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Pengtao Xie

Publications and source records attributed to Pengtao Xie.

At least 73 records · Page 4Linked to original sources

Multimodal Machine Learning for Automated ICD Coding

This study presents a multimodal machine learning model to predict ICD-10 diagnostic codes. We developed separate machine learning models that can handle data from different modalities, including unstructured text, semi-structured text and structured tabular data. We further employed an ensemble method to integrate all modality-specific models to generate ICD-10 codes. Key evidence was also extracted to make our prediction more convincing and explainable. We used the Medical Information Mart for Intensive Care III (MIMIC -III) dataset to validate our approach. For ICD code prediction, our best-performing model (micro-F1 = 0.7633, micro-AUC = 0.9541) significantly outperforms other baseline models including TF-IDF (micro-F1 = 0.6721, micro-AUC = 0.7879) and Text-CNN model (micro-F1 = 0.6569, micro-AUC = 0.9235). For interpretability, our approach achieves a Jaccard Similarity Coefficient (JSC) of 0.1806 on text data and 0.3105 on tabular data, where well-trained physicians achieve 0.2780 and 0.5002 respectively.

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Not All Patches are What You Need: Expediting Vision Transformers via Token Reorganizations

Vision Transformers (ViTs) take all the image patches as tokens and construct multi-head self-attention (MHSA) among them. Complete leverage of these image tokens brings redundant computations since not all the tokens are attentive in MHSA. Examples include that tokens containing semantically meaningless or distractive image backgrounds do not positively contribute to the ViT predictions. In this work, we propose to reorganize image tokens during the feed-forward process of ViT models, which is integrated into ViT during training. For each forward inference, we identify the attentive image tokens between MHSA and FFN (i.e., feed-forward network) modules, which is guided by the corresponding class token attention. Then, we reorganize image tokens by preserving attentive image tokens and fusing inattentive ones to expedite subsequent MHSA and FFN computations. To this end, our method EViT improves ViTs from two perspectives. First, under the same amount of input image tokens, our method reduces MHSA and FFN computation for efficient inference. For instance, the inference speed of DeiT-S is increased by 50% while its recognition accuracy is decreased by only 0.3% for ImageNet classification. Second, by maintaining the same computational cost, our method empowers ViTs to take more image tokens as input for recognition accuracy improvement, where the image tokens are from higher resolution images. An example is that we improve the recognition accuracy of DeiT-S by 1% for ImageNet classification at the same computational cost of a vanilla DeiT-S. Meanwhile, our method does not introduce more parameters to ViTs. Experiments on the standard benchmarks show the effectiveness of our method. The code is available at https://github.com/youweiliang/evit

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Learning from Mistakes based on Class Weighting with Application to Neural Architecture Search

Learning from mistakes is an effective learning approach widely used in human learning, where a learner pays greater focus on mistakes to circumvent them in the future to improve the overall learning outcomes. In this work, we aim to investigate how effectively we can leverage this exceptional learning ability to improve machine learning models. We propose a simple and effective multi-level optimization framework called learning from mistakes using class weighting (LFM-CW), inspired by mistake-driven learning to train better machine learning models. In this formulation, the primary objective is to train a model to perform effectively on target tasks by using a re-weighting technique. We learn the class weights by minimizing the validation loss of the model and re-train the model with the synthetic data from the image generator weighted by class-wise performance and real data. We apply our LFM-CW framework with differential architecture search methods on image classification datasets such as CIFAR and ImageNet, where the results show that our proposed strategy achieves lower error rate than the baselines.

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Learning from Mistakes -- A Framework for Neural Architecture Search

Learning from one's mistakes is an effective human learning technique where the learners focus more on the topics where mistakes were made, so as to deepen their understanding. In this paper, we investigate if this human learning strategy can be applied in machine learning. We propose a novel machine learning method called Learning From Mistakes (LFM), wherein the learner improves its ability to learn by focusing more on the mistakes during revision. We formulate LFM as a three-stage optimization problem: 1) learner learns; 2) learner re-learns focusing on the mistakes, and; 3) learner validates its learning. We develop an efficient algorithm to solve the LFM problem. We apply the LFM framework to neural architecture search on CIFAR-10, CIFAR-100, and Imagenet. Experimental results strongly demonstrate the effectiveness of our model.

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Self-directed Machine Learning

Conventional machine learning (ML) relies heavily on manual design from machine learning experts to decide learning tasks, data, models, optimization algorithms, and evaluation metrics, which is labor-intensive, time-consuming, and cannot learn autonomously like humans. In education science, self-directed learning, where human learners select learning tasks and materials on their own without requiring hands-on guidance, has been shown to be more effective than passive teacher-guided learning. Inspired by the concept of self-directed human learning, we introduce the principal concept of Self-directed Machine Learning (SDML) and propose a framework for SDML. Specifically, we design SDML as a self-directed learning process guided by self-awareness, including internal awareness and external awareness. Our proposed SDML process benefits from self task selection, self data selection, self model selection, self optimization strategy selection and self evaluation metric selection through self-awareness without human guidance. Meanwhile, the learning performance of the SDML process serves as feedback to further improve self-awareness. We propose a mathematical formulation for SDML based on multi-level optimization. Furthermore, we present case studies together with potential applications of SDML, followed by discussing future research directions. We expect that SDML could enable machines to conduct human-like self-directed learning and provide a new perspective towards artificial general intelligence.

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TreeGAN: Incorporating Class Hierarchy into Image Generation

Conditional image generation (CIG) is a widely studied problem in computer vision and machine learning. Given a class, CIG takes the name of this class as input and generates a set of images that belong to this class. In existing CIG works, for different classes, their corresponding images are generated independently, without considering the relationship among classes. In real-world applications, the classes are organized into a hierarchy and their hierarchical relationships are informative for generating high-fidelity images. In this paper, we aim to leverage the class hierarchy for conditional image generation. We propose two ways of incorporating class hierarchy: prior control and post constraint. In prior control, we first encode the class hierarchy, then feed it as a prior into the conditional generator to generate images. In post constraint, after the images are generated, we measure their consistency with the class hierarchy and use the consistency score to guide the training of the generator. Based on these two ideas, we propose a TreeGAN model which consists of three modules: (1) a class hierarchy encoder (CHE) which takes the hierarchical structure of classes and their textual names as inputs and learns an embedding for each class; the embedding captures the hierarchical relationship among classes; (2) a conditional image generator (CIG) which takes the CHE-generated embedding of a class as input and generates a set of images belonging to this class; (3) a consistency checker which performs hierarchical classification on the generated images and checks whether the generated images are compatible with the class hierarchy; the consistency score is used to guide the CIG to generate hierarchy-compatible images. Experiments on various datasets demonstrate the effectiveness of our method.

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Improving Differentiable Architecture Search with a Generative Model

In differentiable neural architecture search (NAS) algorithms like DARTS, the training set used to update model weight and the validation set used to update model architectures are sampled from the same data distribution. Thus, the uncommon features in the dataset fail to receive enough attention during training. In this paper, instead of introducing more complex NAS algorithms, we explore the idea that adding quality synthesized datasets into training can help the classification model identify its weakness and improve recognition accuracy. We introduce a training strategy called ``Differentiable Architecture Search with a Generative Model(DASGM)." In DASGM, the training set is used to update the classification model weight, while a synthesized dataset is used to train its architecture. The generated images have different distributions from the training set, which can help the classification model learn better features to identify its weakness. We formulate DASGM into a multi-level optimization framework and develop an effective algorithm to solve it. Experiments on CIFAR-10, CIFAR-100, and ImageNet have demonstrated the effectiveness of DASGM. Code will be made available.

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Learning by Examples Based on Multi-level Optimization

Learning by examples, which learns to solve a new problem by looking into how similar problems are solved, is an effective learning method in human learning. When a student learns a new topic, he/she finds out exemplar topics that are similar to this new topic and studies the exemplar topics to deepen the understanding of the new topic. We aim to investigate whether this powerful learning skill can be borrowed from humans to improve machine learning as well. In this work, we propose a novel learning approach called Learning By Examples (LBE). Our approach automatically retrieves a set of training examples that are similar to query examples and predicts labels for query examples by using class labels of the retrieved examples. We propose a three-level optimization framework to formulate LBE which involves three stages of learning: learning a Siamese network to retrieve similar examples; learning a matching network to make predictions on query examples by leveraging class labels of retrieved similar examples; learning the ``ground-truth'' similarities between training examples by minimizing the validation loss. We develop an efficient algorithm to solve the LBE problem and conduct extensive experiments on various benchmarks where the results demonstrate the effectiveness of our method on both supervised and few-shot learning.

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Self-supervised Regularization for Text Classification

Text classification is a widely studied problem and has broad applications. In many real-world problems, the number of texts for training classification models is limited, which renders these models prone to overfitting. To address this problem, we propose SSL-Reg, a data-dependent regularization approach based on self-supervised learning (SSL). SSL is an unsupervised learning approach which defines auxiliary tasks on input data without using any human-provided labels and learns data representations by solving these auxiliary tasks. In SSL-Reg, a supervised classification task and an unsupervised SSL task are performed simultaneously. The SSL task is unsupervised, which is defined purely on input texts without using any human-provided labels. Training a model using an SSL task can prevent the model from being overfitted to a limited number of class labels in the classification task. Experiments on 17 text classification datasets demonstrate the effectiveness of our proposed method.

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Learning by Passing Tests, with Application to Neural Architecture Search

Learning through tests is a broadly used methodology in human learning and shows great effectiveness in improving learning outcome: a sequence of tests are made with increasing levels of difficulty; the learner takes these tests to identify his/her weak points in learning and continuously addresses these weak points to successfully pass these tests. We are interested in investigating whether this powerful learning technique can be borrowed from humans to improve the learning abilities of machines. We propose a novel learning approach called learning by passing tests (LPT). In our approach, a tester model creates increasingly more-difficult tests to evaluate a learner model. The learner tries to continuously improve its learning ability so that it can successfully pass however difficult tests created by the tester. We propose a multi-level optimization framework to formulate LPT, where the tester learns to create difficult and meaningful tests and the learner learns to pass these tests. We develop an efficient algorithm to solve the LPT problem. Our method is applied for neural architecture search and achieves significant improvement over state-of-the-art baselines on CIFAR-100, CIFAR-10, and ImageNet.

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Skillearn: Machine Learning Inspired by Humans' Learning Skills

Humans, as the most powerful learners on the planet, have accumulated a lot of learning skills, such as learning through tests, interleaving learning, self-explanation, active recalling, to name a few. These learning skills and methodologies enable humans to learn new topics more effectively and efficiently. We are interested in investigating whether humans' learning skills can be borrowed to help machines to learn better. Specifically, we aim to formalize these skills and leverage them to train better machine learning (ML) models. To achieve this goal, we develop a general framework -- Skillearn, which provides a principled way to represent humans' learning skills mathematically and use the formally-represented skills to improve the training of ML models. In two case studies, we apply Skillearn to formalize two learning skills of humans: learning by passing tests and interleaving learning, and use the formalized skills to improve neural architecture search. Experiments on various datasets show that trained using the skills formalized by Skillearn, ML models achieve significantly better performance.

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Interleaving Learning, with Application to Neural Architecture Search

Interleaving learning is a human learning technique where a learner interleaves the studies of multiple topics, which increases long-term retention and improves ability to transfer learned knowledge. Inspired by the interleaving learning technique of humans, in this paper we explore whether this learning methodology is beneficial for improving the performance of machine learning models as well. We propose a novel machine learning framework referred to as interleaving learning (IL). In our framework, a set of models collaboratively learn a data encoder in an interleaving fashion: the encoder is trained by model 1 for a while, then passed to model 2 for further training, then model 3, and so on; after trained by all models, the encoder returns back to model 1 and is trained again, then moving to model 2, 3, etc. This process repeats for multiple rounds. Our framework is based on multi-level optimization consisting of multiple inter-connected learning stages. An efficient gradient-based algorithm is developed to solve the multi-level optimization problem. We apply interleaving learning to search neural architectures for image classification on CIFAR-10, CIFAR-100, and ImageNet. The effectiveness of our method is strongly demonstrated by the experimental results.

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Small-Group Learning, with Application to Neural Architecture Search

In human learning, an effective learning methodology is small-group learning: a small group of students work together towards the same learning objective, where they express their understanding of a topic to their peers, compare their ideas, and help each other to trouble-shoot problems. In this paper, we aim to investigate whether this human learning method can be borrowed to train better machine learning models, by developing a novel ML framework -- small-group learning (SGL). In our framework, a group of learners (ML models) with different model architectures collaboratively help each other to learn by leveraging their complementary advantages. Specifically, each learner uses its intermediately trained model to generate a pseudo-labeled dataset and re-trains its model using pseudo-labeled datasets generated by other learners. SGL is formulated as a multi-level optimization framework consisting of three learning stages: each learner trains a model independently and uses this model to perform pseudo-labeling; each learner trains another model using datasets pseudo-labeled by other learners; learners improve their architectures by minimizing validation losses. An efficient algorithm is developed to solve the multi-level optimization problem. We apply SGL for neural architecture search. Results on CIFAR-100, CIFAR-10, and ImageNet demonstrate the effectiveness of our method.

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Learning by Self-Explanation, with Application to Neural Architecture Search

Learning by self-explanation is an effective learning technique in human learning, where students explain a learned topic to themselves for deepening their understanding of this topic. It is interesting to investigate whether this explanation-driven learning methodology broadly used by humans is helpful for improving machine learning as well. Based on this inspiration, we propose a novel machine learning method called learning by self-explanation (LeaSE). In our approach, an explainer model improves its learning ability by trying to clearly explain to an audience model regarding how a prediction outcome is made. LeaSE is formulated as a four-level optimization problem involving a sequence of four learning stages which are conducted end-to-end in a unified framework: 1) explainer learns; 2) explainer explains; 3) audience learns; 4) explainer re-learns based on the performance of the audience. We develop an efficient algorithm to solve the LeaSE problem. We apply LeaSE for neural architecture search on CIFAR-100, CIFAR-10, and ImageNet. Experimental results strongly demonstrate the effectiveness of our method.

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Learning by Ignoring, with Application to Domain Adaptation

Learning by ignoring, which identifies less important things and excludes them from the learning process, is broadly practiced in human learning and has shown ubiquitous effectiveness. There has been psychological studies showing that learning to ignore certain things is a powerful tool for helping people focus. In this paper, we explore whether this useful human learning methodology can be borrowed to improve machine learning. We propose a novel machine learning framework referred to as learning by ignoring (LBI). Our framework automatically identifies pretraining data examples that have large domain shift from the target distribution by learning an ignoring variable for each example and excludes them from the pretraining process. We formulate LBI as a three-level optimization framework where three learning stages are involved: pretraining by minimizing the losses weighed by ignoring variables; finetuning; updating the ignoring variables by minimizing the validation loss. A gradient-based algorithm is developed to efficiently solve the three-level optimization problem in LBI. Experiments on various datasets demonstrate the effectiveness of our framework.

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Learning by Teaching, with Application to Neural Architecture Search

In human learning, an effective skill in improving learning outcomes is learning by teaching: a learner deepens his/her understanding of a topic by teaching this topic to others. In this paper, we aim to borrow this teaching-driven learning methodology from humans and leverage it to train more performant machine learning models, by proposing a novel ML framework referred to as learning by teaching (LBT). In the LBT framework, a teacher model improves itself by teaching a student model to learn well. Specifically, the teacher creates a pseudo-labeled dataset and uses it to train a student model. Based on how the student performs on a validation dataset, the teacher re-learns its model and re-teaches the student until the student achieves great validation performance. Our framework is based on three-level optimization which contains three stages: teacher learns; teacher teaches student; teacher re-learns based on how well the student performs. A simple but efficient algorithm is developed to solve the three-level optimization problem. We apply LBT to search neural architectures on CIFAR-10, CIFAR-100, and ImageNet. The efficacy of our method is demonstrated in various experiments.

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DSRNA: Differentiable Search of Robust Neural Architectures

In deep learning applications, the architectures of deep neural networks are crucial in achieving high accuracy. Many methods have been proposed to search for high-performance neural architectures automatically. However, these searched architectures are prone to adversarial attacks. A small perturbation of the input data can render the architecture to change prediction outcomes significantly. To address this problem, we propose methods to perform differentiable search of robust neural architectures. In our methods, two differentiable metrics are defined to measure architectures' robustness, based on certified lower bound and Jacobian norm bound. Then we search for robust architectures by maximizing the robustness metrics. Different from previous approaches which aim to improve architectures' robustness in an implicit way: performing adversarial training and injecting random noise, our methods explicitly and directly maximize robustness metrics to harvest robust architectures. On CIFAR-10, ImageNet, and MNIST, we perform game-based evaluation and verification-based evaluation on the robustness of our methods. The experimental results show that our methods 1) are more robust to various norm-bound attacks than several robust NAS baselines; 2) are more accurate than baselines when there are no attacks; 3) have significantly higher certified lower bounds than baselines.

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Validate and Enable Machine Learning in Industrial AI

Industrial Artificial Intelligence (Industrial AI) is an emerging concept which refers to the application of artificial intelligence to industry. Industrial AI promises more efficient future industrial control systems. However, manufacturers and solution partners need to understand how to implement and integrate an AI model into the existing industrial control system. A well-trained machine learning (ML) model provides many benefits and opportunities for industrial control optimization; however, an inferior Industrial AI design and integration limits the capability of ML models. To better understand how to develop and integrate trained ML models into the traditional industrial control system, test the deployed AI control system, and ultimately outperform traditional systems, manufacturers and their AI solution partners need to address a number of challenges. Six top challenges, which were real problems we ran into when deploying Industrial AI, are explored in the paper. The Petuum Optimum system is used as an example to showcase the challenges in making and testing AI models, and more importantly, how to address such challenges in an Industrial AI system.

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