arXiv subjects

Oliver Eberle

Publications and source records attributed to Oliver Eberle.

At least 19 recordsLinked to original sources

arXiv2026

Distributed Sparse Interventions in Language Models

Language models perform a wide range of tasks at varying levels of abstraction with the capacity to flexibly infer tasks from context, execute multiple tasks simultaneously, and select among competing tasks. To study the role of model components in task behaviour, their causal influence can be investigated through interventions. Prior work on model steering has largely focused on interventions along global directions in activation space, modeling task representations as approximately linear and additive. By studying interventions at the neuron level, we find substantial, neuron-specific nonlinear effects on model outputs that are not captured by current steering approaches. We introduce Distributed Sparse Interventions (DSI), an intervention approach that considers nonlinearities and interactions between neurons across layers to identify sparse sets of neurons that elicit task-relevant computations. Across a range of tasks, we demonstrate that DSI can activate task behaviour in instruction-tuned language models by localising and intervening on as few as 0.01% of neurons, highlighting the effectiveness of sparse, distributed interventions in the neuron basis. Additionally, adopting a set-based perspective enables computations over the identified neuron sets, offering insights into the roles of individual neurons by analysing their effects across tasks. Through sparse interventions, DSI enables fine-grained control over model behaviour, localisation of task-relevant neuron sets, and furthers our understanding of task composition.

cs.LG↗

arXiv2026

Beyond Attention Heatmaps: How to Get Better Explanations for Multiple Instance Learning Models in Histopathology

Multiple instance learning (MIL) has enabled substantial progress in computational histopathology, where a large amount of patches from gigapixel whole slide images are aggregated into slide-level predictions. Heatmaps are widely used to validate MIL models and to discover tissue biomarkers. Yet, the validity of these heatmaps has barely been investigated. In this work, we introduce a general framework for evaluating the quality of MIL heatmaps without requiring additional labels. We conduct a large-scale benchmark experiment to assess six explanation methods across histopathology task types (classification, regression, survival), MIL model architectures (Attention-, Transformer-, Mamba-based), and patch encoder backbones (UNI2, Virchow2). Our results show that explanation quality mostly depends on MIL model architecture and task type, with perturbation ("Single"), layer-wise relevance propagation (LRP), and integrated gradients (IG) consistently outperforming attention-based and gradient-based saliency heatmaps, which often fail to reflect model decision mechanisms. We further demonstrate the advanced capabilities of the best-performing explanation methods: (i) We provide a proof-of-concept that MIL heatmaps of a bulk gene expression prediction model can be correlated with spatial transcriptomics for biological validation, and (ii) showcase the discovery of distinct model strategies for predicting human papillomavirus (HPV) infection from head and neck cancer slides. Our work highlights the importance of validating MIL heatmaps and establishes that improved explainability can enable more reliable model validation and yield biological insights, making a case for a broader adoption of explainable AI in digital pathology. Our code is provided in a public GitHub repository: https://github.com/bifold-pathomics/xMIL/tree/xmil-journal

cs.CV↗

arXiv2025

AlgoTrace: Algorithmic Primitives and Compositional Geometry of Reasoning in Language Models

How do inference time and latent computations enable large language models (LLMs) to solve multi-step reasoning problems? We introduce AlgoTrace, a framework for tracing and steering algorithmic operations in the model latent space for multi-step reasoning. We operationalize primitives by clustering latent activations of the model when solving four benchmarks: Traveling Salesperson Problem (TSP), 3SAT, AIME, and Graph Navigation. We annotate the clusters using their corresponding tokens in the reasoning trace. We then apply function vector methods to extract primitive vectors as reusable compositional building blocks of reasoning. We find that a) injecting a primitive vector into models (Phi, Qwen, Llama) elicits the associated algorithmic operation in the reasoning trace, b) injecting primitives can steer behavior across tasks, c) primitive vectors can be composed through algebraic operations, revealing a geometric logic in activation space, and d) a fine-tuned model exhibits improved composition of primitives (Phi-4-Reasoning vs. Phi-4). These findings demonstrate that LLM reasoning can be understood as a walk through algorithmic primitives in the latent space governed by compositional geometry. These primitives transfer across tasks, and reasoning finetuning strengthens algorithmic generalization and composition across domains.

cs.LG↗

arXiv2025

RelP: Faithful and Efficient Circuit Discovery in Language Models via Relevance Patching

Activation patching is a standard method in mechanistic interpretability for localizing the components of a model responsible for specific behaviors, but it is computationally expensive to apply at scale. Attribution patching offers a faster, gradient-based approximation, yet suffers from noise and reduced reliability in deep, highly non-linear networks. In this work, we introduce Relevance Patching (RelP), which replaces the local gradients in attribution patching with propagation coefficients derived from Layer-wise Relevance Propagation (LRP). LRP propagates the network's output backward through the layers, redistributing relevance to lower-level components according to local propagation rules that ensure properties such as relevance conservation or improved signal-to-noise ratio. Like attribution patching, RelP requires only two forward passes and one backward pass, maintaining computational efficiency while improving faithfulness. We validate RelP across a range of models and tasks, showing that it more accurately approximates activation patching than standard attribution patching, particularly when analyzing residual stream and MLP outputs in the Indirect Object Identification (IOI) task. For instance, for MLP outputs in GPT-2 Large, attribution patching achieves a Pearson correlation of 0.006, whereas RelP reaches 0.956, highlighting the improvement offered by RelP. Additionally, we compare the faithfulness of sparse feature circuits identified by RelP and Integrated Gradients (IG), showing that RelP achieves comparable faithfulness without the extra computational cost associated with IG.

cs.LG↗

arXiv2025

Position: We Need An Algorithmic Understanding of Generative AI

What algorithms do LLMs actually learn and use to solve problems? Studies addressing this question are sparse, as research priorities are focused on improving performance through scale, leaving a theoretical and empirical gap in understanding emergent algorithms. This position paper proposes AlgEval: a framework for systematic research into the algorithms that LLMs learn and use. AlgEval aims to uncover algorithmic primitives, reflected in latent representations, attention, and inference-time compute, and their algorithmic composition to solve task-specific problems. We highlight potential methodological paths and a case study toward this goal, focusing on emergent search algorithms. Our case study illustrates both the formation of top-down hypotheses about candidate algorithms, and bottom-up tests of these hypotheses via circuit-level analysis of attention patterns and hidden states. The rigorous, systematic evaluation of how LLMs actually solve tasks provides an alternative to resource-intensive scaling, reorienting the field toward a principled understanding of underlying computations. Such algorithmic explanations offer a pathway to human-understandable interpretability, enabling comprehension of the model's internal reasoning performance measures. This can in turn lead to more sample-efficient methods for training and improving performance, as well as novel architectures for end-to-end and multi-agent systems.

cs.AI↗

arXiv2025

Capturing Polysemanticity with PRISM: A Multi-Concept Feature Description Framework

Automated interpretability research aims to identify concepts encoded in neural network features to enhance human understanding of model behavior. Within the context of large language models (LLMs) for natural language processing (NLP), current automated neuron-level feature description methods face two key challenges: limited robustness and the assumption that each neuron encodes a single concept (monosemanticity), despite increasing evidence of polysemanticity. This assumption restricts the expressiveness of feature descriptions and limits their ability to capture the full range of behaviors encoded in model internals. To address this, we introduce Polysemantic FeatuRe Identification and Scoring Method (PRISM), a novel framework specifically designed to capture the complexity of features in LLMs. Unlike approaches that assign a single description per neuron, common in many automated interpretability methods in NLP, PRISM produces more nuanced descriptions that account for both monosemantic and polysemantic behavior. We apply PRISM to LLMs and, through extensive benchmarking against existing methods, demonstrate that our approach produces more accurate and faithful feature descriptions, improving both overall description quality (via a description score) and the ability to capture distinct concepts when polysemanticity is present (via a polysemanticity score).

cs.LG↗

arXiv2025

Trick or Neat: Adversarial Ambiguity and Language Model Evaluation

Detecting ambiguity is important for language understanding, including uncertainty estimation, humour detection, and processing garden path sentences. We assess language models' sensitivity to ambiguity by introducing an adversarial ambiguity dataset that includes syntactic, lexical, and phonological ambiguities along with adversarial variations (e.g., word-order changes, synonym replacements, and random-based alterations). Our findings show that direct prompting fails to robustly identify ambiguity, while linear probes trained on model representations can decode ambiguity with high accuracy, sometimes exceeding 90\%. Our results offer insights into the prompting paradigm and how language models encode ambiguity at different layers. We release both our code and data: https://github.com/coastalcph/lm_ambiguity.

cs.CL↗

arXiv2025

Cat, Rat, Meow: On the Alignment of Language Model and Human Term-Similarity Judgments

Small and mid-sized generative language models have gained increasing attention. Their size and availability make them amenable to being analyzed at a behavioral as well as a representational level, allowing investigations of how these levels interact. We evaluate 32 publicly available language models for their representational and behavioral alignment with human similarity judgments on a word triplet task. This provides a novel evaluation setting to probe semantic associations in language beyond common pairwise comparisons. We find that (1) even the representations of small language models can achieve human-level alignment, (2) instruction-tuned model variants can exhibit substantially increased agreement, (3) the pattern of alignment across layers is highly model dependent, and (4) alignment based on models' behavioral responses is highly dependent on model size, matching their representational alignment only for the largest evaluated models.

cs.LG↗

arXiv2024

A Systematic Comparison between Extractive Self-Explanations and Human Rationales in Text Classification

Instruction-tuned LLMs are able to provide \textit{an} explanation about their output to users by generating self-explanations, without requiring the application of complex interpretability techniques. In this paper, we analyse whether this ability results in a \textit{good} explanation. We evaluate self-explanations in the form of input rationales with respect to their plausibility to humans. We study three text classification tasks: sentiment classification, forced labour detection and claim verification. We include Danish and Italian translations of the sentiment classification task and compare self-explanations to human annotations. For this, we collected human rationale annotations for Climate-Fever, a claim verification dataset. We furthermore evaluate the faithfulness of human and self-explanation rationales with respect to correct model predictions, and extend the study by incorporating post-hoc attribution-based explanations. We analyse four open-weight LLMs and find that alignment between self-explanations and human rationales highly depends on text length and task complexity. Nevertheless, self-explanations yield faithful subsets of token-level rationales, whereas post-hoc attribution methods tend to emphasize structural and formatting tokens, reflecting fundamentally different explanation strategies.

cs.CL↗

arXiv2024

MambaLRP: Explaining Selective State Space Sequence Models

Recent sequence modeling approaches using selective state space sequence models, referred to as Mamba models, have seen a surge of interest. These models allow efficient processing of long sequences in linear time and are rapidly being adopted in a wide range of applications such as language modeling, demonstrating promising performance. To foster their reliable use in real-world scenarios, it is crucial to augment their transparency. Our work bridges this critical gap by bringing explainability, particularly Layer-wise Relevance Propagation (LRP), to the Mamba architecture. Guided by the axiom of relevance conservation, we identify specific components in the Mamba architecture, which cause unfaithful explanations. To remedy this issue, we propose MambaLRP, a novel algorithm within the LRP framework, which ensures a more stable and reliable relevance propagation through these components. Our proposed method is theoretically sound and excels in achieving state-of-the-art explanation performance across a diverse range of models and datasets. Moreover, MambaLRP facilitates a deeper inspection of Mamba architectures, uncovering various biases and evaluating their significance. It also enables the analysis of previous speculations regarding the long-range capabilities of Mamba models.

cs.LG↗

arXiv2024

xMIL: Insightful Explanations for Multiple Instance Learning in Histopathology

Multiple instance learning (MIL) is an effective and widely used approach for weakly supervised machine learning. In histopathology, MIL models have achieved remarkable success in tasks like tumor detection, biomarker prediction, and outcome prognostication. However, MIL explanation methods are still lagging behind, as they are limited to small bag sizes or disregard instance interactions. We revisit MIL through the lens of explainable AI (XAI) and introduce xMIL, a refined framework with more general assumptions. We demonstrate how to obtain improved MIL explanations using layer-wise relevance propagation (LRP) and conduct extensive evaluation experiments on three toy settings and four real-world histopathology datasets. Our approach consistently outperforms previous explanation attempts with particularly improved faithfulness scores on challenging biomarker prediction tasks. Finally, we showcase how xMIL explanations enable pathologists to extract insights from MIL models, representing a significant advance for knowledge discovery and model debugging in digital histopathology. Codes are available at: https://github.com/bifold-pathomics/xMIL.

cs.LG↗

arXiv2024

Explaining Text Similarity in Transformer Models

As Transformers have become state-of-the-art models for natural language processing (NLP) tasks, the need to understand and explain their predictions is increasingly apparent. Especially in unsupervised applications, such as information retrieval tasks, similarity models built on top of foundation model representations have been widely applied. However, their inner prediction mechanisms have mostly remained opaque. Recent advances in explainable AI have made it possible to mitigate these limitations by leveraging improved explanations for Transformers through layer-wise relevance propagation (LRP). Using BiLRP, an extension developed for computing second-order explanations in bilinear similarity models, we investigate which feature interactions drive similarity in NLP models. We validate the resulting explanations and demonstrate their utility in three corpus-level use cases, analyzing grammatical interactions, multilingual semantics, and biomedical text retrieval. Our findings contribute to a deeper understanding of different semantic similarity tasks and models, highlighting how novel explainable AI methods enable in-depth analyses and corpus-level insights.

cs.CL↗

arXiv2024

Evaluating Webcam-based Gaze Data as an Alternative for Human Rationale Annotations

Rationales in the form of manually annotated input spans usually serve as ground truth when evaluating explainability methods in NLP. They are, however, time-consuming and often biased by the annotation process. In this paper, we debate whether human gaze, in the form of webcam-based eye-tracking recordings, poses a valid alternative when evaluating importance scores. We evaluate the additional information provided by gaze data, such as total reading times, gaze entropy, and decoding accuracy with respect to human rationale annotations. We compare WebQAmGaze, a multilingual dataset for information-seeking QA, with attention and explainability-based importance scores for 4 different multilingual Transformer-based language models (mBERT, distil-mBERT, XLMR, and XLMR-L) and 3 languages (English, Spanish, and German). Our pipeline can easily be applied to other tasks and languages. Our findings suggest that gaze data offers valuable linguistic insights that could be leveraged to infer task difficulty and further show a comparable ranking of explainability methods to that of human rationales.

cs.CL↗

arXiv2023

Rather a Nurse than a Physician -- Contrastive Explanations under Investigation

Contrastive explanations, where one decision is explained in contrast to another, are supposed to be closer to how humans explain a decision than non-contrastive explanations, where the decision is not necessarily referenced to an alternative. This claim has never been empirically validated. We analyze four English text-classification datasets (SST2, DynaSent, BIOS and DBpedia-Animals). We fine-tune and extract explanations from three different models (RoBERTa, GTP-2, and T5), each in three different sizes and apply three post-hoc explainability methods (LRP, GradientxInput, GradNorm). We furthermore collect and release human rationale annotations for a subset of 100 samples from the BIOS dataset for contrastive and non-contrastive settings. A cross-comparison between model-based rationales and human annotations, both in contrastive and non-contrastive settings, yields a high agreement between the two settings for models as well as for humans. Moreover, model-based explanations computed in both settings align equally well with human rationales. Thus, we empirically find that humans do not necessarily explain in a contrastive manner.9 pages, long paper at ACL 2022 proceedings.

cs.CL↗

arXiv2023

Insightful analysis of historical sources at scales beyond human capabilities using unsupervised Machine Learning and XAI

Historical materials are abundant. Yet, piecing together how human knowledge has evolved and spread both diachronically and synchronically remains a challenge that can so far only be very selectively addressed. The vast volume of materials precludes comprehensive studies, given the restricted number of human specialists. However, as large amounts of historical materials are now available in digital form there is a promising opportunity for AI-assisted historical analysis. In this work, we take a pivotal step towards analyzing vast historical corpora by employing innovative machine learning (ML) techniques, enabling in-depth historical insights on a grand scale. Our study centers on the evolution of knowledge within the `Sacrobosco Collection' -- a digitized collection of 359 early modern printed editions of textbooks on astronomy used at European universities between 1472 and 1650 -- roughly 76,000 pages, many of which contain astronomic, computational tables. An ML based analysis of these tables helps to unveil important facets of the spatio-temporal evolution of knowledge and innovation in the field of mathematical astronomy in the period, as taught at European universities.

cs.LG↗

arXiv2022

XAI for Transformers: Better Explanations through Conservative Propagation

Transformers have become an important workhorse of machine learning, with numerous applications. This necessitates the development of reliable methods for increasing their transparency. Multiple interpretability methods, often based on gradient information, have been proposed. We show that the gradient in a Transformer reflects the function only locally, and thus fails to reliably identify the contribution of input features to the prediction. We identify Attention Heads and LayerNorm as main reasons for such unreliable explanations and propose a more stable way for propagation through these layers. Our proposal, which can be seen as a proper extension of the well-established LRP method to Transformers, is shown both theoretically and empirically to overcome the deficiency of a simple gradient-based approach, and achieves state-of-the-art explanation performance on a broad range of Transformer models and datasets.

cs.LG↗

arXiv2022

Do Transformer Models Show Similar Attention Patterns to Task-Specific Human Gaze?

Learned self-attention functions in state-of-the-art NLP models often correlate with human attention. We investigate whether self-attention in large-scale pre-trained language models is as predictive of human eye fixation patterns during task-reading as classical cognitive models of human attention. We compare attention functions across two task-specific reading datasets for sentiment analysis and relation extraction. We find the predictiveness of large-scale pre-trained self-attention for human attention depends on `what is in the tail', e.g., the syntactic nature of rare contexts. Further, we observe that task-specific fine-tuning does not increase the correlation with human task-specific reading. Through an input reduction experiment we give complementary insights on the sparsity and fidelity trade-off, showing that lower-entropy attention vectors are more faithful.

cs.CL↗

arXiv2020

Higher-Order Explanations of Graph Neural Networks via Relevant Walks

Graph Neural Networks (GNNs) are a popular approach for predicting graph structured data. As GNNs tightly entangle the input graph into the neural network structure, common explainable AI approaches are not applicable. To a large extent, GNNs have remained black-boxes for the user so far. In this paper, we show that GNNs can in fact be naturally explained using higher-order expansions, i.e. by identifying groups of edges that jointly contribute to the prediction. Practically, we find that such explanations can be extracted using a nested attribution scheme, where existing techniques such as layer-wise relevance propagation (LRP) can be applied at each step. The output is a collection of walks into the input graph that are relevant for the prediction. Our novel explanation method, which we denote by GNN-LRP, is applicable to a broad range of graph neural networks and lets us extract practically relevant insights on sentiment analysis of text data, structure-property relationships in quantum chemistry, and image classification.

cs.LG↗