arXiv subjects

Quoc Long Tran

Publications and source records attributed to Quoc Long Tran.

4 recordsLinked to original sources

arXiv2025

LatentFM: A Latent Flow Matching Approach for Generative Medical Image Segmentation

Generative models have achieved remarkable progress with the emergence of flow matching (FM). It has demonstrated strong generative capabilities and attracted significant attention as a simulation-free flow-based framework capable of learning exact data densities. Motivated by these advances, we propose LatentFM, a flow-based model operating in the latent space for medical image segmentation. To model the data distribution, we first design two variational autoencoders (VAEs) to encode both medical images and their corresponding masks into a lower-dimensional latent space. We then estimate a conditional velocity field that guides the flow based on the input image. By sampling multiple latent representations, our method synthesizes diverse segmentation outputs whose pixel-wise variance reliably captures the underlying data distribution, enabling both highly accurate and uncertainty-aware predictions. Furthermore, we generate confidence maps that quantify the model certainty, providing clinicians with richer information for deeper analysis. We conduct experiments on two datasets, ISIC-2018 and CVC-Clinic, and compare our method with several prior baselines, including both deterministic and generative approach models. Through comprehensive evaluations, both qualitative and quantitative results show that our approach achieves superior segmentation accuracy while remaining highly efficient in the latent space.

cs.CV↗

arXiv2025

Diffusion Model in Latent Space for Medical Image Segmentation Task

Medical image segmentation is crucial for clinical diagnosis and treatment planning. Traditional methods typically produce a single segmentation mask, failing to capture inherent uncertainty. Recent generative models enable the creation of multiple plausible masks per image, mimicking the collaborative interpretation of several clinicians. However, these approaches remain computationally heavy. We propose MedSegLatDiff, a diffusion based framework that combines a variational autoencoder (VAE) with a latent diffusion model for efficient medical image segmentation. The VAE compresses the input into a low dimensional latent space, reducing noise and accelerating training, while the diffusion process operates directly in this compact representation. We further replace the conventional MSE loss with weighted cross entropy in the VAE mask reconstruction path to better preserve tiny structures such as small nodules. MedSegLatDiff is evaluated on ISIC-2018 (skin lesions), CVC-Clinic (polyps), and LIDC-IDRI (lung nodules). It achieves state of the art or highly competitive Dice and IoU scores while simultaneously generating diverse segmentation hypotheses and confidence maps. This provides enhanced interpretability and reliability compared to deterministic baselines, making the model particularly suitable for clinical deployment.

cs.CV↗

arXiv2025

Aleatoric Uncertainty Medical Image Segmentation Estimation via Flow Matching

Quantifying aleatoric uncertainty in medical image segmentation is critical since it is a reflection of the natural variability observed among expert annotators. A conventional approach is to model the segmentation distribution using the generative model, but current methods limit the expression ability of generative models. While current diffusion-based approaches have demonstrated impressive performance in approximating the data distribution, their inherent stochastic sampling process and inability to model exact densities limit their effectiveness in accurately capturing uncertainty. In contrast, our proposed method leverages conditional flow matching, a simulation-free flow-based generative model that learns an exact density, to produce highly accurate segmentation results. By guiding the flow model on the input image and sampling multiple data points, our approach synthesizes segmentation samples whose pixel-wise variance reliably reflects the underlying data distribution. This sampling strategy captures uncertainties in regions with ambiguous boundaries, offering robust quantification that mirrors inter-annotator differences. Experimental results demonstrate that our method not only achieves competitive segmentation accuracy but also generates uncertainty maps that provide deeper insights into the reliability of the segmentation outcomes. The code for this paper is freely available at https://github.com/huynhspm/Data-Uncertainty

cs.CV↗

arXiv2024

Training-Free Condition Video Diffusion Models for single frame Spatial-Semantic Echocardiogram Synthesis

Conditional video diffusion models (CDM) have shown promising results for video synthesis, potentially enabling the generation of realistic echocardiograms to address the problem of data scarcity. However, current CDMs require a paired segmentation map and echocardiogram dataset. We present a new method called Free-Echo for generating realistic echocardiograms from a single end-diastolic segmentation map without additional training data. Our method is based on the 3D-Unet with Temporal Attention Layers model and is conditioned on the segmentation map using a training-free conditioning method based on SDEdit. We evaluate our model on two public echocardiogram datasets, CAMUS and EchoNet-Dynamic. We show that our model can generate plausible echocardiograms that are spatially aligned with the input segmentation map, achieving performance comparable to training-based CDMs. Our work opens up new possibilities for generating echocardiograms from a single segmentation map, which can be used for data augmentation, domain adaptation, and other applications in medical imaging. Our code is available at \url{https://github.com/gungui98/echo-free}

eess.IV↗