arXiv subjects

Otto Lamminpää

Publications and source records attributed to Otto Lamminpää.

5 recordsLinked to original sources

arXiv2025

Uncertainty calibration for latent-variable regression models

Uncertainty quantification is essential for scientific analysis, as it allows for the evaluation and interpretation of variability and reliability in complex systems and datasets. In their original form, multivariate statistical regression models (partial least-squares regression, PLS, principal component regression, PCR) along with their kernelized versions (kernel partial least-squares regression, K-PLS, kernel principal component regression, K-PCR), do not incorporate uncertainty quantification as part of their output. In this study, we propose a method inspired by conformal inference to estimate and calibrate the uncertainty of multivariate statistical models. The result of this method is a point prediction accompanied by prediction intervals that depend on the input data. We tested the proposed method on both traditional and kernelized versions of PLS and PCR. The method is demonstrated using synthetic data, as well as laboratory near-infrared (NIR) and airborne hyperspectral regression models for estimating functional plant traits. The model was able to successfully identify the uncertain regions in the simulated data and match the magnitude of the uncertainty. In real-case scenarios, the optimised model was not overconfident nor underconfident when estimating from test data: for example, for a 95% prediction interval, 95% of the true observations were inside the prediction interval.

stat.ME↗

arXiv2025

Conditional Diffusion-Based Retrieval of Atmospheric CO2 from Earth Observing Spectroscopy

Satellite-based estimates of greenhouse gas (GHG) properties from observations of reflected solar spectra are integral for understanding and monitoring complex terrestrial systems and their impact on the carbon cycle due to their near global coverage. Known as retrieval, making GHG concentration estimations from these observations is a non-linear Bayesian inverse problem, which is operationally solved using a computationally expensive algorithm called Optimal Estimation (OE), providing a Gaussian approximation to a non-Gaussian posterior. This leads to issues in solver algorithm convergence, and to unrealistically confident uncertainty estimates for the retrieved quantities. Upcoming satellite missions will provide orders of magnitude more data than the current constellation of GHG observers. Development of fast and accurate retrieval algorithms with robust uncertainty quantification is critical. Doing so stands to provide substantial climate impact of moving towards the goal of near continuous real-time global monitoring of carbon sources and sinks which is essential for policy making. To achieve this goal, we propose a diffusion-based approach to flexibly retrieve a Gaussian or non-Gaussian posterior, for NASA's Orbiting Carbon Observatory-2 spectrometer, while providing a substantial computational speed-up over the current operational state-of-the-art.

cs.LG↗

arXiv2024

Kernel-based retrieval models for hyperspectral image data optimized with Kernel Flows

Kernel-based statistical methods are efficient, but their performance depends heavily on the selection of kernel parameters. In literature, the optimization studies on kernel-based chemometric methods is limited and often reduced to grid searching. Previously, the authors introduced Kernel Flows (KF) to learn kernel parameters for Kernel Partial Least-Squares (K-PLS) regression. KF is easy to implement and helps minimize overfitting. In cases of high collinearity between spectra and biogeophysical quantities in spectroscopy, simpler methods like Principal Component Regression (PCR) may be more suitable. In this study, we propose a new KF-type approach to optimize Kernel Principal Component Regression (K-PCR) and test it alongside KF-PLS. Both methods are benchmarked against non-linear regression techniques using two hyperspectral remote sensing datasets.

cs.LG↗

arXiv2023

KF-PLS: Optimizing Kernel Partial Least-Squares (K-PLS) with Kernel Flows

Partial Least-Squares (PLS) Regression is a widely used tool in chemometrics for performing multivariate regression. PLS is a bi-linear method that has a limited capacity of modelling non-linear relations between the predictor variables and the response. Kernel PLS (K-PLS) has been introduced for modelling non-linear predictor-response relations. In K-PLS, the input data is mapped via a kernel function to a Reproducing Kernel Hilbert space (RKH), where the dependencies between the response and the input matrix are assumed to be linear. K-PLS is performed in the RKH space between the kernel matrix and the dependent variable. Most available studies use fixed kernel parameters. Only a few studies have been conducted on optimizing the kernel parameters for K-PLS. In this article, we propose a methodology for the kernel function optimization based on Kernel Flows (KF), a technique developed for Gaussian process regression (GPR). The results are illustrated with four case studies. The case studies represent both numerical examples and real data used in classification and regression tasks. K-PLS optimized with KF, called KF-PLS in this study, is shown to yield good results in all illustrated scenarios. The paper presents cross-validation studies and hyperparameter analysis of the KF methodology when applied to K-PLS.

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arXiv2018

Likelihood informed dimension reduction for inverse problems in remote sensing of atmospheric constituent profiles

We use likelihood informed dimension reduction (LIS) (T. Cui et al. 2014) for inverting vertical profile information of atmospheric methane from ground based Fourier transform infrared (FTIR) measurements at Sodankylä, Northern Finland. The measurements belong to the word wide TCCON network for greenhouse gas measurements and, in addition to providing accurate greenhouse gas measurements, they are important for validating satellite observations. LIS allows construction of an efficient Markov chain Monte Carlo sampling algorithm that explores only a reduced dimensional space but still produces a good approximation of the original full dimensional Bayesian posterior distribution. This in effect makes the statistical estimation problem independent of the discretization of the inverse problem. In addition, we compare LIS to a dimension reduction method based on prior covariance matrix truncation used earlier (S. Tukiainen et al. 2016).

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