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Nico Coallier

Publications and source records attributed to Nico Coallier.

3 recordsLinked to original sources

Improved Monitoring of Honey bee Colony Strength via Audio IoT Sensors, Modulation Tensorgrams and Recurrent Neural Networks

Honey bees (Apis mellifera) play a crucial role in agriculture and ecosystem stability as key pollinators of crops and wild plants. As such, monitoring hive strength remotely with Internet of Things (IoT) sensors has become a crucial task. Previously, handcrafted features extracted from the modulation spectrum of audio IoT devices were shown to improve acoustic monitoring of colony strength. In this paper, we hypothesize that important discriminative information is present in the temporal dynamics of the modulation spectrum, but this information is discarded with prior methods. As such, we explore the use of a new modulation tensorgram where the time dimension is kept. This new representation is used as input to a convolutional neural network (CNN) and a convolutional recurrent deep neural networks (CRDNN). Using the public UrBAN dataset, which contains more than 3,000 hours of beehive audio recordings, we show that the proposed method improves both accuracy and cross-hive generalizability over prior benchmark methods, and the results further suggest improved robustness to noisy in-the-wild recording conditions. We use saliency maps and gradient-weighted class activation maps for explainability and show the importance of the modulation spectral temporal dynamics for the task at hand. Overall, our results suggest that accurate, generalizable, and robust acoustic monitoring of honey bee colony strength is possible.

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UrBAN: Urban Beehive Acoustics and PheNotyping Dataset

In this paper, we present a multimodal dataset obtained from a honey bee colony in Montréal, Quebec, Canada, spanning the years of 2021 to 2022. This apiary comprised 10 beehives, with microphones recording more than 2000 hours of high quality raw audio, and also sensors capturing temperature, and humidity. Periodic hive inspections involved monitoring colony honey bee population changes, assessing queen-related conditions, and documenting overall hive health. Additionally, health metrics, such as Varroa mite infestation rates and winter mortality assessments were recorded, offering valuable insights into factors affecting hive health status and resilience. In this study, we first outline the data collection process, sensor data description, and dataset structure. Furthermore, we demonstrate a practical application of this dataset by extracting various features from the raw audio to predict colony population using the number of frames of bees as a proxy.

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MSPB: a longitudinal multi-sensor dataset with phenotypic trait measurements from honey bees

We present a longitudinal multi-sensor dataset collected from honey bee colonies (Apis mellifera) with rich phenotypic measurements. Data were continuously collected between May-2020 and April-2021 from 53 hives located at two apiaries in Québec, Canada. The sensor data included audio features, temperature, and relative humidity. The phenotypic measurements contained beehive population, number of brood cells (eggs, larva and pupa), Varroa destructor infestation levels, defensive and hygienic behaviors, honey yield, and winter mortality. Our study is amongst the first to provide a wide variety of phenotypic trait measurements annotated by apicultural science experts, which facilitate a broader scope of analysis. We first summarize the data collection procedure, sensor data pre-processing steps, and data composition. We then provide an overview of the phenotypic data distribution as well as a visualization of the sensor data patterns. Lastly, we showcase several hive monitoring applications based on sensor data analysis and machine learning, such as winter mortality prediction, hive population estimation, and the presence of an active and laying queen.

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