arXiv subjects

Pujun Zheng

Publications and source records attributed to Pujun Zheng.

5 recordsLinked to original sources

arXiv2026

SWE-Bench Pro Verified: A Reliable Benchmark for Software Engineering Agents

SWE-Bench Pro has emerged as a standard benchmark for evaluating software engineering agents on challenging repository-level tasks. However, our analysis work show that its evaluation is undermined by two sources of unreliability: \textbf{reward hacking}, enabled by leakage of gold solutions or hidden evaluation information, and \textbf{task quality issues}, including misleading problem statements and improperly scoped tests. These issues can inflate benchmark performance and obscure agents' true coding ability. We present \textbf{SWE-Bench Pro Verified}, a verified version of SWE-Bench Pro that addresses both problems. Our approach combines \textbf{anti-hacking} safeguards that eliminate major leakage channels without disrupting normal agent functionality, with \textbf{task refinement} that minimally corrects inconsistencies within flawed instances. Evaluations on SWE-Bench Pro Verified reveal that some models perform substantially worse than previously reported, suggesting that existing results on SWE-Bench Pro may overestimate real software engineering capability. SWE-Bench Pro Verified offers a more trustworthy benchmark for assessing software engineering agents.

cs.AI↗

arXiv2026

GraphReview: Scientific Paper Evaluation via LLM-based Graph Evidence Expansion

Scientific paper evaluation often involves not only assessing a manuscript itself, but also relating it to contemporaneous research and prior literature. However, existing LLM-based methods typically model these signals separately and lack a unified mechanism for aggregating review evidence across papers. We propose $\textbf{GraphReview}$, a graph-based LLM framework that formulates paper evaluation as inference-time graph evidence expansion over a semantic paper graph. The graph jointly captures intrinsic quality, synchronic links among contemporaneous papers, and diachronic links to prior work. LLMs are used to estimate node-level quality priors and generate edge-level comparative evidence through pairwise paper comparisons, while Personalized PageRank integrates these structured signals for quality ranking, decision prediction, and review generation. To produce higher-quality graph evidence, we propose reward-induced maximum likelihood objectives for training the LLM backbones. Experiments show that GraphReview consistently outperforms the strongest baseline, achieving average improvements of 29.7% on decision and ranking metrics, including gains of 23.7% in Accuracy and 57.6% in Spearman's $\rho$. It also produces higher-quality review texts and generalizes effectively across time periods and conference venues.

cs.CL↗

arXiv2026

Mitigating Selection Bias in Large Language Models via Permutation-Aware GRPO

Large language models (LLMs) used for multiple-choice and pairwise evaluation tasks often exhibit selection bias due to non-semantic factors like option positions and label symbols. Existing inference-time debiasing is costly and may harm reasoning, while pointwise training ignores that the same question should yield consistent answers across permutations. To address this issue, we propose Permutation-Aware Group Relative Policy Optimization (PA-GRPO), which mitigates selection bias by enforcing permutation-consistent semantic reasoning. PA-GRPO constructs a permutation group for each instance by generating multiple candidate permutations, and optimizes the model using two complementary mechanisms: (1) cross-permutation advantage, which computes advantages relative to the mean reward over all permutations of the same instance, and (2) consistency-aware reward, which encourages the model to produce consistent decisions across different permutations. Experimental results demonstrate that PA-GRPO outperforms strong baselines across seven benchmarks, substantially reducing selection bias while maintaining high overall performance. The code is available on github (https://github.com/ECNU-Text-Computing/PA-GRPO).

cs.CL↗

arXiv2026

MoRI: Learning Motivation-Grounded Reasoning for Scientific Ideation in Large Language Models

Scientific ideation aims to propose novel solutions within a given scientific context. Existing LLM-based agentic approaches emulate human research workflows, yet inadequately model scientific reasoning, resulting in surface-level conceptual recombinations that lack technical depth and scientific grounding. To address this issue, we propose \textbf{MoRI} (\textbf{Mo}tivation-grounded \textbf{R}easoning for Scientific \textbf{I}deation), a framework that enables LLMs to explicitly learn the reasoning process from research motivations to methodologies. The base LLM is initialized via supervised fine-tuning to generate a research motivation from a given context, and is subsequently trained under a composite reinforcement learning reward that approximates scientific rigor: (1) entropy-aware information gain encourages the model to uncover and elaborate high-complexity technical details grounded in ground-truth methodologies, and (2) contrastive semantic gain constrains the reasoning trajectory to remain conceptually aligned with scientifically valid solutions. Empirical results show that MoRI consistently outperforms strong commercial LLMs and complex agentic baselines across multiple dimensions, including novelty, technical rigor, and feasibility. The code is available on \href{https://github.com/ECNU-Text-Computing/IdeaGeneration}{GitHub}.

cs.CL↗

arXiv2026

From Isolated Scoring to Collaborative Ranking: A Comparison-Native Framework for LLM-Based Paper Evaluation

Large language models (LLMs) are currently applied to scientific paper evaluation by assigning an absolute score to each paper independently. However, since score scales vary across conferences, time periods, and evaluation criteria, models trained on absolute scores are prone to fitting narrow, context-specific rules rather than developing robust scholarly judgment. To overcome this limitation, we propose shifting paper evaluation from isolated scoring to collaborative ranking. In particular, we design a $\textbf{C}$omparison-$\textbf{N}$ative framework for $\textbf{P}$aper $\textbf{E}$valuation ($\textbf{CNPE}$), integrating comparison into both data construction and model learning. We first propose a graph-based similarity ranking algorithm to facilitate the sampling of more informative and discriminative paper pairs from a collection. We then enhance relative quality judgment through supervised fine-tuning and reinforcement learning with comparison-based rewards. At inference, the model performs pairwise comparisons over sampled paper pairs and aggregates these preference signals into a global relative quality ranking. Experimental results demonstrate that our framework achieves an average relative improvement of 21.8% over the strong baseline DeepReview-14B, while exhibiting robust generalization to five previously unseen datasets. Our code is available at https://github.com/ECNU-Text-Computing/ComparisonReview.

cs.IR↗