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Peter R. Thompson

Publications and source records attributed to Peter R. Thompson.

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Simulating how animals learn: a new modelling framework applied to the process of optimal foraging

Animal learning has interested ecologists and psychologists for over a century. Mathematical models that explain how animals store and recall information have gained attention recently. Central to this work is statistical decision theory (SDT), which relates information uptake in animals to Bayesian inference. SDT effectively explains many learning tasks in animals, but extending this theory to predict how animals will learn in changing environments still poses a challenge for ecologists. We addressed this shortcoming with a novel implementation of Bayesian Markov Chain Monte Carlo (MCMC) sampling to simulate how animals sample environmental information and learn as a result. We applied our framework to an individual-based model simulating complex foraging tasks encountered by wild animals. Simulated ``animals" learned behavioral strategies that optimized foraging returns simply by following the principles of an MCMC sampler. In these simulations, behavioral plasticity was most conducive to efficient foraging in unpredictable and uncertain environments. Our model suggests that animals prioritize highly concentrated resources even when these resources are less available overall, in line with existing knowledge on optimal foraging and ideal free distribution theory. Our innovative computational modelling framework can be applied more widely to simulate the learning of many other tasks in animals and humans.

q-bio.QM

Detecting seasonal episodic-like spatiotemporal memory patterns using animal movement modelling

1. Spatial memory plays a role in the way animals perceive their environments, resulting in memory-informed movement patterns that are observable to ecologists. Developing mathematical techniques to understand how animals use memory in their environments allows for an increased understanding of animal cognition. 2. Here we describe a model that accounts for the memory of seasonal or ephemeral qualities of an animal's environment. The model captures multiple behaviors at once by allowing for resource selection in the present time as well as long-distance navigations to previously visited locations within an animal's home range. 3. We performed a set of analyses on simulated data to test our model, determining that it can provide informative results from as little as one year of discrete-time location data. We also show that the accuracy of model selection and parameter estimation increases with more location data. 4. This model has potential to identify a specific mechanism in which animals use memory to optimize their foraging, by revisiting temporally and predictably variable resources at consistent time lags.

q-bio.QM