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Naren Ramakrishnan

Publications and source records attributed to Naren Ramakrishnan.

At least 19 recordsLinked to original sources
arXiv2026

Skepticism vs. Convenience: Physics Students' Perceptions and Use of Large Language Models Before and After Instruction

The recent emergence of large language models (LLMs) has produced research focusing on the ability of these tools to solve physics problems, evaluate student work, or otherwise impact the problem-solving process of students. However, studies exploring how physics students perceive LLMs (in terms of capabilities, educational impacts, usage, and role in problem solving) remain limited. This study evaluates the first-year physics students' perceptions toward LLMs and further explores how these perceptions change after practicing problem-solving with and without LLMs and engaging in a reflective lesson on the functioning and educational impacts of LLMs. We find that student opinions toward LLMs vary, with generally favorable perceptions of their capabilities but greater skepticism regarding their value for learning. Despite this skepticism, a majority of students self-report regularly using LLMs to obtain help, commonly reporting deadlines and convenience as motivating factors. Following the lesson, students expressed greater skepticism toward LLMs in several areas, with 88% of students believing that LLMs can leave them with a false sense of confidence about their understanding, up from 58% before the lesson.

physics.ed-ph↗
arXiv2026

IUU+DB: Tracking Illegal, Unreported, and Unregulated Fishing, Seafood Fraud, and Labor Abuse through LLM-driven Information Extraction

Illegal, unreported, and unregulated fishing (IUU) traditionally refers to fishing activities that violate applicable laws or occur in areas that lack applicable laws. We propose the term IUU+ to capture a broader suite of fisheries sector environmental and associated supply chain trade-related crimes and behaviors. Although IUU+ activity is widely recognized as a serious threat to marine ecosystems, markets, and livelihoods, a quantitative understanding of these incidents, e.g., their frequency, geography, species, actors, and patterns in the type of illicit activity, remains difficult to obtain. We propose IUU+DB, a large language model driven system for building a global incident database of IUU+ activity. The system ingests heterogeneous documents, classifies whether they describe relevant incidents, extracts key data elements such as actors, locations, species, vessels, violations, and enforcement outcomes, and supports deduplication and trend analysis. Case studies and validation results show that IUU+DB can help organize fragmented evidence, surface geographic and behavioral hotspots, support fisheries-domain specific research in academia and non-government organizations, assist source and species risk assessments for industry, and provide support for policy implementation and targeted enforcement efforts to government agencies.

cs.IR↗
arXiv2026

Adaptive Graph-of-Islands Evolution for Automatic Feature Engineering with LLMs

Automatic feature engineering (AutoFE) for tabular data requires discovering informative transformations from a large program space. Existing approaches suffer from three limitations: classical methods rely on fixed operator libraries with limited expressivity, LLM-based methods generate proposals from static prompts without retaining search experience, and evolutionary methods use fixed migration policies that ignore task-specific cross-family transfer utility. We introduce TOPOFE, a framework that formulates AutoFE as graph-structured multi-island evolutionary program search. The transformation space is partitioned into semantically coherent families, each explored by an island through LLM-guided mutation and crossover. Each island maintains a Prompt Adaptation Memory that accumulates accept/reject feedback to steer proposals toward productive regions without parameter updates. To coordinate global exploration, TOPOFE dynamically learns a directed topology graph whose edge weights encode transfer utility between transformation families. Cross-island transfer is triggered by adaptive saturation detection and performed through LLM-mediated hybrid synthesis, enabling discovery of compositional feature programs that cannot emerge from isolated local search. Experiments on 29 tabular datasets show that TOPOFE consistently outperforms most state-of-the-art AutoFE methods on classification and regression tasks. Beyond predictive performance, TOPOFE produces feature sets with lower redundancy and higher representational coverage, while the learned topology graph acquires meaningful task-specific transfer structure correlated with downstream gains. The discovered feature programs transfer reliably across diverse predictors and LLM backbones, demonstrating that improvements arise from TOPOFE's structured search and adaptive coordination rather than backbone-specific generation capability.

cs.AI↗
arXiv2026

How (Not) to Hybridize Neural and Mechanistic Models for Epidemiological Forecasting

Epidemiological forecasting from surveillance data is a hard problem and hybridizing mechanistic compartmental models with neural models is a natural direction. The mechanistic structure helps keep trajectories epidemiologically plausible, while neural components can capture non-stationary, data-adaptive effects. In practice, however, many seemingly straightforward couplings fail under partial observability and continually shifting transmission dynamics driven by behavior, waning immunity, seasonality, and interventions. We catalog these failure modes and show that robust performance requires making non-stationarity explicit: we extract multi-scale structure from the observed infection series and use it as an interpretable control signal for a controlled neural ODE coupled to an epidemiological model. Concretely, we decompose infections into trend, seasonal, and residual components and use these signals to drive continuous-time latent dynamics while jointly forecasting and inferring time-varying transmission, recovery, and immunity-loss rates. Across early outbreak and multi-wave regimes, our approach attains the lowest RMSE on five datasets (21-63% reduction over the strongest default-configured baseline), achieves the best peak detection accuracy, and infers time-varying epidemiological rates within ground-truth ranges, without relying on auxiliary covariates.

cs.LG↗
arXiv2026

Adversarial Data Modeling in Epidemiology

Epidemiological models increasingly rely on crowdsourced, self-reported behavioral data such as vaccination status, mask usage, and social distancing adherence. This data, however, is not passively sampled but instead strategically reported, making it a canonical case of adversarial input to a data mining pipeline. Individuals misreport for various reasons, e.g., to avoid penalties, to access benefits, or to express distrust in public health authorities. We introduce a data-modeling framework that casts the interaction between the population and a public health authority as a signaling game. This approach provides both a generative model of strategically-corrupted behavioral data and a mechanism for the receiver to recover reliable signal from it. Individuals (senders) choose how to report their behaviors, while the public health authority (receiver) updates their epidemiological model(s) based on potentially distorted signals, and modifies its trust in incoming reports accordingly. Focusing on deception around masking and vaccination, we characterize analytically game equilibrium outcomes as distinct regimes of data corruption, and evaluate the degree to which deception can be tolerated while maintaining epidemic control through policy interventions. In large scale simulations, our results show that even under pervasive dishonesty in pooling equilibria, well-designed sender and receiver strategies can still maintain effective epidemic control. Real-world validation further shows that behavioral distortions often exhibit structured patterns rather than arbitrary noise. This work advances the understanding of adversarial data in epidemiology and offers tools for designing more robust public health models in the presence of strategic user behavior.

cs.GT↗
arXiv2026

EpiNarrate: Agentic Generation of Grounded Narratives from Epidemiological Scenario Projections

Generation of clear and accessible public health narratives is critical for communicating complex epidemiological projections to policymakers and the general public at large. Such narratives require more than simply reporting numbers: projections must be contextualized and quantitatively grounded across multiple dimensions. Further, projections are often derived from large ensemble datasets which combine intervention assumptions, geographic and demographic strata, outcomes, time horizons, and uncertainty quantiles. However, directly using large language models (LLMs) to summarize and contextualize such data often leads to inconsistencies, omissions, and fragile behavior. We introduce an agentic framework (EpiNarrate) for public health report generation that separates structured numerical reasoning from natural-language generation. The framework first extracts scenario axes and organizes them into a partial-order schema, enabling systematic traversal of the underlying multidimensional space. It then constructs an augmented dataset and derives valid quantitative statements through a comparison grammar that enforces semantic and arithmetic consistency. To balance coverage and non-redundancy, we introduce an interestingness-driven selection mechanism based on maximum-entropy principles. Experiments on the COVID-19 Scenario Modeling Hub demonstrate that our model produces narratives with improved factual grounding and broader coverage of salient epidemiological patterns, while preserving the style of expert-written reports.

cs.CL↗
arXiv2026

Demystify, Use, Reflect, Assess (DURA): An Experience Report on LLM Integration in CS2

Student access to Large Language Models (LLMs) is reshaping learning behaviors; at the same time students are entering the workforce where effective LLM use is becoming an expected skill. In this Experience Report we share our DURA framework (Demystify-Use-Reflect-Assess) and materials we used to restructure our CS2 course to allow the use of LLMs. We first demystified LLMs, then provided guidance on use with required attribution. We also added reflections related to LLM use at three points throughout the semester to encourage student meta-cognition around LLM use. We increased the value of proctored assessments in tandem with allowing retakes and including questions that explicitly assess skills from programming assignments. Students reported using LLMs for clarifying course concepts, debugging, understanding assignment guidelines, and determining test cases, but also still sought assistance via office hours and TAs, monitored Piazza, and reviewing course content. Students articulated thoughtful and strategic approaches to LLM use and also valued the instructional content and guidance from course staff. Student use of office hours increased slightly this semester and student perceptions that the instructor cares about them and their learning improved.

cs.CY↗
arXiv2026

LLM-ACES: Closed-Loop Discovery of Dynamical Systems with LLM-Guided Adaptive Search

Recovering governing Ordinary Differential Equations (ODEs) from data is a central challenge in modeling dynamical systems across scientific domains. Existing approaches cast discovery as a static inference problem over fixed datasets, assuming that the observed trajectories are sufficiently informative. However, dynamical systems evolve over large state spaces, and limited data can make multiple equations observationally indistinguishable, leading to identifiability gaps and the recovery of incorrect governing equations. To address this, we introduce LLM-ACES, or LLM-guided Active Closed-loop Equation Search, a closed-loop framework that jointly optimizes symbolic hypothesis construction and adaptive data acquisition. In LLM-ACES, a large language model (LLM) proposes operator priors that partition the large search space into distinct regions, within which candidate equations are fit to the observed data. The disagreement among these candidates guides the acquisition of informative trajectories, creating a feedback loop that iteratively refines both the hypothesis space and the discovered dynamics. On 122 ODE systems spanning ODEBench and ODEBase, LLM-ACES achieves the lowest median NMSE, outperforming state-of-the-art baselines by several orders of magnitude while achieving a high symbolic accuracy of 46.2% and 52.4%, respectively. Our analysis further shows that LLM-ACES is sample-efficient, achieving better performance with one-tenth the data. Furthermore, LLM-ACES's feedback-driven data acquisition makes it robust to noise and recovers the correct symbolic structure, while baselines introduce spurious terms that fit the data locally but obscure the true governing relationships.

cs.LG↗
arXiv2026

Toward World Models for Epidemiology

World models have emerged as a unifying paradigm for learning latent dynamics, simulating counterfactual futures, and supporting planning under uncertainty. In this paper, we argue that computational epidemiology is a natural and underdeveloped setting for world models. This is because epidemic decision-making requires reasoning about latent disease burden, imperfect and policy-dependent surveillance signals, and intervention effects are mediated by adaptive human behavior. We introduce a conceptual framework for epidemiological world models, formulating epidemics as controlled, partially observed dynamical systems in which (i) the true epidemic state is latent, (ii) observations are noisy and endogenous to policy, and (iii) interventions act as sequential actions whose effects propagate through behavioral and social feedback. We present three case studies that illustrate why explicit world modeling is necessary for policy-relevant reasoning: strategic misreporting in behavioral surveillance, systematic delays in time-lagged signals such as hospitalizations and deaths, and counterfactual intervention analysis where identical histories diverge under alternative action sequences.

cs.LG↗
arXiv2026

Experience as a Compass: Multi-agent RAG with Evolving Orchestration and Agent Prompts

Multi-agent Retrieval-Augmented Generation (RAG), wherein each agent takes on a specific role, supports hard queries that require multiple steps and sources, or complex reasoning. Existing approaches, however, rely on static agent behaviors and fixed orchestration strategies, leading to brittle performance on diverse, multi-hop tasks. We identify two key limitations: the lack of continuously adaptive orchestration mechanisms and the absence of behavior-level learning for individual agents. To this end, we propose HERA, a hierarchical framework that jointly evolves multi-agent orchestration and role-specific agent prompts. At the global level, HERA optimizes query-specific agent topologies through reward-guided sampling and experience accumulation. At the local level, Role-Aware Prompt Evolution refines agent behaviors via credit assignment and dual-axes adaptation along operational and behavioral principles, enabling targeted, role-conditioned improvements. On six knowledge-intensive benchmarks, HERA achieves an average improvement of 38.69\% over recent baselines while maintaining robust generalization and token efficiency. Topological analyses reveal emergent self-organization, where sparse exploration yields compact, high-utility multi-agent networks, demonstrating both efficient coordination and robust reasoning.

cs.AI↗
arXiv2026

An Invariant Compiler for Neural ODEs in AI-Accelerated Scientific Simulation

Neural ODEs are increasingly used as continuous-time models for scientific and sensor data, but unconstrained neural ODEs can drift and violate domain invariants (e.g., conservation laws), yielding physically implausible solutions. In turn, this can compound error in long-horizon prediction and surrogate simulation. Existing solutions typically aim to enforce invariance by soft penalties or other forms of regularization, which can reduce overall error but do not guarantee that trajectories will not leave the constraint manifold. We introduce the invariant compiler, a framework that enforces invariants by construction: it treats invariants as first-class types and uses an LLM-driven compilation workflow to translate a generic neural ODE specification into a structure-preserving architecture whose trajectories remain on the admissible manifold in continuous time (and up to numerical integration error in practice). This compiler view cleanly separates what must be preserved (scientific structure) from what is learned from data (dynamics within that structure). It provides a systematic design pattern for invariant-respecting neural surrogates across scientific domains.

cs.LG↗
arXiv2026

Temporal Misalignment Attacks against Multimodal Perception in Autonomous Driving

Multimodal fusion (MMF) plays a critical role in the perception of autonomous driving, which primarily fuses camera and LiDAR streams for a comprehensive and efficient scene understanding. However, its strict reliance on precise temporal synchronization exposes it to new vulnerabilities. In this paper, we introduce DejaVu, an attack that exploits the in-vehicular network to manipulate the integrity of time and create subtle temporal misalignments, severely degrading downstream MMF-based perception tasks. Our comprehensive attack analysis across different models and datasets reveals the sensors' task-specific imbalanced sensitivities: object detection is overly dependent on LiDAR inputs, while object tracking is highly reliant on the camera inputs. Consequently, with a single-frame LiDAR delay, an attacker can reduce the car detection mAP by up to 88.5%, while with a three-frame camera delay, multiple object tracking accuracy (MOTA) for car drops by 73%. We further demonstrated two attack scenarios using an automotive Ethernet testbed for hardware-in-the-loop validation and the Autoware stack for end-to-end AD simulation, demonstrating the feasibility of the DejaVu attack and its severe impact, such as collisions and phantom braking. Our code and artifacts are publicly available at: https://github.com/shahriar0651/DejaVu.

cs.LG↗
arXiv2026

Agentic Framework for Epidemiological Modeling

Epidemic modeling is essential for public health planning, yet traditional approaches rely on fixed model classes that require manual redesign as pathogens, policies, and scenario assumptions evolve. We introduce EPIAGENT, an agentic framework that automatically synthesizes, calibrates, verifies, and refines epidemiological simulators by modeling disease progression as an iterative program synthesis problem. A central design choice is an explicit epidemiological flow graph intermediate representation that links scenario specifications to model structure and enables strong, modular correctness checks before code is generated. Verified flow graphs are then compiled into mechanistic models supporting interpretable parameter learning under physical and epidemiological constraints. Evaluation on epidemiological scenario case studies demonstrates that EPIAGENT captures complex growth dynamics and produces epidemiologically consistent counterfactual projections across varying vaccination and immune escape assumptions. Our results show that the agentic feedback loop prevents degeneration and significantly accelerates convergence toward valid models by mimicking professional expert workflows.

cs.LG↗
arXiv2026

HouseTS: A Large-Scale, Multimodal Spatiotemporal U.S. Housing Dataset and Benchmark

Accurate long-horizon house-price forecasting requires benchmarks that capture temporal dynamics together with time-varying local context. However, existing public resources remain fragmented: many datasets have limited spatial coverage, temporal depth, or multimodal alignment; the robustness of modern deep forecasters and time-series foundation models on housing data is not well characterized; and aerial imagery is rarely leveraged in a time-aware and interpretable manner at scale. To bridge these gaps, we present HouseTS (House Time Series), a multimodal spatiotemporal dataset for ZIP-code-level housing-market analysis, covering monthly signals from March 2012 to December 2023 across over 6,000 ZIP codes in 30 major U.S. metropolitan areas. HouseTS aligns monthly housing-market indicators, monthly POI dynamics, and annual census-based socioeconomic variables under a unified schema, and includes time-stamped annual aerial imagery. Building on HouseTS, we define standardized long-horizon forecasting tasks for univariate and multivariate prediction and benchmark 16 model families spanning statistical methods, classical machine learning, deep neural networks, and time-series foundation models in both zero-shot and fine-tuned modes. We also provide image-derived textual change annotations from multi-year aerial image sequences via a vision--language pipeline with LLM-as-judge and human verification to support scalable interpretability analyses. HouseTS is available on Kaggle, with code and documentation on GitHub.

cs.AI↗
arXiv2026

RAG without Forgetting: Continual Query-Infused Key Memory

Retrieval-augmented generation (RAG) systems commonly improve robustness via query-time adaptations such as query expansion and iterative retrieval. While effective, these approaches are inherently stateless: adaptations are recomputed for each query and discarded thereafter, precluding cumulative learning and repeatedly incurring inference-time cost. Index-side approaches like key expansion introduce persistence but rely on offline preprocessing or heuristic updates that are weakly aligned with downstream task utility, leading to semantic drift and noise accumulation. We propose Evolving Retrieval Memory (ERM), a training-free framework that transforms transient query-time gains into persistent retrieval improvements. ERM updates the retrieval index through correctness-gated feedback, selectively attributes atomic expansion signals to the document keys they benefit, and progressively evolves keys via stable, norm-bounded updates. We show that query and key expansion are theoretically equivalent under standard similarity functions and prove convergence of ERM's selective updates, amortizing optimal query expansion into a stable index with zero inference-time overhead. Experiments on BEIR and BRIGHT across 13 domains demonstrate consistent gains in retrieval and generation, particularly on reasoning-intensive tasks, at native retrieval speed.

cs.IR↗
arXiv2026

LLMs as Layout Designers: Enhanced Spatial Reasoning for Content-Aware Layout Generation

While Large Language Models (LLMs) have demonstrated impressive reasoning and planning abilities in textual domains and can effectively follow instructions for complex tasks, their ability to understand and manipulate spatial relationships remains limited. Such capabilities are crucial for content-aware graphic layout design, where the goal is to arrange heterogeneous elements onto a canvas so that final design remains visually balanced and structurally feasible. This problem requires precise coordination of placement, alignment, and structural organization of multiple elements within a constrained visual space. To address this limitation, we introduce LaySPA, a reinforcement learning-based framework that augments LLM-based agents with explicit spatial reasoning capabilities for layout design. LaySPA employs hybrid reward signals that jointly capture geometric constraints, structural fidelity, and visual quality, enabling agents to navigate the canvas, model inter-element relationships, and optimize spatial arrangements. Through group-relative policy optimization, the agent generates content-aware layouts that reflect salient regions, respect spatial constraints, and produces an interpretable reasoning trace explaining placement decisions and a structured layout specification. Experimental results show that LaySPA substantially improves the generation of structurally valid and visually appealing layouts, outperforming larger general-purpose LLMs and achieving performance comparable to state-of-the-art specialized layout models.

cs.AI↗
arXiv2026

Exploring LLMs for Scientific Information Extraction Using The SciEx Framework

Large language models (LLMs) are increasingly touted as powerful tools for automating scientific information extraction. However, existing methods and tools often struggle with the realities of scientific literature: long-context documents, multi-modal content, and reconciling varied and inconsistent fine-grained information across multiple publications into standardized formats. These challenges are further compounded when the desired data schema or extraction ontology changes rapidly, making it difficult to re-architect or fine-tune existing systems. We present SciEx, a modular and composable framework that decouples key components including PDF parsing, multi-modal retrieval, extraction, and aggregation. This design streamlines on-demand data extraction while enabling extensibility and flexible integration of new models, prompting strategies, and reasoning mechanisms. We evaluate SciEx on datasets spanning three scientific topics for its ability to extract fine-grained information accurately and consistently. Our findings provide practical insights into both the strengths and limitations of current LLM-based pipelines.

cs.AI↗
arXiv2026

Utilizing Metadata for Better Retrieval-Augmented Generation

Retrieval-Augmented Generation systems depend on retrieving semantically relevant document chunks to support accurate, grounded outputs from large language models. In structured and repetitive corpora such as regulatory filings, chunk similarity alone often fails to distinguish between documents with overlapping language. Practitioners often flatten metadata into input text as a heuristic, but the impact and trade-offs of this practice remain poorly understood. We present a systematic study of metadata-aware retrieval strategies, comparing plain-text baselines with approaches that embed metadata directly. Our evaluation spans metadata-as-text (prefix and suffix), a dual-encoder unified embedding that fuses metadata and content in a single index, dual-encoder late-fusion retrieval, and metadata-aware query reformulation. Across multiple retrieval metrics and question types, we find that prefixing and unified embeddings consistently outperform plain-text baselines, with the unified at times exceeding prefixing while being easier to maintain. Beyond empirical comparisons, we analyze embedding space, showing that metadata integration improves effectiveness by increasing intra-document cohesion, reducing inter-document confusion, and widening the separation between relevant and irrelevant chunks. Field-level ablations show that structural cues provide strong disambiguating signals. Our code, evaluation framework, and the RAGMATE-10K dataset are publicly hosted.

cs.IR↗