arXiv subjects

Neelay Shah

Publications and source records attributed to Neelay Shah.

3 recordsLinked to original sources

arXiv2026

Atlas 2 -- Foundation models for clinical deployment

Pathology foundation models substantially advanced the possibilities in computational pathology --- yet tradeoffs in terms of performance, robustness, and computational requirements remained, which limited their clinical deployment. In this report, we present Atlas 2, Atlas 2-B, and Atlas 2-S, three pathology vision foundation models which bridge these shortcomings by showing state-of-the-art prediction performance, robustness, and resource efficiency in a comprehensive evaluation across eighty public benchmarks. Our models were trained on the largest pathology foundation model dataset to date comprising 5.5 million histopathology whole slide images, collected from three medical institutions Charit\'e - Universit\"atsmedizin Berlin, LMU Munich, and Mayo Clinic.

cs.CV↗

arXiv2025

Atlas: A Novel Pathology Foundation Model by Mayo Clinic, Charit\'e, and Aignostics

Recent advances in digital pathology have demonstrated the effectiveness of foundation models across diverse applications. In this report, we present Atlas, a novel vision foundation model based on the RudolfV approach. Our model was trained on a dataset comprising 1.2 million histopathology whole slide images, collected from two medical institutions: Mayo Clinic and Charit\'e - Universt\"atsmedizin Berlin. Comprehensive evaluations show that Atlas achieves state-of-the-art performance across twenty-one public benchmark datasets, even though it is neither the largest model by parameter count nor by training dataset size.

cs.CV↗

arXiv2020

KD-Lib: A PyTorch library for Knowledge Distillation, Pruning and Quantization

In recent years, the growing size of neural networks has led to a vast amount of research concerning compression techniques to mitigate the drawbacks of such large sizes. Most of these research works can be categorized into three broad families : Knowledge Distillation, Pruning, and Quantization. While there has been steady research in this domain, adoption and commercial usage of the proposed techniques has not quite progressed at the rate. We present KD-Lib, an open-source PyTorch based library, which contains state-of-the-art modular implementations of algorithms from the three families on top of multiple abstraction layers. KD-Lib is model and algorithm-agnostic, with extended support for hyperparameter tuning using Optuna and Tensorboard for logging and monitoring. The library can be found at - https://github.com/SforAiDl/KD_Lib.

cs.LG↗