SearcharxivSearch

arXiv subjects

Paulo C. Godolphim

Publications and source records attributed to Paulo C. Godolphim.

2 recordsLinked to original sources

Stress tensor field and mesoscopic stresses in the vertex model for tissues

Mechanical stresses are fundamental regulators in biological tissues, where the vertex model (VM) is pivotal for theoretical and force-inference studies. Yet, no uniform expression for the stress tensor exists for the VM. Here we provide a microscopic derivation of it, linking mesoscopic stresses to the VM forces. The stress field presents a freedom on how tensions are distributed across cells, which allows previous expressions to emerge as particular realizations of the field and suggests a link between mesoscopic stresses and cytoskeletal force-transmission architectures in real cells.

cond-mat.soft

Parameter degeneracy in the vertex model for tissues

The vertex model with homogeneous cell properties is known to exhibit a parameter degeneracy in which the system's dynamics is independent of the target area. Here, we show, for the heterogeneous vertex model where cells differ in size and stiffness, that degeneracy is also present with the average product of target areas and stiffness becoming dynamically irrelevant. Fixing this quantity is equivalent to fixing the global internal tissue pressure. Unless properly treated, this degeneracy undermines the physical relevance of key observables' numerical values, such as cell target shape index, cell pressure, and cell stress tensor. We present methods to resolve the degeneracy and to correctly set the gauge pressure via symmetry transformations applied to the cells' target areas. We further demonstrate that the degeneracy is removed under certain boundary conditions and partially lifted when spherical tissues are modeled using a locally planar approximation, leading to numerical consequences when fitting model parameters to experimental data. The approach extends beyond vertex models and provides a framework for testing whether the parameter spaces of other physical models are free from degeneracy.

cond-mat.soft