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Nicole Wolter

Publications and source records attributed to Nicole Wolter.

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Estimating household contact matrices structure from easily collectable metadata

Contact matrices are a commonly adopted data representation, used to develop compartmental models for epidemic spreading, accounting for the contact heterogeneities across age groups. Their estimation, however, is generally time and effort consuming and model-driven strategies to quantify the contacts are often needed. In this article we focus on household contact matrices, describing the contacts among the members of a family and develop a parametric model to describe them. This model combines demographic and easily quantifiable survey-based data and is tested on high resolution proximity data collected in two sites in South Africa. Given its simplicity and interpretability, we expect our method to be easily applied to other contexts as well and we identify relevant questions that need to be addressed during the data collection procedure.

physics.soc-ph

Expanding IceCube GPU computing into the Clouds

The IceCube collaboration relies on GPU compute for many of its needs, including ray tracing simulation and machine learning activities. GPUs are however still a relatively scarce commodity in the scientific resource provider community, so we expanded the available resource pool with GPUs provisioned from the commercial Cloud providers. The provisioned resources were fully integrated into the normal IceCube workload management system through the Open Science Grid (OSG) infrastructure and used CloudBank for budget management. The result was an approximate doubling of GPU wall hours used by IceCube over a period of 2 weeks, adding over 3.1 fp32 EFLOP hours for a price tag of about $58k. This paper describes the setup used and the operational experience.

cs.DC