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Narges Ghareghani

Publications and source records attributed to Narges Ghareghani.

8 recordsLinked to original sources

Algorithms and Hardness for Geodetic Set on Tree-like Digraphs

In the GEODETIC SET problem, an input is a (di)graph $G$ and integer $k$, and the objective is to decide whether there exists a vertex subset $S$ of size $k$ such that any vertex in $V(G)\setminus S$ lies on a shortest (directed) path between two vertices in $S$. The problem has been studied on undirected and directed graphs from both algorithmic and graph-theoretical perspectives. We focus on directed graphs and prove that GEODETIC SET admits a polynomial-time algorithm on ditrees, that is, digraphs with possible 2-cycles when the underlying undirected graph is a tree (after deleting possible parallel edges). This positive result naturally leads us to investigate cases where the underlying undirected graph is "close to a tree". Towards this, we show that GEODETIC SET on digraphs without 2-cycles and whose underlying undirected graph has feedback edge set number $\textsf{fen}$, can be solved in time $2^{\mathcal{O}(\textsf{fen})} \cdot n^{\mathcal{O}(1)}$, where $n$ is the number of vertices. To complement this, we prove that the problem remains NP-hard on DAGs (which do not contain 2-cycles) even when the underlying undirected graph has constant feedback vertex set number and constant pathwidth. Our last result significantly strengthens the result of Araújo and Arraes [Discrete Applied Mathematics, 2022] that the problem is NP-hard on DAGs when the underlying undirected graph is either bipartite, cobipartite or split.

cs.DS

Enumeration of Factor Occurrences in $k$-Bonacci Words over an Infinite Alphabet

We study the $k$-Bonacci word over the infinite alphabet $\mathbb{N}$. Since the alphabet is infinite, the usual factor complexity is infinite and does not provide any information. We therefore investigate factor occurrence statistics in the finite iterates. For $k \ge 3$, we obtain closed forms for the generating functions (with respect to the iteration index) that count the number of occurrences of an arbitrary digit in the $n$th iterate. We then characterize the complete set of length-$2$ factors occurring in the infinite word and compute, for each such factor, a closed form for the generating function encoding its number of occurrences across all finite iterates. As a consequence, the associated counting sequences satisfy uniform $(k\!-\!1)$-step Fibonacci-type recurrences and admit a description in terms of $(k\!-\!1)$-Bonacci enumeration phenomena, including self-convolution structures.

math.CO

Extremal digraphs for open neighbourhood location-domination and identifying codes

A set $S$ of vertices of a digraph $D$ is called an open neighbourhood locating-dominating set if every vertex in $D$ has an in-neighbour in $S$, and for every pair $u,v$ of vertices of $D$, there is a vertex in $S$ that is an in-neighbour of exactly one of $u$ and $v$. The smallest size of an open neighbourhood locating-dominating set of a digraph $D$ is denoted by $γ_{OL}(D)$. We study the class of digraphs $D$ whose only open neighbourhood locating-dominating set consists of the whole set of vertices, in other words, $γ_{OL}(D)$ is equal to the order of $D$. We call those digraphs extremal. By considering digraphs with loops allowed, our definition also applies to the related (and more widely studied) concept of identifying codes. We extend previous studies from the literature for both open neighbourhood locating-dominating sets and identifying codes of both undirected and directed graphs. These results all correspond to studying open neighbourhood locating-dominating sets on special classes of digraphs. To do so, we prove general structural properties of extremal digraphs, and we describe how they can all be constructed. We then use these properties to give new proofs of several known results from the literature. We also give a recursive and constructive characterization of the extremal di-trees (digraphs whose underlying undirected graph is a tree).

math.CO

Characterizing extremal graphs for open neighbourhood location-domination

An open neighbourhood locating-dominating set is a set $S$ of vertices of a graph $G$ such that each vertex of $G$ has a neighbour in $S$, and for any two vertices $u,v$ of $G$, there is at least one vertex in $S$ that is a neighbour of exactly one of $u$ and $v$. We characterize those graphs whose only open neighbourhood locating-dominating set is the whole set of vertices. More precisely, we prove that these graphs are exactly the graphs all whose connected components are half-graphs (a half-graph is a special bipartite graph with both parts of the same size, where each part can be ordered so that the open neighbourhoods of consecutive vertices differ by exactly one vertex). This corrects a wrong characterization from the literature.

math.CO

Generalized Gapped-kmer Filters for Robust Frequency Estimation

In this paper, we study the generalized gapped k-mer filters and derive a closed form solution for their coefficients. We consider nonnegative integers $\ell$ and $k$, with $k\leq \ell$, and an $\ell$-tuple $B=(b_1,\ldots,b_{\ell})$ of integers $b_i\geq 2$, $i=1,\ldots,\ell$. We introduce and study an incidence matrix $A=A_{\ell,k;B}$. We develop a Möbius-like function $ν_B$ which helps us to obtain closed forms for a complete set of mutually orthogonal eigenvectors of $A^{\top} A$ as well as a complete set of mutually orthogonal eigenvectors of $AA^{\top}$ corresponding to nonzero eigenvalues. The reduced singular value decomposition of $A$ and combinatorial interpretations for the nullity and rank of $A$, are among the consequences of this approach. We then combine the obtained formulas, some results from linear algebra, and combinatorial identities of elementary symmetric functions and $ν_B$, to provide the entries of the Moore-Penrose pseudo-inverse matrix $A^{+}$ and the Gapped k-mer filter matrix $A^{+} A$.

cs.DM

On square factors and critical factors of $k$-bonacci words on infinite alphabet

For any integer $k>2$, the infinite $k$-bonacci word $W^{(k)}$, on the infinite alphabet is defined as the fixed point of the morphism $φ_k:\mathbb{N}\rightarrow \mathbb{N}^2 \cup \mathbb{N}$, where \begin{equation*} φ_k(ki+j) = \left\{ \begin{array}{ll} (ki)(ki+j+1) & \text{if } j = 0,\cdots ,k-2, (ki+j+1)& \text{if } j =k-1. \end{array} \right. \end{equation*} The finite $k$-bonacci word $W^{(k)}_n$ is then defined as the prefix of $W^{(k)}$ whose length is the $(n+k)$-th $k$-bonacci number. We obtain the structure of all square factors occurring in $W^{(k)}$. Moreover, we prove that the critical exponent of $W^{(k)}$ is $3-\frac{3}{2^k-1}$. Finally, we provide all critical factors of $W^{(k)}$.

math.CO

A note on bipartite graphs whose [1, k]-domination number equal to their number of vertices

A subset $D$ of the vertex set $V$ of a graph $G$ is called an $[1,k]$-dominating set if every vertex from $V-D$ is adjacent to at least one vertex and at most $k$ vertices of $D$. A $[1,k]$-dominating set with the minimum number of vertices is called a $γ_{[1,k]}$-set and the number of its vertices is the $[1,k]$-domination number $γ_{[1,k]}(G)$ of $G$. In this short note we show that the decision problem whether $γ_{[1,k]}(G)=n$ is an $NP$-hard problem, even for bipartite graphs. Also, a simple construction of a bipartite graph $G$ of order $n$ satisfying $γ_{[1,k]}(G)=n$ is given for every integer $n\geq (k+1)(2k+3)$.

math.CO

Some properties of $k$-bonacci words on infinite alphabet

The Fibonacci word $W$ on an infinite alphabet was introduced in [Zhang et al., Electronic J. Combinatorics 2017 24(2), 2-52] as a fixed point of the morphism $2i\rightarrow (2i)(2i+1)$, $(2i+1) \rightarrow (2i+2)$, $i\geq 0$. Here, for any integer $k>2$, we define the infinite $k$-bonacci word $W^{(k)}$ on the infinite alphabet as the fixed point of the morphism $φ_k$ on the alphabet $\mathbb{N}$ defined for any $i\geq 0$ and any $0\leq j\leq k-1$, as \begin{equation*} φ_k(ki+j) = \left\{ \begin{array}{ll} (ki)(ki+j+1) & \text{if } j = 0,\cdots ,k-2,\\ (ki+j+1)& \text{otherwise}. \end{array} \right. \end{equation*} We consider the sequence of finite words $(W^{(k)}_n)_{n\geq 0}$, where $W^{(k)}_n$ is the prefix of $W^{(k)}$ whose length is the $(n+k)$-th $k$-bonacci number. We then provide a recursive formula for the number of palindromes occur in different positions of $W^{(k)}_n$. Finally, we obtain the structure of all palindromes occurring in $W^{(k)}$ and based on this, we compute the palindrome complexity of $W^{(k)}$, for any $k>2$.

math.CO