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Oliver Tan

Publications and source records attributed to Oliver Tan.

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MolCryst-MLIPs: A Machine-Learned Interatomic Potentials Database for Molecular Crystals

We present an open Molecular Crystal (MC) database of Machine-Learned Interatomic Potentials (MLIP) called MolCryst-MLIPs. The first release comprises fine-tuned MACE models for nine molecular crystal systems---Benzamide, Benzoic acid, Coumarin, Durene, Isonicotinamide, Nicotinic acid , Niacinamide, Pyrazinamide, and Resorcinol---developed using the Automated Machine Learning Pipeline (AMLP), which streamlines the entire MLIP development workflow, from reference data generation to model training and validation, into a reproducible and user-friendly pipeline. Models are fine-tuned from the MACE-MH-1 foundation model omol head), yielding a mean energy MAE of 0.141 kJ/mol/atom and a mean force MAE of 0.648 kJ/mol/Angstrom across all systems. Benchmarked against three state-of-the-art foundation models on the DFT-labelled polymorph set, only the fine-tuned models resolve the polymorphic energy landscape. Dynamical stability and structural integrity, as assessed through energy conservation, P2 orientational order parameters, and radial distribution functions, are evaluated using molecular dynamics simulations. The released models and datasets constitute a growing open database of validated MLIPs, ready for production MD simulations of molecular crystal polymorphism across the polymorphic landscape of each target compound under different thermodynamic conditions.

cs.LG

Conjecture on Supersequence Lower Bound related to Connell Sequence

This paper proves the minimum size of a supersequence over a set of eight elements is 52. This disproves a conjecture that the lower bound of the supersequence is the partial sum of the geometric Connell sequence. By studying the internal distribution of individual elements within sub-strings of the supersequence called segments, the proof provides important results on the internal structure that could help to understand the general lower bound problem for finite sets.

math.CO

Skip Letters for Short Supersequence of All Permutations

A supersequence over a finite set is a sequence that contains as subsequence all permutations of the set. This paper defines an infinite array of methods to create supersequences of decreasing lengths. This yields the shortest known supersequences over larger sets. It also provides the best results asymptotically. It is based on a general proof using a new property called strong completeness. The same technique also can be used to prove existing supersequences which combines the old and new ones into an unified conceptual framework.

math.CO