arXiv subjects

Nikolaos Bakalos

Publications and source records attributed to Nikolaos Bakalos.

7 recordsLinked to original sources

arXiv2026

H2: A Dual Hybrid Semantic Data Lake Architecture for Medical Data Harmonization with Human-In-the-Loop verified, LLM Driven Metadata Annotation System

Medical data, by its nature, exhibit a high degree of heterogeneity on multiple levels ranging from (a) different modalities like images, text and time series, (b) diverse tabular schemata introduced by institutions and (c) completely unstructured textual information data provided by healthcare professionals. Data lakes are often used in medical data storage to consolidate all heterogeneous diverse data in a single, central location, where it can be saved "as is", without the need to impose a schema like a data warehouse does. Despite their flexibility, though, data lakes are notorious for the "data swamp" failure. Thus, providing a reliable data harmonization mechanism through metadata, without compromising integrity or flexibility, is a real challenge. To this end, knowledge graphs have attracted attention since they provide a dynamic way to depict relationships without a rigid schema-on-write approach. Additionally, another rigorous task relies on the interoperability of data: application of appropriate ML techniques on such a diverse nature of data is not an easy task, as a domain expert must decide the efficacy of a method to a specific data type or dataset. Metadata annotation can aid by tagging applicable operations, however this requires manual intervention, not to mention the plethora of existing datasets which lack such information. To tackle both challenges, in this paper, we propose a semantic data lake architecture that promotes data harmonization and incorporates a generative annotation process (i.e. LLMs) of non-labeled metadata collections to support the application of meaningful ML techniques. Building on top of this approach, we create a higher level of knowledge, identifying suitability of data with respect to applicable ML operations based on their data nature...

cs.AI↗

arXiv2024

A vision-based framework for human behavior understanding in industrial assembly lines

This paper introduces a vision-based framework for capturing and understanding human behavior in industrial assembly lines, focusing on car door manufacturing. The framework leverages advanced computer vision techniques to estimate workers' locations and 3D poses and analyze work postures, actions, and task progress. A key contribution is the introduction of the CarDA dataset, which contains domain-relevant assembly actions captured in a realistic setting to support the analysis of the framework for human pose and action analysis. The dataset comprises time-synchronized multi-camera RGB-D videos, motion capture data recorded in a real car manufacturing environment, and annotations for EAWS-based ergonomic risk scores and assembly activities. Experimental results demonstrate the effectiveness of the proposed approach in classifying worker postures and robust performance in monitoring assembly task progress.

cs.CV↗

arXiv2024

Learning using privileged information for segmenting tumors on digital mammograms

Limited amount of data and data sharing restrictions, due to GDPR compliance, constitute two common factors leading to reduced availability and accessibility when referring to medical data. To tackle these issues, we introduce the technique of Learning Using Privileged Information. Aiming to substantiate the idea, we attempt to build a robust model that improves the segmentation quality of tumors on digital mammograms, by gaining privileged information knowledge during the training procedure. Towards this direction, a baseline model, called student, is trained on patches extracted from the original mammograms, while an auxiliary model with the same architecture, called teacher, is trained on the corresponding enhanced patches accessing, in this way, privileged information. We repeat the student training procedure by providing the assistance of the teacher model this time. According to the experimental results, it seems that the proposed methodology performs better in the most of the cases and it can achieve 10% higher F1 score in comparison with the baseline.

cs.CV↗

arXiv2023

A Few-Shot Attention Recurrent Residual U-Net for Crack Segmentation

Recent studies indicate that deep learning plays a crucial role in the automated visual inspection of road infrastructures. However, current learning schemes are static, implying no dynamic adaptation to users' feedback. To address this drawback, we present a few-shot learning paradigm for the automated segmentation of road cracks, which is based on a U-Net architecture with recurrent residual and attention modules (R2AU-Net). The retraining strategy dynamically fine-tunes the weights of the U-Net as a few new rectified samples are being fed into the classifier. Extensive experiments show that the proposed few-shot R2AU-Net framework outperforms other state-of-the-art networks in terms of Dice and IoU metrics, on a new dataset, named CrackMap, which is made publicly available at https://github.com/ikatsamenis/CrackMap.

cs.CV↗

arXiv2022

Transferability limitations for Covid 3D Localization Using SARS-CoV-2 segmentation models in 4D CT images

In this paper, we investigate the transferability limitations when using deep learning models, for semantic segmentation of pneumonia-infected areas in CT images. The proposed approach adopts a 4 channel input; 3 channels based on Hounsfield scale, plus one channel (binary) denoting the lung area. We used 3 different, publicly available, CT datasets. If the lung area mask was not available, a deep learning model generates a proxy image. Experimental results suggesting that transferability should be used carefully, when creating Covid segmentation models; retraining the model more than one times in large sets of data results in a decrease in segmentation accuracy.

eess.IV↗

arXiv2022

Evaluating Transferability for Covid 3D Localization Using CT SARS-CoV-2 segmentation models

Recent studies indicate that detecting radiographic patterns on CT scans can yield high sensitivity and specificity for Covid-19 localization. In this paper, we investigate the appropriateness of deep learning models transferability, for semantic segmentation of pneumonia-infected areas in CT images. Transfer learning allows for the fast initialization/reutilization of detection models, given that large volumes of training data are not available. Our work explores the efficacy of using pre-trained U-Net architectures, on a specific CT data set, for identifying Covid-19 side-effects over images from different datasets. Experimental results indicate improvement in the segmentation accuracy of identifying Covid-19 infected regions.

eess.IV↗

arXiv2020

Space-Time Domain Tensor Neural Networks: An Application on Human Pose Classification

Recent advances in sensing technologies require the design and development of pattern recognition models capable of processing spatiotemporal data efficiently. In this study, we propose a spatially and temporally aware tensor-based neural network for human pose classification using three-dimensional skeleton data. Our model employs three novel components. First, an input layer capable of constructing highly discriminative spatiotemporal features. Second, a tensor fusion operation that produces compact yet rich representations of the data, and third, a tensor-based neural network that processes data representations in their original tensor form. Our model is end-to-end trainable and characterized by a small number of trainable parameters making it suitable for problems where the annotated data is limited. Experimental evaluation of the proposed model indicates that it can achieve state-of-the-art performance.

cs.LG↗