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Nathaniel Saul

Publications and source records attributed to Nathaniel Saul.

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Stitch Fix for Mapper and Topological Gains

The mapper construction is a powerful tool from topological data analysis that is designed for the analysis and visualization of multivariate data. In this paper, we investigate a method for stitching a pair of univariate mappers together into a bivariate mapper, and study topological notions of information gains, referred to as topological gains, during such a process. We further provide implementations that visualize such topological gains for mapper graphs.

cs.CG

Steinhaus Filtration and Stable Paths in the Mapper

We define a new filtration called the Steinhaus filtration built from a single cover based on a generalized Steinhaus distance, a generalization of Jaccard distance. The homology persistence module of a Steinhaus filtration with infinitely many cover elements may not be $q$-tame, even when the covers are in a totally bounded space. While this may pose a challenge to derive stability results, we show that the Steinhaus filtration is stable when the cover is finite. We show that while the \v{C}ech and Steinhaus filtrations are not isomorphic in general, they are isomorphic for a finite point set in dimension one. Furthermore, the VR filtration completely determines the $1$-skeleton of the Steinhaus filtration in arbitrary dimension. We then develop a language and theory for stable paths within the Steinhaus filtration. We demonstrate how the framework can be applied to several applications where a standard metric may not be defined but a cover is readily available. We introduce a new perspective for modeling recommendation system datasets. As an example, we look at a movies dataset and we find the stable paths identified in our framework represent a sequence of movies constituting a gentle transition and ordering from one genre to another. For explainable machine learning, we apply the Mapper algorithm for model induction by building a filtration from a single Mapper complex, and provide explanations in the form of stable paths between subpopulations. For illustration, we build a Mapper complex from a supervised machine learning model trained on the FashionMNIST dataset. Stable paths in the Steinhaus filtration provide improved explanations of relationships between subpopulations of images.

cs.LG