arXiv subjects

Peter Török

Publications and source records attributed to Peter Török.

10 recordsLinked to original sources

arXiv2026

Characterisation of the signal to noise ratio of 2-photon microscopes

Signal to noise ratio (SNR) is a key performance metric of an imaging instrument. Here we describe characterisation of SNR of a custom 2-photon microscope and compare the SNR performance of our microscope with selected commercial 2-photon microscopes. The methodology described in this paper can serve as guidance for others wishing to characterise and benchmark their 2-photon or other point-scanning microscopes.

physics.optics↗

arXiv2025

A simple, robust and cost-effective method to achieve dispersion matching in swept source OCT

Optical path length and dispersion matching in both measurement and reference arms of an OCT system is critical for achieving bandwidth-limited axial resolution. To minimize or eliminate dispersion mismatch, most, if not all, fiber-based OCT realisations employ a reference arm configuration that is as closely identical to the measurement arm as possible. This typically includes a collimator, dispersion compensating material (or sometimes a set of lenses), as well as a mirror (or retro-reflector) mounted on a translation stage. However, this solution makes the total instrument cost higher and the setup bulkier than necessary and it also renders the reference arm mechanically unstable. Here, a simple yet robust, low-cost reference arm setup is presented and its ability to compensate for measurement arm dispersion is demonstrated. We use a single-mode fiber cleaved and polished perpendicular to the fiber axis to construct the reference arm. The length and material of the fibre is determined by considering the optical path length and dispersion of the measurement arm. Experimental images demonstrate the operation of the novel reference arm in our Swept-source Optical Coherence Tomography.

physics.optics↗

arXiv2024

Consensus Statement on Brillouin Light Scattering Microscopy of Biological Materials

Brillouin Light Scattering (BLS) spectroscopy is a non-invasive, non-contact, label-free optical technique that can provide information on the mechanical properties of a material on the sub-micron scale. Over the last decade it has seen increased applications in the life sciences, driven by the observed significance of mechanical properties in biological processes, the realization of more sensitive BLS spectrometers and its extension to an imaging modality. As with other spectroscopic techniques, BLS measurements not only detect signals characteristic of the investigated sample, but also of the experimental apparatus, and can be significantly affected by measurement conditions. The aim of this consensus statement is to improve the comparability of BLS studies by providing reporting recommendations for the measured parameters and detailing common artifacts. Given that most BLS studies of biological matter are still at proof-of-concept stages and use different--often self-built--spectrometers, a consensus statement is particularly timely to assure unified advancement.

physics.optics↗

arXiv2020

Multivariate analysis of Brillouin imaging data by supervised and unsupervised learning

Brillouin imaging relies on the reliable extraction of subtle spectral information from hyperspectral datasets. To date, the mainstream practice has been using line fitting of spectral features to retrieve the average peak shift and linewidth parameters. Good results, however, depend heavily on sufficient SNR and may not be applicable in complex samples that consist of spectral mixtures. In this work, we thus propose the use of various multivariate algorithms that can be used to perform supervised or unsupervised analysis of the hyperspectral data, with which we explore advanced image analysis applications, namely unmixing, classification and segmentation in a phantom and live cells. The resulting images are shown to provide more contrast and detail, and obtained on a timescale $10^2$ faster than fitting. The estimated spectral parameters are consistent with those calculated from pure fitting.

eess.IV↗

arXiv2020

Single Pixel Polarimetric Imaging through Scattering Media

Polarimetric imaging can provide valuable information about biological samples in a wide range of applications. Detrimental scattering however currently limits the imaging depth of in-vivo imaging to approximately 1 transport mean free path. In this work, single pixel imaging is investigated as a means of reconstructing polarimetric images through scattering media. A theoretical imaging model is presented and the recovery of the spatially resolved Mueller matrix of a hidden test object is demonstrated experimentally for scattering phantoms with thicknesses up to twice the transport mean free path.

physics.optics↗

arXiv2020

Background-free fibre optic Brillouin probe for remote mapping of micromechanics

Brillouin spectroscopy is a century-old technique that has recently received renewed interest, as modern instrumentation has transformed it into a powerful contactless and label-free probe of micromechanical properties for biomedical applications. In particular, to fully harness the non-contact and non-destructive nature of Brillouin imaging, there is strong motivation to develop a fibre-integrated device and extend the technology into the domain of in vivo and in situ operation, such as for medical diagnostics. This work presents the first demonstration of a fibre optic Brillouin probe that is capable of mapping the mechanical properties of a tissue-mimicking phantom. This is achieved through combination of miniaturised optical design, advanced hollow-core fibre fabrication and high-resolution 3D printing. The protype probe is compact, background-free and possesses the highest collection efficiency to date, thus provides the foundation of a fibre-based Brillouin device for remote in situ measurements in challenging and otherwise difficult-to-reach environments, for biomedical, material science and industrial applications.

physics.ins-det↗

arXiv2020

SNR Enhancement in Brillouin Microspectroscopy using Spectrum Reconstruction

Brillouin imaging suffers from intrinsically low signal-to-noise ratios (SNR). Such low SNRs can render common data analysis protocols unreliable, especially for SNRs below $\sim10$. In this work we exploit two denoising algorithms, namely maximum entropy reconstruction (MER) and wavelet analysis (WA), to improve the accuracy and precision in determination of Brillouin shifts and linewidth. Algorithm performance is quantified using Monte-Carlo simulations and benchmarked against the Cramér-Rao lower bound. Superior estimation results are demonstrated even at low SNRS ($\geq 1$). Denoising was furthermore applied to experimental Brillouin spectra of distilled water at room temperature, allowing the speed of sound in water to be extracted. Experimental and theoretical values were found to be consistent to within $\pm1\%$ at unity SNR.

eess.SP↗

arXiv2019

Precision and informational limits in inelastic optical spectroscopy

Using Fisher information and the Cramér-Rao lower bound, we analyse fundamental precision limits in the determination of spectral parameters in inelastic optical scattering. General analytic formulae are derived which account for the instrument response functions of the dispersive element and relay optics found in practical Raman and Brillouin spectrometers. Limiting cases of dispersion and diffraction limited spectrometers, corresponding to measurement of Lorentzian and Voigt lineshapes respectively, are discussed in detail allowing optimal configurations to be identified. Effects of defocus, spherical aberration, detector pixellation and a finite detector size are also considered.

physics.ins-det↗

arXiv2018

Brillouin microscopy, what is it really measuring?

Brillouin microscopy measures compressibility, but is being increasingly used to assess stiffness of cells and tissues. Using hydrogels with tunable properties, we demonstrate that Brillouin microscopy is insensitive to stiffness of hydrated materials, but depends strongly on water content, consistent with a theoretical model of biphasic compressibility. Empirical correlations between Brillouin measurements and stiffness arise due to their mutual dependence on water content, but correlations vanish once hydration is controlled.

q-bio.QM↗

arXiv2016

Integrated Plasmonic Metasurfaces for Spectropolarimetry

Plasmonic metasurfaces enable simultaneous control of the phase, momentum, amplitude and polarisation of light and hence promise great utility in realisation of compact photonic devices. In this paper, we demonstrate a novel chip-scale device suitable for simultaneous polarisation and spectral measurements through use of six integrated plasmonic metasurfaces (IPMs), which diffract light with a given polarisation state and spectral component into well-defined spatial domains. Full calibration and characterisation of our device is presented, whereby good spectral resolution and polarisation accuracy over a wavelength range of 500-700~nm is shown. Functionality of our device in a Müller matrix modality is demonstrated through determination of the polarisation properties of a commercially available variable waveplate. Our proposed IPM is robust, compact and can be fabricated with a single photolithography step, promising many applications in polarisation imaging, quantum communication and quantitative sensing.

physics.optics↗