arXiv subjects

Oren Shriki

Publications and source records attributed to Oren Shriki.

6 recordsLinked to original sources

arXiv2026

EEGDash: An open-source platform for machine learning on public neurophysiological data

Public neurophysiological datasets are increasingly accessible but remain hard to reuse: turning one into a trained model still takes thousands of lines of code for download, loading, format repair, windowing, and evaluation, and a dataset that meets metadata standards can still fail to load. EEG-Dash is a software resource that catalogues 791 publicly archived recordings (39,778 participants, over 86,051 hours) spanning electroencephalography (EEG), magnetoencephalography (MEG), intracranial EEG (iEEG), electromyography (EMG), and functional near-infrared spectroscopy (fNIRS) from the OpenNeuro and NEMAR archives. It exposes each dataset as an importable, queryable class that preserves signal attributes and loads into machine-learning workflows without custom code, delegating signal handling to MNE-Python, windowing to Braindecode, and format compliance to the official Brain Imaging Data Structure (BIDS) validator. A metadata-first registry adds semantic search, a format-repair layer, automatic dataset-level tags drawn from each source publication, and a feature-extraction framework. The catalogue, with per-record loadability and compliance metadata, supports benchmarking, model development, and cross-dataset analysis.

q-bio.NC↗

arXiv2026

Scaling and tuning to criticality in resting-state human magnetoencephalography

From 1/f noise to neuronal avalanches, evidence of scaling in brain activity has been increasingly linked to tuning to or near criticality. The concept of scaling is intimately related to the renormalization group (RG), in essence providing coarse-grained, simplified descriptions that generalize to classes of diverse physical systems. Following the RG idea, scaling laws have been reported in populations of spiking neurons at microscopic scales. Whether similar scaling principles govern large-scale neural activity in the human brain and how they relate to underlying neural physiology remains unresolved. Here, we analyze large-scale electrophysiological recordings (MEG) of human resting-state brain activity and apply a RG-inspired coarse-graining approach to track collective neural dynamics across spatial scales. We find that multiple observables exhibit robust scale-invariant behavior under coarse-graining: activity variance and correlations grow according to power laws, covariance eigenspectra follow a characteristic scaling relation, and neuronal avalanche statistics remain invariant. Using an analytically tractable neural network model, we show that the observed scaling signatures arise when the system operates slightly below criticality, and that the scaling exponents depend on the excitation-inhibition balance. These findings demonstrate that RG-inspired scaling analysis can uncover signatures of critical dynamics in non-invasive human electrophysiology and suggest a principled route toward estimating excitation-inhibition balance from large-scale brain recordings.

q-bio.NC↗

arXiv2025

EEG Foundation Challenge: From Cross-Task to Cross-Subject EEG Decoding

Current electroencephalogram (EEG) decoding models are typically trained on small numbers of subjects performing a single task. Here, we introduce a large-scale, code-submission-based competition comprising two challenges. First, the Transfer Challenge asks participants to build and test a model that can zero-shot decode new tasks and new subjects from their EEG data. Second, the Psychopathology factor prediction Challenge asks participants to infer subject measures of mental health from EEG data. For this, we use an unprecedented, multi-terabyte dataset of high-density EEG signals (128 channels) recorded from over 3,000 child to young adult subjects engaged in multiple active and passive tasks. We provide several tunable neural network baselines for each of these two challenges, including a simple network and demographic-based regression models. Developing models that generalise across tasks and individuals will pave the way for ML network architectures capable of adapting to EEG data collected from diverse tasks and individuals. Similarly, predicting mental health-relevant personality trait values from EEG might identify objective biomarkers useful for clinical diagnosis and design of personalised treatment for psychological conditions. Ultimately, the advances spurred by this challenge could contribute to the development of computational psychiatry and useful neurotechnology, and contribute to breakthroughs in both fundamental neuroscience and applied clinical research.

eess.SP↗

arXiv2022

Statistical modeling of adaptive neural networks explains coexistence of avalanches and oscillations in resting human brain

Neurons in the brain are wired into adaptive networks that exhibit a range of collective dynamics. Oscillations, for example, are paradigmatic synchronous patterns of neural activity with a defined temporal scale. Neuronal avalanches, in contrast, are scale-free cascades of neural activity, often considered as evidence of brain tuning to criticality. While models have been developed to account for oscillations or avalanches separately, they typically do not explain both phenomena, are too complex to analyze analytically, or intractable to infer from data rigorously. Here we propose a non-equilibrium feedback-driven Ising like class of neural networks that simultaneously and quantitatively captures scale-free avalanches and scale-specific oscillations. In the most simple yet fully microscopic model version we can analytically compute the phase diagram and make direct contact with human brain resting-state activity recordings via tractable inference of the model's two essential parameters. The inferred model quantitatively captures the dynamics over a broad range of scales, from single sensor oscillations and collective behaviors of nearly-synchronous extreme events on multiple sensors, to neuronal avalanches unfolding over multiple sensors across multiple time bins. Importantly, the inferred parameters correlate with model-independent signatures of "closeness to criticality", indicating that the coexistence of scale-specific (neural oscillations) and scale-free (neuronal avalanches) dynamics in brain activity occurs close to a non-equilibrium critical point at the onset of self-sustained oscillations.

q-bio.NC↗

arXiv2018

An Analysis of the Accuracy of the P300 BCI

The P300 Brain-Computer Interface (BCI) is a well-established communication channel for severely disabled people. The P300 event-related potential is mostly characterized by its amplitude or its area, which correlate with the spelling accuracy of the P300 speller. Here, we introduce a novel approach for estimating the efficiency of this BCI by considering the P300 signal-to-noise ratio (SNR), a parameter that estimates the spatial and temporal noise levels and has a significantly stronger correlation with spelling accuracy. Furthermore, we suggest a Gaussian noise model, which utilizes the P300 event-related potential SNR to predict spelling accuracy under various conditions for LDA-based classification. We demonstrate the utility of this analysis using real data and discuss its potential applications, such as speeding up the process of electrode selection.

eess.SP↗

arXiv2013

Universal Organization of Resting Brain Activity at the Thermodynamic Critical Point

Thermodynamic criticality describes emergent phenomena in a wide variety of complex systems. In the mammalian brain, the complex dynamics that spontaneously emerge from neuronal interactions have been characterized as neuronal avalanches, a form of critical branching dynamics. Here, we show that neuronal avalanches also reflect that the brain dynamics are organized close to a thermodynamic critical point. We recorded spontaneous cortical activity in monkeys and humans at rest using high-density intracranial microelectrode arrays and magnetoencephalography, respectively. By numerically changing a control parameter equivalent to thermodynamic temperature, we observed typical critical behavior in cortical activities near the actual physiological condition, including the phase transition of an order parameter, as well as the divergence of susceptibility and specific heat. Finite-size scaling of these quantities allowed us to derive robust critical exponents highly consistent across monkey and humans that uncover a distinct, yet universal organization of brain dynamics.

physics.bio-ph↗