arXiv subjects

Niamh O'Neill

Publications and source records attributed to Niamh O'Neill.

8 recordsLinked to original sources

arXiv2026

Distilling first-principles accuracy into compact machine learning potentials for condensed-phase chemistry

Accurate machine learning interatomic potentials (MLIPs) have made first-principles-quality potential energy surfaces increasingly accessible for condensed-phase chemistry, but their inference cost can still limit the sampling needed to compute experimentally relevant observables. In this work, we combine transfer learning and knowledge distillation to construct compact "student" models that retain the accuracy of much larger "teacher" models obtained by applying transfer learning to foundation models. The resulting students reduce production simulation cost by roughly an order of magnitude, making high-accuracy sampling practical for challenging condensed-phase problems. We demonstrate this across three problems of increasing sampling complexity: finite-temperature NPT simulations of ice Ih, classical and path-integral simulations of liquid water over 240-370 K, and path-integral umbrella-sampling simulations of water dissociation at the anatase TiO2(101)/water interface. In all cases, the distilled students reproduce the target observables of their teachers more reliably than models of the same size trained directly on the limited reference data. The liquid-water student, distilled from a Δ-learned CCSD(T)-quality teacher, reproduces thermodynamic, structural, transport, and nuclear quantum properties over the full temperature range studied. At the TiO2/water interface, distillation makes PIMD umbrella sampling practical and shows that nuclear quantum effects lower the dissociation barrier by roughly 2 kcal/mol and shift the molecular-dissociated free energy difference into quantitative agreement with recent solid-state 17O NMR measurements. Our work demonstrates how knowledge distillation can make accurate MLIPs practical for the sampling methods needed to connect condensed-phase reaction thermodynamics with experiment, notably for interfacial chemistry and catalysis.

physics.chem-ph↗

arXiv2026

From Accurate Quantum Chemistry to Converged Thermodynamics for Ion Pairing in Solution

Quantitative prediction of thermodynamic properties in solution is essential for translating atomistic simulations into reliable chemical insight. As an exemplar system, the behaviour of CaCO$_3$ in water has been widely studied to understand its mineralization in seawater, with potential implications for carbon-capture strategies. However, making accurate computational predictions has been a long-standing challenge, requiring both highly accurate electronic structure methods and extensive statistical sampling. Here, we combine advances in machine learning and electronic structure theory to fully resolve the ion pairing free energy of CaCO$_3$ with explicit solvation. We show that achieving quantitative agreement with experiment requires going beyond the standard density functional theory up to the "gold-standard" coupled cluster theory with single, double, and perturbative triple excitations [CCSD(T)]. We generate a set of systematically improvable models, enabling reliable insights into the initial association mechanism of Ca and CO$_3$ ions prior to nucleation while fully quantifying enthalpic and entropic effects. Our results demonstrate that CCSD(T)-level thermodynamic predictions of complex aqueous systems can now be routinely achieved.

physics.chem-ph↗

arXiv2026

Cutting Through the Noise: On-the-fly Outlier Detection for Robust Training of Machine Learning Interatomic Potentials

The accuracy of machine learning interatomic potentials suffers from reference data that contains numerical noise. Often originating from unconverged or inconsistent electronic-structure calculations, this noise is challenging to identify. Existing mitigation strategies such as manual filtering or iterative refinement of outliers, require either substantial expert effort or multiple expensive retraining cycles, making them difficult to scale to large datasets. Here, we introduce an on-the-fly outlier detection scheme that automatically down-weights noisy samples, without requiring additional reference calculations. By tracking the loss distribution via an exponential moving average, this unsupervised method identifies outliers throughout a single training run. We show that this approach prevents overfitting and matches the performance of iterative refinement baselines with significantly reduced overhead. The method's effectiveness is demonstrated by recovering accurate physical observables for liquid water from unconverged reference data, including diffusion coefficients. Furthermore, we validate its scalability by training a foundation model for organic chemistry on the SPICE dataset, where it reduces energy errors by a factor of three. This framework provides a simple, automated solution for training robust models on imperfect datasets across dataset sizes.

stat.ML↗

arXiv2025

A foundation model for atomistic materials chemistry

Atomistic simulations of matter, especially those that leverage first-principles (ab initio) electronic structure theory, provide a microscopic view of the world, underpinning much of our understanding of chemistry and materials science. Over the last decade or so, machine-learned force fields have transformed atomistic modeling by enabling simulations of ab initio quality over unprecedented time and length scales. However, early ML force fields have largely been limited by: (i) the substantial computational and human effort of developing and validating potentials for each particular system of interest; and (ii) a general lack of transferability from one chemical system to the next. Here we show that it is possible to create a general-purpose atomistic ML model, trained on a public dataset of moderate size, that is capable of running stable molecular dynamics for a wide range of molecules and materials. We demonstrate the power of the MACE-MP-0 model - and its qualitative and at times quantitative accuracy - on a diverse set of problems in the physical sciences, including properties of solids, liquids, gases, chemical reactions, interfaces and even the dynamics of a small protein. The model can be applied out of the box as a starting or "foundation" model for any atomistic system of interest and, when desired, can be fine-tuned on just a handful of application-specific data points to reach ab initio accuracy. Establishing that a stable force-field model can cover almost all materials changes atomistic modeling in a fundamental way: experienced users get reliable results much faster, and beginners face a lower barrier to entry. Foundation models thus represent a step towards democratising the revolution in atomic-scale modeling that has been brought about by ML force fields.

physics.chem-ph↗

arXiv2025

Towards Routine Condensed Phase Simulations with Delta-Learned Coupled Cluster Accuracy: Application to Liquid Water

Simulating liquid water to an accuracy that matches its wealth of available experimental data requires both precise electronic structure methods and reliable sampling of nuclear (quantum) motion. This is challenging because applying the electronic structure method of choice - coupled cluster theory with single, double and perturbative triple excitations [CCSD(T)] - to condensed phase systems is currently limited by its computational cost and complexity. Recent tour-de-force efforts have demonstrated that this accuracy can indeed bring simulated liquid water into close agreement with experiment using machine learning potentials (MLPs). However, achieving this remains far from routine, requiring large datasets and significant computational cost. In this work, we introduce a practical approach that combines developments in MLPs with local correlation approximations to enable routine CCSD(T)-level simulations of liquid water. When combined with nuclear quantum effects, we achieve agreement to experiments for structural and transport properties. Crucially, this approach extends beyond constant volume to constant pressure simulations, allowing fundamental properties such as the density to now be predicted by MLP-based CCSD(T) models. Importantly, the approach also handles constant pressure simulations, enabling MLP-based CCSD(T) models to predict isothermal-isobaric bulk properties, such as water's density maximum in close agreement with experiment. Encompassing tests across electronic structure, datasets and MLP architecture, this work provides a practical blueprint towards routinely developing CCSD(T)-based MLPs for the condensed phase.

physics.chem-ph↗

arXiv2024

Introduction to machine learning potentials for atomistic simulations

Machine learning potentials have revolutionised the field of atomistic simulations in recent years and are becoming a mainstay in the toolbox of computational scientists. This paper aims to provide an overview and introduction into machine learning potentials and their practical application to scientific problems. We provide a systematic guide for developing machine learning potentials, reviewing chemical descriptors, regression models, data generation and validation approaches. We begin with an emphasis on the earlier generation of models, such as high-dimensional neural network potentials (HD-NNPs) and Gaussian approximation potential (GAP), to provide historical perspective and guide the reader towards the understanding of recent developments, which are discussed in detail thereafter. Furthermore, we refer to relevant expert reviews, open-source software, and practical examples - further lowering the barrier to exploring these methods. The paper ends with selected showcase examples, highlighting the capabilities of machine learning potentials and how they can be applied to push the boundaries in atomistic simulations.

physics.chem-ph↗

arXiv2024

To Pair or not to Pair? Machine-Learned Explicitly-Correlated Electronic Structure for NaCl in Water

The extent of ion pairing in solution is an important phenomenon to rationalise transport and thermodynamic properties of electrolytes. A fundamental measure of this pairing is the potential of mean force (PMF) between solvated ions. The relative stabilities of the paired and solvent shared states in the PMF and the barrier between them are highly sensitive to the underlying potential energy surface. However direct application of accurate electronic structure methods is challenging, since long simulations are required. We develop wavefunction based machine learning potentials with the Random Phase Approximation (RPA) and second order Moller-Plesset (MP2) perturbation theory for the prototypical system of Na and Cl ions in water. We show both methods in agreement, predicting the paired and solvent shared states to have similar energies (within 0.2 kcal/mol). We also provide the same benchmarks for different DFT functionals as well as insight into the PMF based on simple analyses of the interactions in the system.

physics.chem-ph↗

arXiv2022

Crumbling Crystals: On the Dissolution Mechanism of NaCl in Water

Life on Earth depends upon the dissolution of ionic salts in water, particularly NaCl. However, an atomistic scale understanding of the process remains elusive. Simulations lend themselves conveniently to studying dissolution since they provide the spatio-temporal resolution that can be difficult to obtain experimentally. Nevertheless, the complexity of various inter- and intra-molecular interactions require careful treatment and long time scale simulations, both of which are typically hindered by computational expense. Here, we use advances in machine learning potential methodology to resolve for the first time at an ab initio level of theory the dissolution mechanism of NaCl in water. The picture that emerges is that of a steady ion-wise unwrapping of the crystal preceding its rapid disintegration, reminiscent of crumbling. The onset of crumbling can be explained by a strong increase in the ratio of the surface to volume of the crystal. Overall, dissolution is comprised of a series of highly dynamical microscopic sub-processes, resulting in an inherently stochastic mechanism. These atomistic level insights now pave the way for a general understanding of dissolution mechanisms in other crystals, and the methodology is primed for more complex systems of recent interest such as water/salt interfaces under flow and salt crystals under confinement.

physics.chem-ph↗