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P. Jacques

Publications and source records attributed to P. Jacques.

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Setting up and modelling of overflowing fed-batch cultures of Bacillus subtilis for the production and continuous removal of lipopeptides

This work is related to the setup of overflowing exponential fed-batch cultures (O-EFBC) derived from carbon limited EFBC dedicated to the production of mycosubtilin, an antifungal lipopeptide belonging to the iturin family. O-EFBC permits the continuous removal of the product from the bioreactor achieving a complete extraction of mycosubtilin. This paper also provides a dynamical Monod-based growth model of this process that is accurate enough to simulate the evolution of the specific growth rate and to correlate it to the mycosubtilin specific productivity. Two particular and dependant phenomena related to the foam overflow are taken into account by the model: the outgoing flow rate of a broth volume and the loss of biomass. Interestingly, the biomass concentration in the foam was found to be lower than the biomass concentration in the bioreactor relating this process to a recycling one. Parameters of this model are the growth yield on substrate and the maximal specific growth rate estimated from experiments led at feed rates of 0.062, 0.071 and 0.086 h --1. The model was extrapolated to five additional experiments carried out at feed rates of 0.008, 0.022, 0.040, 0.042 and 0.062 h --1 enabling the correlation of the mean specific growth rates with productivity results. Finally, a feed rate of 0.086 h --1 corresponding to a mean specific growth rate of 0.070 h --1 allowed a specific productivity of 1.27 mg of mycosubtilin g --1 of dried biomass h --1 .

q-bio.BM

Grid Based Monitoring on the Rutgers CDF Analysis Farm

Run II at the Fermilab Tevatron Collider started in March 2001, and it will continue probing the high energy frontier in particle physics until the start of the LHC at CERN. The CDF collaboration at Fermilab has already stored 260 TB of data and expects to store 1PB of data in the next two years. The HEXCAF computing farm is being set up at Rutgers University to provide the software environment, computing resources, and access to data for physicists participating in the Collaboration. Some job submission, detector data access and storage of the output results are based on the SAM-GRID tools. To extend monitoring for these jobs running on the farm a bridge was developed between the SAM-GRID monitoring tools and the internal farm monitoring. This presentation will describe the configuration and functionality of the HEXCAF farm with the emphasis on the monitoring tools. Finally we summarize our experience of installing and operating a GRID environment on a remote cluster that is being used for real physics studies in the big running experiment.

physics.comp-ph