arXiv subjects

Nuno Moniz

Publications and source records attributed to Nuno Moniz.

At least 37 records · Page 2Linked to original sources

arXiv2024

NGQA: A Nutritional Graph Question Answering Benchmark for Personalized Health-aware Nutritional Reasoning

Diet plays a critical role in human health, yet tailoring dietary reasoning to individual health conditions remains a major challenge. Nutrition Question Answering (QA) has emerged as a popular method for addressing this problem. However, current research faces two critical limitations. On one hand, the absence of datasets involving user-specific medical information severely limits \textit{personalization}. This challenge is further compounded by the wide variability in individual health needs. On the other hand, while large language models (LLMs), a popular solution for this task, demonstrate strong reasoning abilities, they struggle with the domain-specific complexities of personalized healthy dietary reasoning, and existing benchmarks fail to capture these challenges. To address these gaps, we introduce the Nutritional Graph Question Answering (NGQA) benchmark, the first graph question answering dataset designed for personalized nutritional health reasoning. NGQA leverages data from the National Health and Nutrition Examination Survey (NHANES) and the Food and Nutrient Database for Dietary Studies (FNDDS) to evaluate whether a food is healthy for a specific user, supported by explanations of the key contributing nutrients. The benchmark incorporates three question complexity settings and evaluates reasoning across three downstream tasks. Extensive experiments with LLM backbones and baseline models demonstrate that the NGQA benchmark effectively challenges existing models. In sum, NGQA addresses a critical real-world problem while advancing GraphQA research with a novel domain-specific benchmark.

cs.CL↗

arXiv2024

Class-Aware Contrastive Optimization for Imbalanced Text Classification

The unique characteristics of text data make classification tasks a complex problem. Advances in unsupervised and semi-supervised learning and autoencoder architectures addressed several challenges. However, they still struggle with imbalanced text classification tasks, a common scenario in real-world applications, demonstrating a tendency to produce embeddings with unfavorable properties, such as class overlap. In this paper, we show that leveraging class-aware contrastive optimization combined with denoising autoencoders can successfully tackle imbalanced text classification tasks, achieving better performance than the current state-of-the-art. Concretely, our proposal combines reconstruction loss with contrastive class separation in the embedding space, allowing a better balance between the truthfulness of the generated embeddings and the model's ability to separate different classes. Compared with an extensive set of traditional and state-of-the-art competing methods, our proposal demonstrates a notable increase in performance across a wide variety of text datasets.

cs.CL↗

arXiv2024

Conformalized Selective Regression

Should prediction models always deliver a prediction? In the pursuit of maximum predictive performance, critical considerations of reliability and fairness are often overshadowed, particularly when it comes to the role of uncertainty. Selective regression, also known as the "reject option," allows models to abstain from predictions in cases of considerable uncertainty. Initially proposed seven decades ago, approaches to selective regression have mostly focused on distribution-based proxies for measuring uncertainty, particularly conditional variance. However, this focus neglects the significant influence of model-specific biases on a model's performance. In this paper, we propose a novel approach to selective regression by leveraging conformal prediction, which provides grounded confidence measures for individual predictions based on model-specific biases. In addition, we propose a standardized evaluation framework to allow proper comparison of selective regression approaches. Via an extensive experimental approach, we demonstrate how our proposed approach, conformalized selective regression, demonstrates an advantage over multiple state-of-the-art baselines.

cs.LG↗

arXiv2024

Experiential-Informed Data Reconstruction for Fishery Sustainability and Policies in the Azores

Fishery analysis is critical in maintaining the long-term sustainability of species and the livelihoods of millions of people who depend on fishing for food and income. The fishing gear, or metier, is a key factor significantly impacting marine habitats, selectively targeting species and fish sizes. Analysis of commercial catches or landings by metier in fishery stock assessment and management is crucial, providing robust estimates of fishing efforts and their impact on marine ecosystems. In this paper, we focus on a unique data set from the Azores' fishing data collection programs between 2010 and 2017, where little information on metiers is available and sparse throughout our timeline. Our main objective is to tackle the task of data set reconstruction, leveraging domain knowledge and machine learning methods to retrieve or associate metier-related information to each fish landing. We empirically validate the feasibility of this task using a diverse set of modeling approaches and demonstrate how it provides new insights into different fisheries' behavior and the impact of metiers over time, which are essential for future fish population assessments, management, and conservation efforts.

cs.LG↗

arXiv2024

Justice or Prejudice? Quantifying Biases in LLM-as-a-Judge

LLM-as-a-Judge has been widely utilized as an evaluation method in various benchmarks and served as supervised rewards in model training. However, despite their excellence in many domains, potential issues are under-explored, undermining their reliability and the scope of their utility. Therefore, we identify 12 key potential biases and propose a new automated bias quantification framework-CALM-which systematically quantifies and analyzes each type of bias in LLM-as-a-Judge by using automated and principle-guided modification. Our experiments cover multiple popular language models, and the results indicate that while advanced models have achieved commendable overall performance, significant biases persist in certain specific tasks. Empirical results suggest that there remains room for improvement in the reliability of LLM-as-a-Judge. Moreover, we also discuss the explicit and implicit influence of these biases and give some suggestions for the reliable application of LLM-as-a-Judge. Our work highlights the need for stakeholders to address these issues and remind users to exercise caution in LLM-as-a-Judge applications.

cs.CL↗

arXiv2024

Empowering Open Data Sharing for Social Good: A Privacy-Aware Approach

The Covid-19 pandemic has affected the world at multiple levels. Data sharing was pivotal for advancing research to understand the underlying causes and implement effective containment strategies. In response, many countries have promoted the availability of daily cases to support research initiatives, fostering collaboration between organisations and making such data available to the public through open data platforms. Despite the several advantages of data sharing, one of the major concerns before releasing health data is its impact on individuals' privacy. Such a sharing process should be based on state-of-the-art methods in Data Protection by Design and by Default. In this paper, we use a data set related to Covid-19 cases in the second largest hospital in Portugal to show how it is feasible to ensure data privacy while improving the quality and maintaining the utility of the data. Our goal is to demonstrate how knowledge exchange in multidisciplinary teams of healthcare practitioners, data privacy, and data science experts is crucial to co-developing strategies that ensure high utility of de-identified data.

cs.DB↗

arXiv2024

Automated Privacy-Preserving Techniques via Meta-Learning

Sharing private data for learning tasks is pivotal for transparent and secure machine learning applications. Many privacy-preserving techniques have been proposed for this task aiming to transform the data while ensuring the privacy of individuals. Some of these techniques have been incorporated into tools, whereas others are accessed through various online platforms. However, such tools require manual configuration, which can be complex and time-consuming. Moreover, they require substantial expertise, potentially restricting their use to those with advanced technical knowledge. In this paper, we propose AUTOPRIV, the first automated privacy-preservation method, that eliminates the need for any manual configuration. AUTOPRIV employs meta-learning to automate the de-identification process, facilitating the secure release of data for machine learning tasks. The main goal is to anticipate the predictive performance and privacy risk of a large set of privacy configurations. We provide a ranked list of the most promising solutions, which are likely to achieve an optimal approximation within a new domain. AUTOPRIV is highly effective as it reduces computational complexity and energy consumption considerably.

cs.LG↗

arXiv2024

Synthetic Data Outliers: Navigating Identity Disclosure

Multiple synthetic data generation models have emerged, among which deep learning models have become the vanguard due to their ability to capture the underlying characteristics of the original data. However, the resemblance of the synthetic to the original data raises important questions on the protection of individuals' privacy. As synthetic data is perceived as a means to fully protect personal information, most current related work disregards the impact of re-identification risk. In particular, limited attention has been given to exploring outliers, despite their privacy relevance. In this work, we analyze the privacy of synthetic data w.r.t the outliers. Our main findings suggest that outliers re-identification via linkage attack is feasible and easily achieved. Furthermore, additional safeguards such as differential privacy can prevent re-identification, albeit at the expense of the data utility.

cs.LG↗

arXiv2024

Relevance-aware Algorithmic Recourse

As machine learning continues to gain prominence, transparency and explainability are increasingly critical. Without an understanding of these models, they can replicate and worsen human bias, adversely affecting marginalized communities. Algorithmic recourse emerges as a tool for clarifying decisions made by predictive models, providing actionable insights to alter outcomes. They answer, 'What do I have to change?' to achieve the desired result. Despite their importance, current algorithmic recourse methods treat all domain values equally, which is unrealistic in real-world settings. In this paper, we propose a novel framework, Relevance-Aware Algorithmic Recourse (RAAR), that leverages the concept of relevance in applying algorithmic recourse to regression tasks. We conducted multiple experiments on 15 datasets to outline how relevance influences recourses. Results show that relevance contributes algorithmic recourses comparable to well-known baselines, with greater efficiency and lower relative costs.

cs.LG↗

arXiv2024

AnyLoss: Transforming Classification Metrics into Loss Functions

Many evaluation metrics can be used to assess the performance of models in binary classification tasks. However, most of them are derived from a confusion matrix in a non-differentiable form, making it very difficult to generate a differentiable loss function that could directly optimize them. The lack of solutions to bridge this challenge not only hinders our ability to solve difficult tasks, such as imbalanced learning, but also requires the deployment of computationally expensive hyperparameter search processes in model selection. In this paper, we propose a general-purpose approach that transforms any confusion matrix-based metric into a loss function, \textit{AnyLoss}, that is available in optimization processes. To this end, we use an approximation function to make a confusion matrix represented in a differentiable form, and this approach enables any confusion matrix-based metric to be directly used as a loss function. The mechanism of the approximation function is provided to ensure its operability and the differentiability of our loss functions is proved by suggesting their derivatives. We conduct extensive experiments under diverse neural networks with many datasets, and we demonstrate their general availability to target any confusion matrix-based metrics. Our method, especially, shows outstanding achievements in dealing with imbalanced datasets, and its competitive learning speed, compared to multiple baseline models, underscores its efficiency.

cs.LG↗

arXiv2024

Time Series Data Augmentation as an Imbalanced Learning Problem

Recent state-of-the-art forecasting methods are trained on collections of time series. These methods, often referred to as global models, can capture common patterns in different time series to improve their generalization performance. However, they require large amounts of data that might not be readily available. Besides this, global models sometimes fail to capture relevant patterns unique to a particular time series. In these cases, data augmentation can be useful to increase the sample size of time series datasets. The main contribution of this work is a novel method for generating univariate time series synthetic samples. Our approach stems from the insight that the observations concerning a particular time series of interest represent only a small fraction of all observations. In this context, we frame the problem of training a forecasting model as an imbalanced learning task. Oversampling strategies are popular approaches used to deal with the imbalance problem in machine learning. We use these techniques to create synthetic time series observations and improve the accuracy of forecasting models. We carried out experiments using 7 different databases that contain a total of 5502 univariate time series. We found that the proposed solution outperforms both a global and a local model, thus providing a better trade-off between these two approaches.

cs.LG↗

arXiv2024

Differentially-Private Data Synthetisation for Efficient Re-Identification Risk Control

Protecting user data privacy can be achieved via many methods, from statistical transformations to generative models. However, all of them have critical drawbacks. For example, creating a transformed data set using traditional techniques is highly time-consuming. Also, recent deep learning-based solutions require significant computational resources in addition to long training phases, and differentially private-based solutions may undermine data utility. In this paper, we propose $ε$-PrivateSMOTE, a technique designed for safeguarding against re-identification and linkage attacks, particularly addressing cases with a high \sloppy re-identification risk. Our proposal combines synthetic data generation via noise-induced interpolation with differential privacy principles to obfuscate high-risk cases. We demonstrate how $ε$-PrivateSMOTE is capable of achieving competitive results in privacy risk and better predictive performance when compared to multiple traditional and state-of-the-art privacy-preservation methods, including generative adversarial networks, variational autoencoders, and differential privacy baselines. We also show how our method improves time requirements by at least a factor of 9 and is a resource-efficient solution that ensures high performance without specialised hardware.

cs.LG↗

arXiv2023

Dynamics of Fisheries in the Azores Islands: A Network Analysis Approach

In the context of the global seafood industry, the Azores archipelago (Portugal) plays a pivotal role due to its vast maritime domain. This study employs complex network analysis techniques to investigate the dynamics of Azores fisheries, using time series data converted into networks. We uncover associations between Tunas and specific islands, consistent links among fish classifications, and identify other pivotal nodes within the fishing network. Remarkably, nodes with high degrees and a local clustering coefficient of one provide crucial insights into the fishing ecosystem. This study highlights the value of network analysis for understanding fisheries complexities and offers insights into sustainable management and the preservation of marine ecosystems. It also emphasizes the urgency for ongoing research and data collection to enrich our understanding of this multifaceted domain.

cs.SI↗

arXiv2023

A Three-Way Knot: Privacy, Fairness, and Predictive Performance Dynamics

As the frontier of machine learning applications moves further into human interaction, multiple concerns arise regarding automated decision-making. Two of the most critical issues are fairness and data privacy. On the one hand, one must guarantee that automated decisions are not biased against certain groups, especially those unprotected or marginalized. On the other hand, one must ensure that the use of personal information fully abides by privacy regulations and that user identities are kept safe. The balance between privacy, fairness, and predictive performance is complex. However, despite their potential societal impact, we still demonstrate a poor understanding of the dynamics between these optimization vectors. In this paper, we study this three-way tension and how the optimization of each vector impacts others, aiming to inform the future development of safe applications. In light of claims that predictive performance and fairness can be jointly optimized, we find this is only possible at the expense of data privacy. Overall, experimental results show that one of the vectors will be penalized regardless of which of the three we optimize. Nonetheless, we find promising avenues for future work in joint optimization solutions, where smaller trade-offs are observed between the three vectors.

cs.LG↗

arXiv2023

Class-Imbalanced Learning on Graphs: A Survey

The rapid advancement in data-driven research has increased the demand for effective graph data analysis. However, real-world data often exhibits class imbalance, leading to poor performance of machine learning models. To overcome this challenge, class-imbalanced learning on graphs (CILG) has emerged as a promising solution that combines the strengths of graph representation learning and class-imbalanced learning. In recent years, significant progress has been made in CILG. Anticipating that such a trend will continue, this survey aims to offer a comprehensive understanding of the current state-of-the-art in CILG and provide insights for future research directions. Concerning the former, we introduce the first taxonomy of existing work and its connection to existing imbalanced learning literature. Concerning the latter, we critically analyze recent work in CILG and discuss urgent lines of inquiry within the topic. Moreover, we provide a continuously maintained reading list of papers and code at https://github.com/yihongma/CILG-Papers.

cs.LG↗

arXiv2022

Robustness Evaluation of Regression Tasks with Skewed Domain Preferences

In natural phenomena, data distributions often deviate from normality. One can think of cataclysms as a self-explanatory example: events that occur almost never, and at the same time are many standard deviations away from the common outcome. In many scientific contexts it is exactly these tail events that researchers are most interested in anticipating, so that adequate measures can be taken to prevent or attenuate a major impact on society. Despite such efforts, we have yet to provide definite answers to crucial issues in evaluating predictive solutions in domains such as weather, pollution, health. In this paper, we deal with two encapsulated problems simultaneously. First, assessing the performance of regression models when non-uniform preferences apply - not all values are equally relevant concerning the accuracy of their prediction, and there's a particular interest in the most extreme values. Second, assessing the robustness of models when dealing with uncertainty regarding the actual underlying distribution of values relevant for such problems. We show how different levels of relevance associated with target values may impact experimental conclusions, and demonstrate the practical utility of the proposed methods.

cs.LG↗

arXiv2022

Model Optimization in Imbalanced Regression

Imbalanced domain learning aims to produce accurate models in predicting instances that, though underrepresented, are of utmost importance for the domain. Research in this field has been mainly focused on classification tasks. Comparatively, the number of studies carried out in the context of regression tasks is negligible. One of the main reasons for this is the lack of loss functions capable of focusing on minimizing the errors of extreme (rare) values. Recently, an evaluation metric was introduced: Squared Error Relevance Area (SERA). This metric posits a bigger emphasis on the errors committed at extreme values while also accounting for the performance in the overall target variable domain, thus preventing severe bias. However, its effectiveness as an optimization metric is unknown. In this paper, our goal is to study the impacts of using SERA as an optimization criterion in imbalanced regression tasks. Using gradient boosting algorithms as proof of concept, we perform an experimental study with 36 data sets of different domains and sizes. Results show that models that used SERA as an objective function are practically better than the models produced by their respective standard boosting algorithms at the prediction of extreme values. This confirms that SERA can be embedded as a loss function into optimization-based learning algorithms for imbalanced regression scenarios.

cs.LG↗

arXiv2022

Survey on Privacy-Preserving Techniques for Data Publishing

The exponential growth of collected, processed, and shared microdata has given rise to concerns about individuals' privacy. As a result, laws and regulations have emerged to control what organisations do with microdata and how they protect it. Statistical Disclosure Control seeks to reduce the risk of confidential information disclosure by de-identifying them. Such de-identification is guaranteed through privacy-preserving techniques. However, de-identified data usually results in loss of information, with a possible impact on data analysis precision and model predictive performance. The main goal is to protect the individuals' privacy while maintaining the interpretability of the data, i.e. its usefulness. Statistical Disclosure Control is an area that is expanding and needs to be explored since there is still no solution that guarantees optimal privacy and utility. This survey focuses on all steps of the de-identification process. We present existing privacy-preserving techniques used in microdata de-identification, privacy measures suitable for several disclosure types and, information loss and predictive performance measures. In this survey, we discuss the main challenges raised by privacy constraints, describe the main approaches to handle these obstacles, review taxonomies of privacy-preserving techniques, provide a theoretical analysis of existing comparative studies, and raise multiple open issues.

cs.CR↗