significantly shorter computation time. Compared to PCA, this method also enabled clinical interpretability of the selected features, an essential attribute to healthcare applications. All selected-feature sets are dominated by information theoretic features and statistical features and offer insights into the characteristics of gait deterioration in PD. The results indicate a feasibility of machine learning to accurately classify PD severity stages from kinematic signals acquired by low-cost, walker-mounted sensors and implies a potential to aid medical practitioners in the quantitative assessment of PD progression. The study presents a solution to the small and noisy data problem, which is common in most sensor-based healthcare assessments.

cs.LG↗

Automated machine vision enabled detection of movement disorders from hand drawn spirals

A widely used test for the diagnosis of Parkinson's disease (PD) and Essential tremor (ET) is hand-drawn shapes,where the analysis is observationally performed by the examining neurologist. This method is subjective and is prone to bias amongst different physicians. Due to the similarities in the symptoms of the two diseases, they are often misdiagnosed.Studies which attempt to automate the process typically use digitized input, where the tablet or specialized equipment are not affordable in many clinical settings. This study uses a dataset of scanned pen and paper drawings and a convolutional neural network (CNN) to perform classification between PD, ET and control subjects. The discrimination accuracy of PD from controls was 98.2%. The discrimination accuracy of PD from ET and from controls was 92%. An ablation study was conducted and indicated that correct hyper parameter optimization can increases the accuracy up to 4.33%. Finally, the study indicates the viability of using a CNN-enabled machine vision system to provide robust and accurate detection of movement disorders from hand drawn spirals.

cs.CV↗

Towards calibrated and scalable uncertainty representations for neural networks

For many applications it is critical to know the uncertainty of a neural network's predictions. While a variety of neural network parameter estimation methods have been proposed for uncertainty estimation, they have not been rigorously compared across uncertainty measures. We assess four of these parameter estimation methods to calibrate uncertainty estimation using four different uncertainty measures: entropy, mutual information, aleatoric uncertainty and epistemic uncertainty. We evaluate the calibration of these parameter estimation methods using expected calibration error. Additionally, we propose a novel method of neural network parameter estimation called RECAST, which combines cosine annealing with warm restarts with Stochastic Gradient Langevin Dynamics, capturing more diverse parameter distributions. When benchmarked against mutilated image data, we show that RECAST is well-calibrated and when combined with predictive entropy and epistemic uncertainty it offers the best calibrated measure of uncertainty when compared to recent methods.

cs.LG↗