SearcharxivSearch

arXiv subjects

Patrick R. Lawler

Publications and source records attributed to Patrick R. Lawler.

3 recordsLinked to original sources

Assumption-Lean Differential Variance Inference for Heterogeneous Treatment Effect Detection

The conditional average treatment effect (CATE) is frequently estimated in clinical studies to refute a homogeneous treatment effect hypothesis. Under this regime, all patients making up the population experience identical benefit from a given treatment relative to a comparator. Uncovering heterogeneous treatment effects through inference about the CATE, however, requires that covariates truly modifying the treatment effect be reliably collected at baseline. CATE-based techniques will necessarily fail to detect violations when effect modifiers are omitted from the data due to, for example, resource constraints. Severe measurement error has a similar impact. Clinical decision makers can be misled as a result. To address these limitations, we prove that a practical homogeneous treatment effect hypothesis can be gauged through inference about contrasts of the potential outcomes' variances even when effect modifiers are missing from the data. We derive causal machine learning estimators of these contrasts and study their asymptotic properties. We establish that these estimators are doubly robust and asymptotically linear under mild conditions, permitting formal hypothesis testing about the treatment effect heterogeneity. Numerical experiments demonstrate that these estimators' asymptotic guarantees are approximately achieved in finite-sample randomized and observational study data alike. These inference procedures are then used to detect heterogeneous treatment effects in the re-analysis of randomized controlled trials investigating targeted temperature management in cardiac arrest patients.

stat.ME

WangLab at MEDIQA-CORR 2024: Optimized LLM-based Programs for Medical Error Detection and Correction

Medical errors in clinical text pose significant risks to patient safety. The MEDIQA-CORR 2024 shared task focuses on detecting and correcting these errors across three subtasks: identifying the presence of an error, extracting the erroneous sentence, and generating a corrected sentence. In this paper, we present our approach that achieved top performance in all three subtasks. For the MS dataset, which contains subtle errors, we developed a retrieval-based system leveraging external medical question-answering datasets. For the UW dataset, reflecting more realistic clinical notes, we created a pipeline of modules to detect, localize, and correct errors. Both approaches utilized the DSPy framework for optimizing prompts and few-shot examples in large language model (LLM) based programs. Our results demonstrate the effectiveness of LLM based programs for medical error correction. However, our approach has limitations in addressing the full diversity of potential errors in medical documentation. We discuss the implications of our work and highlight future research directions to advance the robustness and applicability of medical error detection and correction systems.

cs.CL

Clinical Camel: An Open Expert-Level Medical Language Model with Dialogue-Based Knowledge Encoding

We present Clinical Camel, an open large language model (LLM) explicitly tailored for clinical research. Fine-tuned from LLaMA-2 using QLoRA, Clinical Camel achieves state-of-the-art performance across medical benchmarks among openly available medical LLMs. Leveraging efficient single-GPU training, Clinical Camel surpasses GPT-3.5 in five-shot evaluations on all assessed benchmarks, including 64.3% on the USMLE Sample Exam (compared to 58.5% for GPT-3.5), 77.9% on PubMedQA (compared to 60.2%), 60.7% on MedQA (compared to 53.6%), and 54.2% on MedMCQA (compared to 51.0%). In addition to these benchmarks, Clinical Camel demonstrates its broader capabilities, such as synthesizing plausible clinical notes. This work introduces dialogue-based knowledge encoding, a novel method to synthesize conversational data from dense medical texts. While benchmark results are encouraging, extensive and rigorous human evaluation across diverse clinical scenarios is imperative to ascertain safety before implementation. By openly sharing Clinical Camel, we hope to foster transparent and collaborative research, working towards the safe integration of LLMs within the healthcare domain. Significant challenges concerning reliability, bias, and the potential for outdated knowledge persist. Nonetheless, the transparency provided by an open approach reinforces the scientific rigor essential for future clinical applications.

cs.CL