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Qinlin Gu

Publications and source records attributed to Qinlin Gu.

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vPET-ABC: Fast Voxelwise Approximate Bayesian Inference for Kinetic Modeling in PET

Dynamic PET kinetic modeling increasingly demands voxelwise uncertainty quantification and robust model selection. Yet total-body PET (TB-PET) data volumes make conventional Bayesian approaches, such as per-voxel MCMC, computationally impractical, while deep models typically require retraining and careful revalidation when tracers, protocols, or kinetic models change, without necessarily improving inference speed. Vectorized voxelwise approximate Bayesian computation (vPET-ABC) is introduced as a likelihood-free, model-agnostic posterior inference framework for dynamic PET kinetic modeling at total-body scale. The method replaces explicit likelihood evaluation with forward simulations and a discrepancy test, then exploits full vectorization to transform voxelwise inference into an embarrassingly parallel workload suited to modern GPUs. In simulation, vPET-ABC produced posterior summaries with small divergence from sequential Monte Carlo baselines, and posterior mean estimates significantly more accurate than non-negative least squares (NNLS). For model selection between the linear parametric neurotransmitter model (lp-ntPET) and the multilinear reference tissue model, vPET-ABC maintained high sensitivity under high noise with moderate loss of specificity, whereas NNLS+Bayesian information criteria exhibited the opposite trade-off with near-zero sensitivity. In a human cigarette smoking dataset, vPET-ABC yielded denser probabilistic activation maps than lp-ntPET with effective number of parameters. On a 50 min total-body [18F]FDG study, vPET-ABC generated high quality whole volume K_i parametric images within practical runtimes on a single GPU, while also preserved local spatial correlation better than NNLS. Overall, vPET-ABC delivers fast, training-free, uncertainty-aware inference that scales to TB-PET and remains portable across tracers and kinetic models.

stat.AP

Generative Consistency Models for Estimation of Kinetic Parametric Image Posteriors in Total-Body PET

Dynamic total body positron emission tomography (TB-PET) makes it feasible to measure the kinetics of all organs in the body simultaneously which may lead to important applications in multi-organ disease and systems physiology. Since whole-body kinetics are highly heterogeneous with variable signal-to-noise ratios, parametric images should ideally comprise not only point estimates but also measures of posterior statistical uncertainty. However, standard Bayesian techniques, such as Markov chain Monte Carlo (MCMC), are computationally prohibitive at the total body scale. We introduce a generative consistency model (CM) that generates samples from the posterior distributions of the kinetic model parameters given measured time-activity curves and arterial input function. CM is able to collapse the hundreds of iterations required by standard diffusion models into just 3 denoising steps. When trained on 500,000 physiologically realistic two-tissue compartment model simulations, the CM produces similar accuracy to MCMC (median absolute percent error < 5%; median K-L divergence < 0.5) but is more than five orders of magnitude faster. CM produces more reliable Ki images than the Patlak method by avoiding the assumption of irreversibility, while also offering valuable information on statistical uncertainty of parameter estimates and the underlying model. The proposed framework removes the computational barrier to routine, fully Bayesian parametric imaging in TB-PET and is readily extensible to other tracers and compartment models.

physics.med-ph