arXiv subjects

Nadine C. Bradbury

Publications and source records attributed to Nadine C. Bradbury.

9 recordsLinked to original sources

arXiv2026

Momentum conservation for ab initio calculations with pseudopotentials via a phase space electronic structure formulation

We demonstrate how to build a robust phase space electronic Hamiltonian $\hat{H}_\text{PS}(\boldsymbol{R},\boldsymbol{P})$ that depends on nuclear position $\boldsymbol{R}$ and nuclear momentum $\boldsymbol{P}$ in the presence of ionic pseudopotentials. In particular, we show that in order to account for the non-local component of a pseudopotential while also conserving linear and angular momentum, one is forced to introduce a non-local one-electron operator $\hat{\boldsymbolΓ}^\text{nl}$ that couples electronic and nuclear momenta together. To test the validity of our ansatz, we derive a generalized form of Nafie's exact equality (which relates electronic momentum and electronic position) so as to include the presence of pseudopotentials. We then benchmark our proposed phase space electronic structure theory against this generalized Nafie-like result for a diverse set of diatomic molecules spanning a wide range of elements. We find excellent agreement across this ab initio test set, highlighting the strength of our method in capturing meaningful electronic momentum beyond the Born-Oppenheimer framework.

cond-mat.other↗

arXiv2026

Electronic Structure in a Phase Space, non-Born-Oppenheimer Framework: Geometric Forces and Moody-Shapere-Wilzcek Revisited

We revisit the three-body problem in quantum mechanics in two and three dimensions, generating both exact eigenvalues and eigenvectors of the Hamiltonian and a series of approximate solutions as calculated with a variety of different schemes to separate heavy ("nuclear") and light ("electronic") particles. We show that, with minimal extra cost, one can go beyond the Born-Oppenheimer approximation by performing electronic structure calculations parameterized by both the nuclear position (${\mathbf X})$ and the nuclear momentum ($\mathbf{P}$), a so-called phase space theory of electronic structure. In particular, we demonstrate that such phase space electronic structure calculations correctly incorporate the non-inertial Coriolis and centrifugal forces felt by electrons in a moving nuclear frame, thus leading to far more accurate eigenenergies and electronic angular momenta than has been possible before. We also demonstrate that our approach naturally incorporates and generalizes the Moody-Shapere-Wilczek magnetic monopole for the non-abelian Berry curvature (now allowing for vibrational motion rather than a diatomic of fixed length). We argue that the resulting approach should be extremely useful for propagating dynamics where angular momentum flows between nuclei and electrons; in particular, if extended to include spin degrees of freedom, the present approach will offer a practical means to study chiral induced spin selectivity through the lens of chiral phonons and coupled nuclear-electronic motion.

physics.chem-ph↗

arXiv2026

Environment-Induced Exciton Renormalization in the Photosystem II Reaction Center

Protein electrostatics tune excitation energies in the Photosystem II reaction center (PSII-RC), yet a fully quantum-mechanical many-body description of how the surrounding protein environment renormalizes excitons has remained computationally inaccessible. The Bethe-Salpeter equation (BSE) within many-body perturbation theory accurately describes excitonic physics through an explicit electron-hole interaction, but is prohibitively expensive for systems containing thousands of valence electrons. Here, we show that for sufficiently large systems the BSE becomes simpler to solve when treated with modern stochastic sampling techniques, as atomistic interactions self-average. In this regime, the effective electron-hole interaction mediated by the environment is governed by collective $k$-dependent polarization. These insights enable an ab initio study of the PSII-RC in which all six chlorins forming the hexameric dye core are treated explicitly together with a roughly seven Angstrom local protein environment. We directly compare the low-lying optical excitations of the isolated chromophore hexamer (1276 valence electrons) and the protein-dye cluster (3238 valence electrons). For $Q_y$ excitations near 680 nm, inclusion of the protein environment induces polarization-dependent energy shifts, redistributes spectral weight, and alters exciton delocalization and pigment character. Lateral and transverse asymmetries in the low-lying excited states are captured at the BSE level of theory. These results establish that we now have the tools for many-body calculations of biological nanostructures.

physics.chem-ph↗

arXiv2025

Parameterized Attenuated Exchange for Generalized TDHF@$v_W$ Applications

Building upon our previously developed time-dependent Hartree-Fock (TDHF)@$v_W$ method, based on many-body perturbation theory and specifically the Bethe-Salpeter Equation (BSE), we introduce a parameterization scheme for the attenuated exchange kernel, $v_W(|r - r'|)$. In the original method, $v_W$ was determined individually for each system via an efficient stochastic short-time TD Hartree propagation for the screened Coulomb interaction, $W(r,r')$. The new parameterization leverages photochemical similarities in exciton binding energies (or exchange interaction attenuation) among molecules with comparable static dielectric responses. We parameterize the inverse dielectric function using a low-order polynomial with error function apodization, calibrated on a few representative molecules, each with its own $v_W$. Using only 7 parameters, the parameterized $v_W$ is fully grid-independent and broadly applicable within a family of molecules. This enables TDHF@$v_W$ that retains BSE-level accuracy, achieving a mean absolute error of $\sim0.1$ eV compared to experimental optical gaps and representing a five- to ten-fold improvement over conventional TD density functional theory or TDHF while reducing the cost to that of standard TDHF.

physics.chem-ph↗

arXiv2025

Symmetry Breaking as Predicted by a Phase Space Hamiltonian with a Spin Coriolis Potential

We perform electronic structure calculations for a set of molecules with degenerate spin-dependent ground states ($^3$CH$_2$, $^2$CH$_3^{\bullet}$, $^3$O$_2$) going beyond the Born-Oppenheimer approximation and accounting for nuclear motion. According to a phase space (PS) approach that parametrizes electronic states ($|Φ\rangle$) and electronic energies ($E$) by nuclear position and momentum (i.e., $|Φ(\mathbf{R},\mathbf{P}) \rangle$ and $E(\mathbf{R},\mathbf{P})$), we find that the presence of degenerate spin degrees of freedom leads to broken symmetry ground states. More precisely, rather than a single degenerate minimum at $(\mathbf{R},\mathbf{P}) = (\mathbf{R}_{min}, 0)$, the ground state energy has two minima at $(\mathbf{R},\mathbf{P}) = (\mathbf{R}_{min}',\pm \mathbf{P}_{min})$ (where $\mathbf{R}_{min}'$ is close to $\mathbf{R}_{min}$), dramatically contradicting the notion that the total energy of the system can be written in separable form as $E = \frac{\mathbf{P}^2}{2M} + V_{el}$. Although we find that the broken symmetry solutions have small barriers between them for the small molecules, we hypothesize that the barriers should be macroscopically large for metallic solids, thus offering up a new phase-space potential energy surface for simulating the Einstein-de Haas effect.

physics.chem-ph↗

arXiv2024

No more gap-shifting: Stochastic many-body-theory based TDHF for accurate theory of polymethine cyanine dyes

We introduce an individually fitted screened-exchange interaction for the time-dependent Hartree-Fock (TDHF) method and show that it resolves the missing binding energies in polymethine organic dye molecules compared to time-dependent density functional theory (TDDFT). The interaction kernel, which can be thought as a dielectric function, is generated by stochastic fitting to the screened-Coulomb interaction of many-body perturbation theory (MBPT), specific to each system. We test our method on the flavylium (Flav) and indocyanine green (ICG) dye families with a modifiable length of the polymethine bridge, leading to excitations ranging from the visible to short-wave infrared (SWIR). Our approach validates earlier observations on the importance of inclusion of medium range exchange for the exciton binding energy. Our resulting method, TDHF@$v_W$, also achieves a mean absolute error on par with MBPT at a computational cost on par with local-functional TDDFT.

physics.chem-ph↗

arXiv2024

Sparse-Stochastic Fragmented Exchange for Large-Scale Hybrid TDDFT Calculations

We extend our recently developed sparse-stochastic fragmented exchange formalism for ground-state hybrid DFT (ngH-DFT) to calculate absorption spectra within linear-response time-dependent Generalized Kohn-Sham DFT (LR-GKS-TDDFT), for systems consisting of thousands of valence electrons within a grid-based/plane-wave representation. A mixed deterministic/fragmented-stochastic compression of the exchange kernel, here using long-range explicit exchange functionals, provides an efficient method for accurate optical spectra. Both real-time propagation as well frequency-resolved Casida-equation-type approaches for spectra are presented, and the method is applied to large molecular dyes.

physics.chem-ph↗

arXiv2023

Deterministic/Fragmented-Stochastic Exchange for Large Scale Hybrid DFT Calculations

We develop an efficient approach to evaluate range-separated exact exchange for grid or plane-wave based representations within the Generalized Kohn-Sham DFT (GKS-DFT) framework. The Coulomb kernel is fragmented in reciprocal space, and we employ a mixed deterministic-stochastic representation, retaining long wavelength (low-$k$) contributions deterministically and using a sparse ("fragmented") stochastic basis for the high-$k$ part. Coupled with a projection of the Hamiltonian onto a subspace of valence and conduction states from a prior local-DFT calculation, this method allows for the calculation of long-range exchange of large molecular systems with hundreds and potentially thousands of coupled valence states delocalized over millions of grid points. We find that even a small number of valence and conduction states is sufficient for converging the HOMO and LUMO energies of the GKS-DFT. Excellent tuning of long-range separated hybrids (RSH) is easily obtained in the method for very large systems, as exemplified here for the chlorophyll hexamer of Photosystem II with 1,320 electrons.

physics.chem-ph↗

arXiv2023

Optimized Attenuated Interaction: Enabling Stochastic Bethe-Salpeter Spectra for Large Systems

We develop an improved stochastic formalism for the Bethe-Salpeter equation, based on an exact separation of the effective-interaction $W$ to two parts, $W=(W-v_W)+v_W$ where the latter is formally any translationally-invariant interaction $v_W(r-r')$. When optimizing the fit of $v_W$ exchange kernel to $W$, by using a stochastic sampling of $W$, the difference $W-v_W$ becomes quite small. Then, in the main BSE routine, this small difference is stochastically sampled. The number of stochastic samples needed for an accurate spectrum is then largely independent of system size. While the method is formally cubic in scaling, the scaling prefactor is small due to the constant number of stochastic orbitals needed for sampling $W$.

physics.chem-ph↗