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Philip Greengard

Publications and source records attributed to Philip Greengard.

21 records · Page 2Linked to original sources

Fast methods for posterior inference of two-group normal-normal models

We describe a class of algorithms for evaluating posterior moments of certain Bayesian linear regression models with a normal likelihood and a normal prior on the regression coefficients. The proposed methods can be used for hierarchical mixed effects models with partial pooling over one group of predictors, as well as random effects models with partial pooling over two groups of predictors. We demonstrate the performance of the methods on two applications, one involving U.S. opinion polls and one involving the modeling of COVID-19 outbreaks in Israel using survey data. The algorithms involve analytical marginalization of regression coefficients followed by numerical integration of the remaining low-dimensional density. The dominant cost of the algorithms is an eigendecomposition computed once for each value of the outside parameter of integration. Our approach drastically reduces run times compared to state-of-the-art Markov chain Monte Carlo (MCMC) algorithms. The latter, in addition to being computationally expensive, can also be difficult to tune when applied to hierarchical models.

stat.CO↗

A Fast Linear Regression via SVD and Marginalization

We describe a numerical scheme for evaluating the posterior moments of Bayesian linear regression models with partial pooling of the coefficients. The principal analytical tool of the evaluation is a change of basis from coefficient space to the space of singular vectors of the matrix of predictors. After this change of basis and an analytical integration, we reduce the problem of finding moments of a density over k + m dimensions, to finding moments of an m-dimensional density, where k is the number of coefficients and k + m is the dimension of the posterior. Moments can then be computed using, for example, MCMC, the trapezoid rule, or adaptive Gaussian quadrature. An evaluation of the SVD of the matrix of predictors is the dominant computational cost and is performed once during the precomputation stage. We demonstrate numerical results of the algorithm. The scheme described in this paper generalizes naturally to multilevel and multi-group hierarchical regression models where normal-normal parameters appear.

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Zernike Polynomials: Evaluation, Quadrature, and Interpolation

Zernike polynomials are a basis of orthogonal polynomials on the unit disk that are a natural basis for representing smooth functions. They arise in a number of applications including optics and atmospheric sciences. In this paper, we provide a self-contained reference on Zernike polynomials, algorithms for evaluating them, and what appear to be new numerical schemes for quadrature and interpolation. We also introduce new properties of Zernike polynomials in higher dimensions. The quadrature rule and interpolation scheme use a tensor product of equispaced nodes in the angular direction and roots of certain Jacobi polynomials in the radial direction. An algorithm for finding the roots of these Jacobi polynomials is also described. The performance of the interpolation and quadrature schemes is illustrated through numerical experiments. Discussions of higher dimensional Zernike polynomials are included in appendices.

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