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Omar S. Marzouk

Publications and source records attributed to Omar S. Marzouk.

2 recordsLinked to original sources

Method and System for Image Analysis to Detect Cancer

Breast cancer is the most common cancer and is the leading cause of cancer death among women worldwide. Detection of breast cancer, while it is still small and confined to the breast, provides the best chance of effective treatment. Computer Aided Detection (CAD) systems that detect cancer from mammograms will help in reducing the human errors that lead to missing breast carcinoma. Literature is rich of scientific papers for methods of CAD design, yet with no complete system architecture to deploy those methods. On the other hand, commercial CADs are developed and deployed only to vendors' mammography machines with no availability to public access. This paper presents a complete CAD; it is complete since it combines, on a hand, the rigor of algorithm design and assessment (method), and, on the other hand, the implementation and deployment of a system architecture for public accessibility (system). (1) We develop a novel algorithm for image enhancement so that mammograms acquired from any digital mammography machine look qualitatively of the same clarity to radiologists' inspection; and is quantitatively standardized for the detection algorithms. (2) We develop novel algorithms for masses and microcalcifications detection with accuracy superior to both literature results and the majority of approved commercial systems. (3) We design, implement, and deploy a system architecture that is computationally effective to allow for deploying these algorithms to cloud for public access.

eess.IV↗

DVP: Data Visualization Platform

We identify two major steps in data analysis, data exploration for understanding and observing patterns/relationships in data; and construction, design and assessment of various models to formalize these relationships. For each step, there exists a large set of tools and software. For the first step, many visualization tools exist, such as, GGobi, Parallax, and Crystal Vision, and most recently tableau and plottly. For the second step, many Scientific Computing Environments (SCEs) exist, such as, Matlab, Mathematica, R and Python. However, there does not exist a tool which allows for seamless two-way interaction between visualization tools and SCEs. We have designed and implemented a data visualization platform (DVP) with an architecture and design that attempts to bridge this gap. DVP connects seamlessly to SCEs to bring the computational capabilities to the visualization methods in a single coherent platform. DVP is designed with two interfaces, the desktop stand alone version and the online interface. To illustrate the power of DVP design, a free demo for the online interface of DVP is available \citep{DVP} and very low-level design details are explained in this article. Since DVP was launched, circa 2012, the present manuscript was not published since today for commercialization and patent considerations.

cs.GR↗