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Omer Granek

Publications and source records attributed to Omer Granek.

8 recordsLinked to original sources

Natural Selection in the Wake of Catastrophe

Living organisms, from bacteria to humans, are more likely to survive if their traits enhance fitness. In populations well adapted to their environmental niches, natural selection proceeds via rarely beneficial mutations. But when a catastrophe wipes out niche diversity, sudden adaptation often follows. Here, we present a data-validated theory of natural selection in the wake of catastrophe and unveil a simple law that emerges during recovery: the mean fitness relaxes inversely with time, with a prefactor proportional to the number of traits coupled to the post-catastrophe environment. We put our approach to test using experimental fitness landscapes measured following antibiotic administration to E. coli. The resulting mean trait adaptation is not described by gradient ascent on a fitness landscape, instead it follows an algorithm known as Levenberg-Marquardt optimization. Near fitness peaks, evolutionary trajectories are biased against greediness - from an optimization perspective, post-catastrophic selection is optimistic.

q-bio.PE

How Continuous Symmetry Stabilizes the Ordered Phase of Polar Flocks

We study the stability of the ordered phase of compressible polar flocks against the nucleation of counter-propagating droplets, using a combination of analytical theory, microscopic and hydrodynamic simulations. For discrete-symmetry flocks, such droplets are known to always grow and propagate, making the ordered phase metastable. We explain how, on the contrary, continuous symmetry can stabilize the ordered phase at small enough noise by destabilizing the leading edge of growing droplets. Flocking models with continuous symmetries thus have a lower critical dimension than their discrete-symmetry counterparts, in contrast to equilibrium physics.

cond-mat.soft

Lever rule violation and pressure imbalance in a driven granular system

We study a monolayer of metal balls under periodic chiral driving in the horizontal plane. Energy dissipation occurs in this system via (i) inelastic collisions and (ii) frictional interaction with the substrate. We show that below a density-dependent critical drive, the system phase separates into a fluid phase coexisting with a solid phase. Unlike ordinary coexistence, however, the system does not obey the lever rule, as the fluid-phase density depends on the overall particle density. Additionally, the pressure is discontinuous across the fluid-solid interface, accompanied by a chiral edge current at the interface.

cond-mat.soft

Inclusions, Boundaries and Disorder in Scalar Active Matter

Active systems are driven out of equilibrium by exchanging energy and momentum with their environment. This endows them with anomalous mechanical properties that we review in this colloquium for the case of dry scalar active matter, which has attracted considerable attention. These unusual properties lead to a rich physics when active fluids are in contact with boundaries, inclusions, tracers, or disordered potentials. Indeed, studies of the mechanical pressure of active fluids and of the dynamics of passive tracers have shown that active systems impact their environment in non-trivial ways, for example, by propelling and rotating anisotropic inclusions. Conversely, the long-ranged density and current modulations induced by localized obstacles show how the environment can have a far-reaching impact on active fluids. This is best exemplified by the propensity of bulk and boundary disorder to destroy bulk phase separation in active matter, showing active systems to be much more sensitive to their surroundings than passive ones. This colloquium aims at providing a unifying perspective on the rich interplay between active systems and their environments.

cond-mat.soft

Universal Correlations in Local Measurements Directly Probe Effective Diffusivity

Measuring transport coefficients at the microscale remains challenging, often relying on indirect methods that require modeling and calibration. This article derives universal asymptotic forms for the autocorrelation and relative uncertainty of local probe measurements in dilute diffusive systems. Valid both at and far from equilibrium, these forms directly connect microscopic measurements to the effective diffusivity. Indirect methods such as dynamic light scattering and fluorescence correlation spectroscopy can therefore serve as asymptotically direct probes applicable to active and other microscopically nondiffusive systems. Simulations across several models and observables confirm the broad applicability of these predictions to a variety of probes.

cond-mat.stat-mech

Metastability of Discrete-Symmetry Flocks

We study the stability of the ordered phase of flocking models with a scalar order parameter. Using both the active Ising model and a hydrodynamic description, we show that droplets of particles moving in the direction opposite to that of the ordered phase nucleate and grow. We characterize analytically this self-similar growth and demonstrate that droplets spread ballistically in all directions. Our results imply that, in the thermodynamic limit, discrete-symmetry flocks -- and, by extension, continuous-symmetry flocks with rotational anisotropy -- are metastable in all dimensions.

cond-mat.soft

The Anomalous Transport of Tracers in Active Baths

We derive the long-time dynamics of a tracer immersed in a one-dimensional active bath. In contrast to previous studies, we find that the damping and noise correlations possess long-time tails with exponents that depend on the tracer symmetry. For generic tracers, shape asymmetry induces ratchet effects that alter fluctuations and lead to superdiffusion and friction that grows with time when the tracer is dragged at a constant speed. In the singular limit of a completely symmetric tracer, we recover normal diffusion and finite friction. Furthermore, for small symmetric tracers, the active contribution to the friction becomes negative: active particles enhance motion rather than oppose it. These results show that, in low-dimensional systems, the motion of a passive tracer in an active bath cannot be modeled as a persistent random walker with a finite correlation time.

cond-mat.soft

Bodies in an Interacting Active Fluid: Far-Field Influence of a Single Body and Interaction Between Two Bodies

Because active particles break time-reversal symmetry, an active fluid can sustain currents even without an external drive. We show that when a passive body is placed in a fluid of pairwise interacting active particles, it generates long-range currents, corresponding to density and pressure gradients. By using a multipole expansion and a far-field constitutive relation, we show that the leading-order behavior of all three corresponds to a source dipole. Then, when two bodies or more are placed in the active fluid, generic long-range interactions between the bodies occur. We find these to be qualitatively different from other fluid mediated interactions, such as hydrodynamic or thermal Casimir. The interactions can be predicted by measuring a few single-body properties in separate experiments. Moreover, they are anisotropic and do not satisfy an action-reaction principle. These results extend previous results on non-interacting active particles. Our framework may point to a path towards self-assembly.

cond-mat.stat-mech