arXiv subjects

Qiong Luo

Publications and source records attributed to Qiong Luo.

At least 19 recordsLinked to original sources

arXiv2026

REChart: Reasoning-Efficient Chart Editing with Large Reasoning Models

Chart editing requires inferring and modifying visualization code from a reference chart image based on an editing instruction, challenging fine-grained visual reasoning, instruction following, and executable code synthesis capabilities of MLLMs. Large reasoning models (LRMs) with extended Chain-of-Thought (CoT) reasoning are suitable for tackling such complex multimodal tasks. However, our preliminary study reveals an ``inverted-U'' relationship between reasoning length and chart-editing performance: Excessive reasoning often leads to ``overthinking,'' where models drift toward hallucinated visual details or get stuck in redundant reasoning loops. To address the gap, we introduce REChart, a two-stage training framework that provides process-level supervision over intermediate reasoning steps, improving both editing fidelity and reasoning efficiency. First, we synthesize 200k high-quality reasoning trajectories for supervised fine-tuning from a large image-instruction-code pool, using a role-specialized agentic Reason-Score-Refine workflow that iteratively refine the chart code toward higher quality. Second, we optimize the model via reinforcement learning with two complementary rewards: a \emph{fidelity} reward evaluating code correctness, visual fidelity, and structural consistency, and an \emph{efficiency} reward that assigns each rollout a random thinking budget, truncates the reasoning process, and credits the final reasoning segment according to its contribution to the output. On the ChartEdit and ChartMIMIC benchmarks, our model achieves state-of-the-art chart-editing performance among open-source models of comparable scale, while mitigating overthinking and reducing average reasoning token usage by 79.0\% under a maximum thinking budget of 16,384 tokens compared with the base model.

cs.CV↗

arXiv2026

Estimating Uncertainty in Galaxy Morphology Classification

Astronomers classify galaxy morphology to investigate cosmic evolution. While deep foundation models are increasingly utilized in Galaxy Morphology Classification (GMC), little work has been done on evaluating the uncertainty of GMC results. Uncertainty evaluation is important because astronomical data are inherently noisy due to instrumental and environmental limitations. Also, the continuous evolution of galaxies creates intrinsic morphological ambiguity. However, current foundation models operate as deterministic point estimators, failing to quantify the uncertainty. To overcome this limitation, we propose UEGMC, a post-hoc framework of Uncertainty Estimation for Galaxy Morphology Classification. It categorizes uncertainty in GMC into distinct types by model parameters, astronomical data, reference standards, or intrinsic physical ambiguities, thereby facilitating better classification. Our framework can directly predict uncertainties from representations extracted from the frozen backbones of foundation models, without computationally expensive sampling, therefore enabling fine-grained uncertainty evaluations. Our experimental results demonstrate that UEGMC provides competitive uncertainty quantification performance compared with previous methods.

cs.AI↗

arXiv2026

Cross-Modal Clinical Knowledge Integration for Mammography Report Generation

Breast cancer is a major global health concern, and mammography screening plays a central role in early detection. The large volume of screening examinations creates a substantial workload for radiologists, making accurate and consistent report generation a critical clinical challenge. Existing automated mammography report generation methods primarily focus on direct visual-to-text mapping, while overlooking the structured clinical reasoning process followed by radiologists in real-world practice. To address this limitation, we propose MammoRG, a mammography report generation framework that explicitly simulates the clinical reporting workflow by following the BI-RADS guideline and incorporating prior clinical knowledge to produce diagnostic reports. Specifically, MammoRG adopts a two-stage training framework. In the first stage, the model learns to integrate clinically relevant prior knowledge from a patient's four-view mammograms through classification-based supervision. In the second stage, a terminology-aware supervised fine-tuning strategy is introduced to model mammography-specific clinical terms as atomic semantic units, enabling the generation of high-quality reports with improved clinical consistency. To facilitate clinical efficacy evaluation of generated reports, we further develop MammoRGTool, a dedicated mammography report parsing tool that extracts structured clinical information from free-text reports. Extensive experiments demonstrate that MammoRG consistently outperforms existing methods across multiple clinical efficacy metrics, particularly in diagnosis-related BI-RADS F1, where it surpasses the second-best model by 2.73%, 2.04%, 1.90%, and 3.27% on the internal, external 1, external 2, and VinDr-Mammo datasets, respectively.

cs.CV↗

arXiv2026

Improving Radio Interferometry Imaging by Explicitly Modeling Cross-Domain Consistency in Reconstruction

Radio astronomy plays a crucial role in understanding the universe, particularly within the realm of non-thermal astrophysics. Images of celestial objects are derived from the signals (called visibility) measured by radio telescopes. Such imaging results, called dirty images, contain artifacts due to factors such as sparsity and therefore require reconstruction to improve imaging quality. Existing methods typically restrict reconstruction to a unimodal domain, either to the dirty image after imaging or to the sparse visibility prior to imaging. Focusing solely on each unimodal reconstruction results in the loss of complementary in-context information in either the visibility or image domain, leading to an incomplete modeling of mutual dependency and consistency. To address these challenges, we propose CDCRec, a multimodal radio interferometric data reconstruction method that explicitly models cross-domain consistency. We design a hierarchical multi-task and multi-stage framework to enhance the exploration of interplays between domains during reconstruction. Our experimental results demonstrate that CDCRec improves imaging performance through enhanced cross-domain correlation extraction. In particular, our self-supervised complementary modeling strategy is better than current methods at interferometric domain translations that rely heavily on recovering dense information from constrained source-domain data.

cs.CV↗

arXiv2026

VVTRec: Radio Interferometric Reconstruction through Visual and Textual Modality Enrichment

Radio astronomy is an indispensable discipline for observing distant celestial objects. Measurements of wave signals from radio telescopes, called visibility, need to be transformed into images for astronomical observations. These dirty images blend information from real sources and artifacts. Therefore, astronomers usually perform reconstruction before imaging to obtain cleaner images. Existing methods consider only a single modality of sparse visibility data, resulting in images with remaining artifacts and insufficient modeling of correlation. To enhance the extraction of visibility information and emphasize output quality in the image domain, we propose VVTRec, a multimodal radio interferometric data reconstruction method with visibility-guided visual and textual modality enrichment. In our VVTRec, sparse visibility is transformed into image-form and text-form features to obtain enhancements in terms of spatial and semantic information, improving the structural integrity and accuracy of images. Also, we leverage Vision-Language Models (VLMs) to achieve additional training-free performance improvements. VVTRec enables sparse visibility, as a foreign modality unseen by VLMs, to accurately extract pre-trained knowledge as a supplement. Our experiments demonstrate that VVTRec effectively enhances imaging results by exploiting multimodal information without introducing excessive computational overhead.

cs.CV↗

arXiv2025

D-GAP: Improving Out-of-Domain Robustness via Dataset-Agnostic and Gradient-Guided Augmentation in Frequency and Pixel Spaces

Out-of-domain (OOD) robustness is challenging to achieve in real-world computer vision applications, where shifts in image background, style, and acquisition instruments always degrade model performance. Generic augmentations show inconsistent gains under such shifts, whereas dataset-specific augmentations require expert knowledge and prior analysis. Moreover, prior studies show that neural networks adapt poorly to domain shifts because they exhibit a learning bias to domain-specific frequency components. Perturbing frequency values can mitigate such bias but overlooks pixel-level details, leading to suboptimal performance. To address these problems, we propose D-GAP, a Dataset-agnostic and Gradient-guided augmentation method for the Amplitude spectrum (in frequency space) and the Pixel values, improving OOD robustness by introducing targeted augmentation in both frequency and pixel spaces. Unlike conventional handcrafted augmentations, D-GAP computes sensitivity maps in the frequency space from task gradients, which reflect how strongly the deep models respond to different frequency components, and uses the maps to adaptively interpolate amplitudes between source and target samples. This way, D-GAP reduces the learning bias in frequency space, while a complementary pixel-space blending procedure restores fine spatial details. Extensive experiments on four real-world datasets and three domain-adaptation benchmarks show that D-GAP consistently outperforms both generic and dataset-specific domain adaptation methods, improving average OOD performance by +5.3% on real-world datasets and +1.9% on benchmark datasets.

cs.CV↗

arXiv2025

A Versatile Foundation Model for AI-enabled Mammogram Interpretation

Breast cancer is the most commonly diagnosed cancer and the leading cause of cancer-related mortality in women globally. Mammography is essential for the early detection and diagnosis of breast lesions. Despite recent progress in foundation models (FMs) for mammogram analysis, their clinical translation remains constrained by several fundamental limitations, including insufficient diversity in training data, limited model generalizability, and a lack of comprehensive evaluation across clinically relevant tasks. Here, we introduce VersaMammo, a versatile foundation model for mammograms, designed to overcome these limitations. We curated the largest multi-institutional mammogram dataset to date, comprising 706,239 images from 21 sources. To improve generalization, we propose a two-stage pre-training strategy to develop VersaMammo, a mammogram foundation model. First, a teacher model is trained via self-supervised learning to extract transferable features from unlabeled mammograms. Then, supervised learning combined with knowledge distillation transfers both features and clinical knowledge into VersaMammo. To ensure a comprehensive evaluation, we established a benchmark comprising 92 specific tasks, including 68 internal tasks and 24 external validation tasks, spanning 5 major clinical task categories: lesion detection, segmentation, classification, image retrieval, and visual question answering. VersaMammo achieves state-of-the-art performance, ranking first in 50 out of 68 specific internal tasks and 20 out of 24 external validation tasks, with average ranks of 1.5 and 1.2, respectively. These results demonstrate its superior generalization and clinical utility, offering a substantial advancement toward reliable and scalable breast cancer screening and diagnosis.

cs.CV↗

arXiv2025

GalaxAlign: Mimicking Citizen Scientists' Multimodal Guidance for Galaxy Morphology Analysis

Galaxy morphology analysis involves studying galaxies based on their shapes and structures. For such studies, fundamental tasks include identifying and classifying galaxies in astronomical images, as well as retrieving visually or structurally similar galaxies through similarity search. Existing methods either directly train domain-specific foundation models on large, annotated datasets or fine-tune vision foundation models on a smaller set of images. The former is effective but costly, while the latter is more resource-efficient but often yields lower accuracy. To address these challenges, we introduce GalaxAlign, a multimodal approach inspired by how citizen scientists identify galaxies in astronomical images by following textual descriptions and matching schematic symbols. Specifically, GalaxAlign employs a tri-modal alignment framework to align three types of data during fine-tuning: (1) schematic symbols representing galaxy shapes and structures, (2) textual labels for these symbols, and (3) galaxy images. By incorporating multimodal instructions, GalaxAlign eliminates the need for expensive pretraining and enhances the effectiveness of fine-tuning. Experiments on galaxy classification and similarity search demonstrate that our method effectively fine-tunes general pre-trained models for astronomical tasks by incorporating domain-specific multi-modal knowledge. Code is available at https://github.com/RapidsAtHKUST/GalaxAlign.

cs.CV↗

arXiv2025

Chart-CoCa: Self-Improving Chart Understanding of Vision LMs via Code-Driven Synthesis and Candidate-Conditioned Answering

Vision Language Models (VLMs) often struggle with chart understanding tasks, particularly in accurate chart description and complex reasoning. Synthetic data generation is a promising solution, while usually facing the challenge of noise labels. To address this challenge, we first introduce a chart synthesis pipeline that generates aligned chart-question-answer triplets through code generation and execution, ensuring the reliability of synthetic data without human intervention. Furthermore, inspired by test-time scaling that increases inference budget and thereby improves performance, we design a candidate-conditioned answering process. The VLM first generates multiple responses per query, and then synthesizes the final answer by contextualizing these candidates. Experiments demonstrate significant improvements, with up to 15.50 points accuracy gain over the initial VLM, in a fully self-improving paradigm without either human-labeled data or external models.

cs.AI↗

arXiv2025

DiGA3D: Coarse-to-Fine Diffusional Propagation of Geometry and Appearance for Versatile 3D Inpainting

Developing a unified pipeline that enables users to remove, re-texture, or replace objects in a versatile manner is crucial for text-guided 3D inpainting. However, there are still challenges in performing multiple 3D inpainting tasks within a unified framework: 1) Single reference inpainting methods lack robustness when dealing with views that are far from the reference view. 2) Appearance inconsistency arises when independently inpainting multi-view images with 2D diffusion priors; 3) Geometry inconsistency limits performance when there are significant geometric changes in the inpainting regions. To tackle these challenges, we introduce DiGA3D, a novel and versatile 3D inpainting pipeline that leverages diffusion models to propagate consistent appearance and geometry in a coarse-to-fine manner. First, DiGA3D develops a robust strategy for selecting multiple reference views to reduce errors during propagation. Next, DiGA3D designs an Attention Feature Propagation (AFP) mechanism that propagates attention features from the selected reference views to other views via diffusion models to maintain appearance consistency. Furthermore, DiGA3D introduces a Texture-Geometry Score Distillation Sampling (TG-SDS) loss to further improve the geometric consistency of inpainted 3D scenes. Extensive experiments on multiple 3D inpainting tasks demonstrate the effectiveness of our method. The project page is available at https://rorisis.github.io/DiGA3D/.

cs.CV↗

arXiv2025

Fluctuations in DNA Packing Density Drive the Spatial Segregation between Euchromatin and Heterochromatin

In the crowded eukaryotic nucleus, euchromatin and heterochromatin segregate into distinct compartments, a phenomenon often attributed to homotypic interactions mediated by liquid liquid phase separation of chromatin associated proteins. Here, we revisit genome compartmentalization by examining the role of in vivo DNA packing density fluctuations driven by ATP dependent chromatin remodelers. Leveraging DNA accessibility data, we develop a polymer based model that captures these fluctuations and successfully reproduces genome wide compartment patterns observed in HiC data, without invoking homotypic interactions. Further analysis reveals that density fluctuations in a crowded nuclear environment elevate the system energy, while euchromatin heterochromatin segregation facilitates energy dissipation, offering a thermodynamic advantage for spontaneous compartment formation. These findings suggest that euchromatin heterochromatin segregation may arise through a non equilibrium, self organizing process, providing new insights into genome organization.

cond-mat.soft↗

arXiv2025

Improving Out-of-Domain Robustness with Targeted Augmentation in Frequency and Pixel Spaces

Out-of-domain (OOD) robustness under domain adaptation settings, where labeled source data and unlabeled target data come from different distributions, is a key challenge in real-world applications. A common approach to improving OOD robustness is through data augmentations. However, in real-world scenarios, models trained with generic augmentations can only improve marginally when generalized under distribution shifts toward unlabeled target domains. While dataset-specific targeted augmentations can address this issue, they typically require expert knowledge and extensive prior data analysis to identify the nature of the datasets and domain shift. To address these challenges, we propose Frequency-Pixel Connect, a domain-adaptation framework that enhances OOD robustness by introducing a targeted augmentation in both the frequency space and pixel space. Specifically, we mix the amplitude spectrum and pixel content of a source image and a target image to generate augmented samples that introduce domain diversity while preserving the semantic structure of the source image. Unlike previous targeted augmentation methods that are both dataset-specific and limited to the pixel space, Frequency-Pixel Connect is dataset-agnostic, enabling broader and more flexible applicability beyond natural image datasets. We further analyze the effectiveness of Frequency-Pixel Connect by evaluating the performance of our method connecting same-class cross-domain samples while separating different-class examples. We demonstrate that Frequency-Pixel Connect significantly improves cross-domain connectivity and outperforms previous generic methods on four diverse real-world benchmarks across vision, medical, audio, and astronomical domains, and it also outperforms other dataset-specific targeted augmentation methods.

cs.CV↗

arXiv2025

JRE-L: Journalist, Reader, and Editor LLMs in the Loop for Science Journalism for the General Audience

Science journalism reports current scientific discoveries to non-specialists, aiming to enable public comprehension of the state of the art. This task is challenging as the audience often lacks specific knowledge about the presented research. We propose a JRE-L framework that integrates three LLMs mimicking the writing-reading-feedback-revision loop. In JRE-L, one LLM acts as the journalist, another LLM as the general public reader, and the third LLM as an editor. The journalist's writing is iteratively refined by feedback from the reader and suggestions from the editor. Our experiments demonstrate that by leveraging the collaboration of two 7B and one 1.8B open-source LLMs, we can generate articles that are more accessible than those generated by existing methods, including prompting single advanced models such as GPT-4 and other LLM-collaboration strategies. Our code is publicly available at github.com/Zzoay/JRE-L.

cs.CL↗

arXiv2024

LLM-Collaboration on Automatic Science Journalism for the General Audience

Science journalism reports current scientific discoveries to non-specialists, aiming to enable public comprehension of the state of the art. However, this task can be challenging as the audience often lacks specific knowledge about the presented research. To address this challenge, we propose a framework that integrates three LLMs mimicking the real-world writing-reading-feedback-revision workflow, with one LLM acting as the journalist, a smaller LLM as the general public reader, and the third LLM as an editor. The journalist's writing is iteratively refined by feedback from the reader and suggestions from the editor. Our experiments demonstrate that by leveraging the collaboration of two 7B and one 1.8B open-source LLMs, we can generate articles that are more accessible than those generated by existing methods, including advanced models such as GPT-4.

cs.CL↗

arXiv2024

VisRec: A Semi-Supervised Approach to Radio Interferometric Data Reconstruction

Radio telescopes produce visibility data about celestial objects, but these data are sparse and noisy. As a result, images created on raw visibility data are of low quality. Recent studies have used deep learning models to reconstruct visibility data to get cleaner images. However, these methods rely on a substantial amount of labeled training data, which requires significant labeling effort from radio astronomers. Addressing this challenge, we propose VisRec, a model-agnostic semi-supervised learning approach to the reconstruction of visibility data. Specifically, VisRec consists of both a supervised learning module and an unsupervised learning module. In the supervised learning module, we introduce a set of data augmentation functions to produce diverse training examples. In comparison, the unsupervised learning module in VisRec augments unlabeled data and uses reconstructions from non-augmented visibility data as pseudo-labels for training. This hybrid approach allows VisRec to effectively leverage both labeled and unlabeled data. This way, VisRec performs well even when labeled data is scarce. Our evaluation results show that VisRec outperforms all baseline methods in reconstruction quality, robustness against common observation perturbation, and generalizability to different telescope configurations.

eess.IV↗

arXiv2023

Dissecting the Runtime Performance of the Training, Fine-tuning, and Inference of Large Language Models

Large Language Models (LLMs) have seen great advance in both academia and industry, and their popularity results in numerous open-source frameworks and techniques in accelerating LLM pre-training, fine-tuning, and inference. Training and deploying LLMs are expensive as it requires considerable computing resources and memory, hence many efficient approaches have been developed for improving system pipelines as well as operators. However, the runtime performance can vary significantly across hardware and software stacks, which makes it difficult to choose the best configuration. In this work, we aim to benchmark the performance from both macro and micro perspectives. First, we benchmark the end-to-end performance of pre-training, fine-tuning, and serving LLMs in different sizes , i.e., 7, 13, and 70 billion parameters (7B, 13B, and 70B) on three 8-GPU platforms with and without individual optimization techniques, including ZeRO, quantization, recomputation, FlashAttention. Then, we dive deeper to provide a detailed runtime analysis of the sub-modules, including computing and communication operators in LLMs. For end users, our benchmark and findings help better understand different optimization techniques, training and inference frameworks, together with hardware platforms in choosing configurations for deploying LLMs. For researchers, our in-depth module-wise analyses discover potential opportunities for future work to further optimize the runtime performance of LLMs.

cs.PF↗

arXiv2023

PolarRec: Radio Interferometric Data Reconstruction with Polar Coordinate Representation

In radio astronomy, visibility data, which are measurements of wave signals from radio telescopes, are transformed into images for observation of distant celestial objects. However, these resultant images usually contain both real sources and artifacts, due to signal sparsity and other factors. One way to obtain cleaner images is to reconstruct samples into dense forms before imaging. Unfortunately, existing reconstruction methods often miss some components of visibility in frequency domain, so blurred object edges and persistent artifacts remain in the images. Furthermore, the computation overhead is high on irregular visibility samples due to the data skew. To address these problems, we propose PolarRec, a transformer-encoder-conditioned reconstruction pipeline with visibility samples converted into the polar coordinate representation. This representation matches the way in which radio telescopes observe a celestial area as the Earth rotates. As a result, visibility samples distribute in the polar system more uniformly than in the Cartesian space. Therefore, we propose to use radial distance in the loss function, to help reconstruct complete visibility effectively. Also, we group visibility samples by their polar angles and propose a group-based encoding scheme to improve the efficiency. Our experiments demonstrate that PolarRec markedly improves imaging results by faithfully reconstructing all frequency components in the visibility domain while significantly reducing the computation cost in visibility data encoding. We believe this high-quality and high-efficiency imaging of PolarRec will better facilitate astronomers to conduct their research.

astro-ph.IM↗

arXiv2023

A Conditional Denoising Diffusion Probabilistic Model for Radio Interferometric Image Reconstruction

In radio astronomy, signals from radio telescopes are transformed into images of observed celestial objects, or sources. However, these images, called dirty images, contain real sources as well as artifacts due to signal sparsity and other factors. Therefore, radio interferometric image reconstruction is performed on dirty images, aiming to produce clean images in which artifacts are reduced and real sources are recovered. So far, existing methods have limited success on recovering faint sources, preserving detailed structures, and eliminating artifacts. In this paper, we present VIC-DDPM, a Visibility and Image Conditioned Denoising Diffusion Probabilistic Model. Our main idea is to use both the original visibility data in the spectral domain and dirty images in the spatial domain to guide the image generation process with DDPM. This way, we can leverage DDPM to generate fine details and eliminate noise, while utilizing visibility data to separate signals from noise and retaining spatial information in dirty images. We have conducted experiments in comparison with both traditional methods and recent deep learning based approaches. Our results show that our method significantly improves the resulting images by reducing artifacts, preserving fine details, and recovering dim sources. This advancement further facilitates radio astronomical data analysis tasks on celestial phenomena.

astro-ph.IM↗