arXiv subjects

Paul E. Chang

Publications and source records attributed to Paul E. Chang.

8 recordsLinked to original sources

arXiv2026

Efficient Autoregressive Inference for Transformer Probabilistic Models

Set-based transformer models for amortized probabilistic inference and meta-learning, such as neural processes, prior-fitted networks, and tabular foundation models, excel at single-pass marginal prediction. However, many applications require joint distributions over multiple predictions. Purely autoregressive architectures generate these efficiently but sacrifice flexible set-conditioning. Obtaining joint distributions from set-based models requires re-encoding the entire context at each autoregressive step, which scales poorly. We introduce a causal autoregressive buffer that combines the strengths of both paradigms. The model encodes the context once and caches it; a lightweight causal buffer captures dependencies among generated targets, with each new prediction attending to both the cached context and all previously predicted targets added to the buffer. This enables efficient batched autoregressive sampling and joint predictive density evaluation. Training integrates set-based and autoregressive modes through masked attention at minimal overhead. Across synthetic functions, EEG time series, a Bayesian model comparison task, and tabular regression, our method closely matches the performance of full context re-encoding while delivering up to $20\times$ faster joint sampling and density evaluation, and up to $7\times$ lower memory usage.

stat.ML↗

arXiv2026

PriorGuide: Test-Time Prior Adaptation for Simulation-Based Inference

Amortized simulator-based inference offers a powerful framework for tackling Bayesian inference in computational fields such as engineering or neuroscience, increasingly leveraging modern generative methods like diffusion models to map observed data to model parameters or future predictions. These approaches yield posterior or posterior-predictive samples for new datasets without requiring further simulator calls after training on simulated parameter-data pairs. However, their applicability is often limited by the prior distribution(s) used to generate model parameters during this training phase. To overcome this constraint, we introduce PriorGuide, a technique specifically designed for diffusion-based amortized inference methods. PriorGuide leverages a novel guidance approximation that enables flexible adaptation of the trained diffusion model to new priors at test time, crucially without costly retraining. This allows users to readily incorporate updated information or expert knowledge post-training, enhancing the versatility of pre-trained inference models.

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arXiv2025

Amortized Probabilistic Conditioning for Optimization, Simulation and Inference

Amortized meta-learning methods based on pre-training have propelled fields like natural language processing and vision. Transformer-based neural processes and their variants are leading models for probabilistic meta-learning with a tractable objective. Often trained on synthetic data, these models implicitly capture essential latent information in the data-generation process. However, existing methods do not allow users to flexibly inject (condition on) and extract (predict) this probabilistic latent information at runtime, which is key to many tasks. We introduce the Amortized Conditioning Engine (ACE), a new transformer-based meta-learning model that explicitly represents latent variables of interest. ACE affords conditioning on both observed data and interpretable latent variables, the inclusion of priors at runtime, and outputs predictive distributions for discrete and continuous data and latents. We show ACE's modeling flexibility and performance in diverse tasks such as image completion and classification, Bayesian optimization, and simulation-based inference.

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arXiv2023

Memory-Based Dual Gaussian Processes for Sequential Learning

Sequential learning with Gaussian processes (GPs) is challenging when access to past data is limited, for example, in continual and active learning. In such cases, errors can accumulate over time due to inaccuracies in the posterior, hyperparameters, and inducing points, making accurate learning challenging. Here, we present a method to keep all such errors in check using the recently proposed dual sparse variational GP. Our method enables accurate inference for generic likelihoods and improves learning by actively building and updating a memory of past data. We demonstrate its effectiveness in several applications involving Bayesian optimization, active learning, and continual learning.

cs.LG↗

arXiv2022

Fantasizing with Dual GPs in Bayesian Optimization and Active Learning

Gaussian processes (GPs) are the main surrogate functions used for sequential modelling such as Bayesian Optimization and Active Learning. Their drawbacks are poor scaling with data and the need to run an optimization loop when using a non-Gaussian likelihood. In this paper, we focus on `fantasizing' batch acquisition functions that need the ability to condition on new fantasized data computationally efficiently. By using a sparse Dual GP parameterization, we gain linear scaling with batch size as well as one-step updates for non-Gaussian likelihoods, thus extending sparse models to greedy batch fantasizing acquisition functions.

cs.LG↗

arXiv2022

Dual Parameterization of Sparse Variational Gaussian Processes

Sparse variational Gaussian process (SVGP) methods are a common choice for non-conjugate Gaussian process inference because of their computational benefits. In this paper, we improve their computational efficiency by using a dual parameterization where each data example is assigned dual parameters, similarly to site parameters used in expectation propagation. Our dual parameterization speeds-up inference using natural gradient descent, and provides a tighter evidence lower bound for hyperparameter learning. The approach has the same memory cost as the current SVGP methods, but it is faster and more accurate.

cs.LG↗

arXiv2020

Fast Variational Learning in State-Space Gaussian Process Models

Gaussian process (GP) regression with 1D inputs can often be performed in linear time via a stochastic differential equation formulation. However, for non-Gaussian likelihoods, this requires application of approximate inference methods which can make the implementation difficult, e.g., expectation propagation can be numerically unstable and variational inference can be computationally inefficient. In this paper, we propose a new method that removes such difficulties. Building upon an existing method called conjugate-computation variational inference, our approach enables linear-time inference via Kalman recursions while avoiding numerical instabilities and convergence issues. We provide an efficient JAX implementation which exploits just-in-time compilation and allows for fast automatic differentiation through large for-loops. Overall, our approach leads to fast and stable variational inference in state-space GP models that can be scaled to time series with millions of data points.

cs.LG↗

arXiv2020

State Space Expectation Propagation: Efficient Inference Schemes for Temporal Gaussian Processes

We formulate approximate Bayesian inference in non-conjugate temporal and spatio-temporal Gaussian process models as a simple parameter update rule applied during Kalman smoothing. This viewpoint encompasses most inference schemes, including expectation propagation (EP), the classical (Extended, Unscented, etc.) Kalman smoothers, and variational inference. We provide a unifying perspective on these algorithms, showing how replacing the power EP moment matching step with linearisation recovers the classical smoothers. EP provides some benefits over the traditional methods via introduction of the so-called cavity distribution, and we combine these benefits with the computational efficiency of linearisation, providing extensive empirical analysis demonstrating the efficacy of various algorithms under this unifying framework. We provide a fast implementation of all methods in JAX.

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