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Peter van Heijster

Publications and source records attributed to Peter van Heijster.

At least 19 recordsLinked to original sources

Late Fusion Neural Operators for Extrapolation Across Parameter Space in Partial Differential Equations

Developing neural operators that accurately predict the behavior of systems governed by partial differential equations (PDEs) across unseen parameter regimes is crucial for robust generalization in scientific and engineering applications. In practical applications, variations in physical parameters induce distribution shifts between training and prediction regimes, making extrapolation a central challenge. As a result, the way parameters are incorporated into neural operator models plays a key role in their ability to generalize, particularly when state and parameter representations are entangled. In this work, we introduce the Late Fusion Neural Operator, an architecture that disentangles learning state dynamics from parameter effects, improving predictive performance both within and beyond the training distribution. Our approach combines neural operators for learning latent state representations with sparse regression to incorporate parameter information in a structured manner. Across four benchmark PDEs including advection, Burgers, and both 1D and 2D reaction-diffusion equations, the proposed method consistently outperforms Fourier Neural Operator and CAPE-FNO. Late Fusion Neural Operators achieve consistently the best performance in all experiments, with an average RMSE reduction of 72.9% in-domain and 71.8% out-domain compared to the second-best method. These results demonstrate strong generalization across both in-domain and out-domain parameter regimes.

cs.LG

Neural Ordinary Differential Equations for Learning and Extrapolating System Dynamics Across Bifurcations

Forecasting system behaviour near and across bifurcations is crucial for identifying potential shifts in dynamical systems. While machine learning has recently been used to learn critical transitions and bifurcation structures from data, most studies remain limited as they exclusively focus on discrete-time methods and local bifurcations. To address these limitations, we use Neural Ordinary Differential Equations which provide a data-driven framework for learning system dynamics. Our results show that Neural Ordinary Differential Equations can recover underlying bifurcation structures directly from time-series data by learning parameter-dependent vector fields. Notably, we demonstrate that Neural Ordinary Differential Equations can forecast bifurcations even beyond the parameter regions represented in the training data. We demonstrate our approach on three test cases: the Lorenz system transitioning from non-chaotic to chaotic behaviour, the Rössler system moving from chaos to period doubling, and a predator-prey model exhibiting collapse via a global bifurcation.

cs.LG

Partial Eigenvalue Assignment for Nonlinear Systems

In this paper, we study control design methods for assigning a subset of nonlinear right or left eigenvalues to a specified set of scalar-valued functions via nonlinear Sylvester equations. This framework can be viewed as a generalization of partial linear eigenvalue assignment (also referred to as partial pole placement) for linear systems. First, we propose a method for partial nonlinear right eigenvalue assignment via state feedback using a nonlinear Sylvester equation and a condition for preserving an open-loop nonlinear right eigenvalue. This method can be applied to partial stabilization of nonlinear systems. Then, as the dual problem, we present a method for partial nonlinear left eigenvalue assignment via the dual nonlinear Sylvester equation and a condition for preserving an open-loop nonlinear left eigenvalue, which can be applied to partial observer design for nonlinear system.

math.OC

Random Evolutionary Dynamics in Predator-Prey Systems Yields Large, Clustered Ecosystems

We study the effect of speciation, i.e. the introduction of new species through evolution into communities, in the setting of predator-prey systems. Predator-prey dynamics is classically well modeled by Lotka-Volterra equations, also when multiple predator and prey species co-exist. The consequences of the emergence of new species in such systems are much less well understood. We find that introducing random evolving species leads to robust ecosystems in which large numbers of species coexist. Crucially, in these large ecosystems an emergent clustering of species is observed, tying functional differences to phylogenetic history.

q-bio.PE

Blurring the Busse balloon: Patterns in a stochastic Klausmeier model

We investigate (in)stabilities of periodic patterns under stochastic forcing in reaction-diffusion equations exhibiting a so-called Busse balloon. Specifically, we used a one-dimensional Klausmeier model for dryland vegetation patterns. Using numerical methods, we can accurately describe the transient dynamics of the stochastic solutions and compare several notions of stability. In particular, we show that stochastic stability heavily depends on the model parameters, the intensity of the noise and the location of the wavenumber of the periodic pattern within the deterministic Busse balloon. Furthermore, the boundary of the Busse balloon becomes blurred under the stochastic perturbations.

math.AP

A Distributed Time-Varying Optimization Approach Based on an Event-Triggered Scheme

In this paper, we present an event-triggered distributed optimization approach including a distributed controller to solve a class of distributed time-varying optimization problems (DTOP). The proposed approach is developed within a distributed neurodynamic (DND) framework that not only optimizes the global objective function in real-time, but also ensures that the states of the agents converge to consensus. This work stands out from existing methods in two key aspects. First, the distributed controller enables the agents to communicate only at designed instants rather than continuously by an event-triggered scheme, which reduces the energy required for agent communication. Second, by incorporating an integral mode technique, the event-triggered distributed controller avoids computing the inverse of the Hessian of each local objective function, thereby reducing computational costs. Finally, an example of battery charging problem is provided to demonstrate the effectiveness of the proposed event-triggered distributed optimization approach.

math.OC

Deformations of acid-mediated invasive tumors in a model with Allee effect

We consider a Gatenby--Gawlinski-type model of invasive tumors in the presence of an Allee effect. We describe the construction of bistable one-dimensional traveling fronts using singular perturbation techniques in different parameter regimes corresponding to tumor interfaces with, or without, acellular gap. By extending the front as a planar interface, we perform a stability analysis to long wavelength perturbations transverse to the direction of front propagation and derive a simple stability criterion for the front in two spatial dimensions. In particular we find that in general the presence of the acellular gap indicates transversal instability of the associated planar front, which can lead to complex interfacial dynamics such as the development of finger-like protrusions and/or different invasion speeds.

math.AP

Chaotic motion and singularity structures of front solutions in multi-component FitzHugh-Nagumo-type systems

We study the dynamics of front solutions in a certain class of multi-component reaction-diffusion systems, where one fast component governed by an Allen-Cahn equation is weakly coupled to a system of $N$ linear slow reaction-diffusion equations. By using geometric singular perturbation theory, Evans function analysis and center manifold reduction, we demonstrate that and how the complexity of the front motion can be controlled by the choice of coupling function and the dimension $N$ of the slow part of the multi-component reaction-diffusion system. On the one hand, we show how to imprint and unfold a given scalar singularity structure. On the other hand, for $N\geq 3$ we show how chaotic behaviour of the front speed arises from the unfolding of a nilpotent singularity via the breaking of a Shil'nikov homoclinic orbit. The rigorous analysis is complemented by a numerical study that is heavily guided by our analytic findings.

math.AP

Analysing transitions from a Turing instability to large periodic patterns in a reaction-diffusion system

Analytically tracking patterns emerging from a small amplitude Turing instability to large amplitude remains a challenge as no general theory exists. In this paper, we consider a three component reaction-diffusion system with one of its components singularly perturbed, this component is known as the fast variable. We develop an analytical theory describing the periodic patterns emerging from a Turing instability using geometric singular perturbation theory. We show analytically that after the initial Turing instability, spatially periodic patterns evolve into a small amplitude spike in the fast variable whose amplitude grows as one moves away from onset. This is followed by a secondary transition where the spike in the fast variable widens, its periodic pattern develops two sharp transitions between two flat states and the amplitudes of the other variables grow. The final type of transition we uncover analytically is where the flat states of the fast variable develop structure in the periodic pattern. The analysis is illustrated and motivated by a numerical investigation. We conclude with a preliminary numerical investigation where we uncover more complicated periodic patterns and snaking-like behaviour that are driven by the three transitions analysed in this paper. This paper provides a crucial step towards understanding how periodic patterns transition from a Turing instability to large amplitude.

math.DS

Waves in a Stochastic Cell Motility Model

In Bhattacharya et al. (Science Advances, 2020), a set of chemical reactions involved in the dynamics of actin waves in cells was studied. Both at the microscopic level, where the individual chemical reactions are directly modelled using Gillespie-type algorithms, and on a macroscopic level where a deterministic reaction-diffusion equation arises as the large-scale limit of the underlying chemical reactions. In this work, we derive, and subsequently study, the related mesoscopic stochastic reaction-diffusion system, or Chemical Langevin Equation, that arises from the same set of chemical reactions. We explain how the stochastic patterns that arise from this equation can be used to understand the experimentally observed dynamics from Bhattacharya et al. In particular, we argue that the mesoscopic stochastic model better captures the microscopic behaviour than the deterministic reaction-diffusion equation, while being more amenable for mathematical analysis and numerical simulations than the microscopic model.

math.AP

Stability analysis of a modified Leslie-Gower predation model with weak Allee effect on the prey

In this manuscript, we study a Leslie-Gower predator-prey model with a hyperbolic functional response and weak Allee effect. The results reveal that the model supports coexistence and oscillation of both predator and prey populations. We also identify regions in the parameter space in which different kinds of bifurcations, such as saddle-node bifurcations, Hopf bifurcations and Bogdanov-Takens bifurcations.

math.DS

Extinction of bistable populations is affected by the shape of their initial spatial distribution

The question of whether biological populations survive or are eventually driven to extinction has long been examined using mathematical models. In this work we study population survival or extinction using a stochastic, discrete lattice-based random walk model where individuals undergo movement, birth and death events. The discrete model is defined on a two-dimensional hexagonal lattice with periodic boundary conditions. A key feature of the discrete model is that crowding effects are introduced by specifying two different crowding functions that govern how local agent density influences movement events and birth/death events. The continuum limit description of the discrete model is a nonlinear reaction-diffusion equation, and we focus on crowding functions that lead to linear diffusion and a bistable source term that is often associated with the strong Allee effect. Using both the discrete and continuum modelling tools we explore the complicated relationship between the long-term survival or extinction of the population and the initial spatial arrangement of the population. In particular, we study different spatial arrangements of initial distributions: (i) a well-mixed initial distribution where the initial density is independent of position in the domain; (ii) a vertical strip initial distribution where the initial density is independent of vertical position in the domain; and, (iii) several forms of two-dimensional initial distributions where the initial population is distributed in regions with different shapes. Our results indicate that the shape of the initial spatial distribution of the population affects extinction of bistable populations. All software required to solve the discrete and continuum models used in this work are available on GitHub.

q-bio.PE

Shock-fronted travelling waves in a reaction-diffusion model with nonlinear forward-backward-forward diffusion

Reaction-diffusion equations (RDEs) are often derived as continuum limits of lattice-based discrete models. Recently, a discrete model which allows the rates of movement, proliferation and death to depend upon whether the agents are isolated has been proposed, and this approach gives various RDEs where the diffusion term is convex and can become negative (Johnston et al., Sci. Rep. 7, 2017), i.e. forward-backward-forward diffusion. Numerical simulations suggest these RDEs support shock-fronted travelling waves when the reaction term includes an Allee effect. In this work we formalise these preliminary numerical observations by analysing the shock-fronted travelling waves through embedding the RDE into a larger class of higher order partial differential equations (PDEs). Subsequently, we use geometric singular perturbation theory to study this larger class of equations and prove the existence of these shock-fronted travelling waves. Most notable, we show that different embeddings yield shock-fronted travelling waves with different properties.

math.DS

Bifurcation analysis of a prey-predator model with predator intra-specific interactions and ratio-dependent functional response

We study the Bazykin predator-prey model with predator intraspecific interactions and ratio-dependent functional response and show the existence and stability of two interior equilibrium points. We prove that the model displays a wide range of different bifurcations, such as saddle-node bifurcations, Hopf bifurcations, homoclinic bifurcations and Bogdanov-Takens bifurcations. We use numerical simulations to further illustrate the impact changing the predator per capita consumption rate has on the basin of attraction of the stable equilibrium points, as well as the impact of changing the efficiency with which predators convert consumed prey into new predators.

math.DS

Traveling pulse solutions in a three-component FitzHugh-Nagumo Model

We use geometric singular perturbation techniques combined with an action functional approach to study traveling pulse solutions in a three-component FitzHugh--Nagumo model. First, we derive the profile of traveling $1$-pulse solutions with undetermined width and propagating speed. Next, we compute the associated action functional for this profile from which we derive the conditions for existence and a saddle-node bifurcation as the zeros of the action functional and its derivatives. We obtain the same conditions by using a different analytical approach that exploits the singular limit of the problem. We also apply this methodology of the action functional to the problem for traveling $2$-pulse solutions and derive the explicit conditions for existence and a saddle-node bifurcation. From these we deduce a necessary condition for the existence of traveling $2$-pulse solutions. We end this article with a discussion related to Hopf bifurcations near the saddle-node bifurcation.

nlin.PS

Travelling wave solutions in a negative nonlinear diffusion-reaction model

We use a geometric approach to prove the existence of smooth travelling wave solutions of a nonlinear diffusion-reaction equation with logistic kinetics and a convex nonlinear diffusivity function which changes sign twice in our domain of interest. We determine the minimum wave speed, c*, and investigate its relation to the spectral stability of the travelling wave solutions.

math.AP

A modified May-Holling-Tanner predator-prey model with multiple Allee effects on the prey and an alternative food source for the predator

We study a predator-prey model with Holling type I functional response, an alternative food source for the predator, and multiple Allee effects on the prey. We show that the model has at most two equilibrium points in the first quadrant, one is always a saddle point while the other can be a repeller or an attractor. Moreover, there is always a stable equilibrium point that corresponds to the persistence of the predator population and the extinction of the prey population. Additionally, we show that when the parameters are varied the model displays a wide range of different bifurcations, such as saddle-node bifurcations, Hopf bifurcations, Bogadonov-Takens bifurcations and homoclinic bifurcations. We use numerical simulations to illustrate the impact changing the predation rate, or the non-fertile prey population, and the proportion of alternative food source have on the basins of attraction of the stable equilibrium point in the first quadrant (when it exists). In particular, we also show that the basin of attraction of the stable positive equilibrium point in the first quadrant is bigger when we reduce the depensation in the model.

math.DS

Turing patterns in a diffusive Holling-Tanner predator-prey model with an alternative food source for the predator

In this manuscript, we consider temporal and spatio-temporal modified Holling-Tanner predator-prey models with predator-prey growth rate as a logistic type, Holling type II functional response and alternative food sources for the predator. From our result of the temporal model, we identify regions in parameter space in which Turing instability in the spatio-temporal model is expected and we show numerical evidence where the Turing instability leads to spatio-temporal periodic solutions. Subsequently, we analyse these instabilities. We use simulations to illustrate the behaviour of both the temporal and spatio-temporal model.

math.DS