arXiv subjects

R. Adhikari

Publications and source records attributed to R. Adhikari.

88 records · Page 5Linked to original sources

arXiv2008

Non-Markovian fluctuations in Markovian models of protein dynamics

Recent experiments using fluorescence spectroscopy have been able to probe the dynamics of conformational fluctuations in proteins. The fluctuations are Gaussian but do not decay exponentially, and are therefore, non-Markovian. We present a theory where non-Markovian fluctuation dynamics emerges naturally from the superposition of the Markovian fluctuations of the normal modes of the protein. A Rouse-like dynamics of the normal modes provides very good agreement to the experimentally measured correlation functions. We provide simple scaling arguments rationalising our results.

cond-mat.stat-mech↗

arXiv2008

The eigenspectra of Indian musical drums

In a family of drums used in the Indian subcontinent, the circular drum head is made of material of non-uniform density. Remarkably, and in contrast to a circular membrane of uniform density, the low eigenmodes of the non-uniform membrane are harmonic. In this work we model the drum head by a non-uniform membrane whose density varies smoothly between two prescribed values. Using a Fourier-Chebyshev spectral collocation method we obtain the eigenmodes and eigenvalues of the drum head. For a suitable choice of parameters, which we find by optimising a cost function, the eigenspectra obtained from our model are in excellent agreement with experimental values. Our model and the numerical method should find application in numerical sound synthesis.

math-ph↗

arXiv2008

Beating the spin-down limit on gravitational wave emission from the Crab pulsar

We present direct upper limits on gravitational wave emission from the Crab pulsar using data from the first nine months of the fifth science run of the Laser Interferometer Gravitational-wave Observatory (LIGO). These limits are based on two searches. In the first we assume that the gravitational wave emission follows the observed radio timing, giving an upper limit on gravitational wave emission that beats indirect limits inferred from the spin-down and braking index of the pulsar and the energetics of the nebula. In the second we allow for a small mismatch between the gravitational and radio signal frequencies and interpret our results in the context of two possible gravitational wave emission mechanisms.

astro-ph↗

arXiv2008

Numerical Method of Lines for the Relaxational Dynamics of Nematic Liquid Crystals

We propose an efficient numerical scheme, based on the method of lines, for solving the Landau-de Gennes equations describing the relaxational dynamics of nematic liquid crystals. Our method is computationally easy to implement, balancing requirements of efficiency and accuracy. We benchmark our method through the study of the following problems: the isotropic-nematic interface, growth of nematic droplets in the isotropic phase and the kinetics of coarsening following a quench into the nematic phase. Our results, obtained through solutions of the full coarse-grained equations of motion with no approximations, provide a stringent test of the de Gennes ansatz for the isotropic - nematic interface, illustrate the anisotropic character of droplets in the nucleation regime and validate dynamical scaling in the coarsening regime.

cond-mat.soft↗

arXiv2008

Arrest of Fluid Demixing by Nanoparticles: A Computer Simulation Study

We use lattice Boltzmann simulations to investigate the formation of arrested structures upon demixing of a binary solvent containing neutrally wetting colloidal particles. Previous simulations for symmetric fluid quenches pointed to the formation of `bijels': bicontinuous interfacially jammed emulsion gels. These should be created when a glassy monolayer of particles forms at the fluid-fluid interface, arresting further demixing, and rigidifying the structure. Experimental work has broadly confirmed this scenario, but shows that bijels can also be formed in volumetrically asymmetric quenches. Here we present new simulation results for such quenches, compare these to the symmetric case, and find a crossover to an arrested droplet phase at strong asymmetry. We then make extensive new analyses of the post-arrest dynamics in our simulated bijel and droplet structures, on time scales comparable to the Brownian time for colloid motion. Our results suggest that, on these intermediate time scales, the effective activation barrier to ejection of particles from the fluid-fluid interface is smaller by at least two orders of magnitude than the corresponding barrier for an isolated particle on a flat interface.

cond-mat.soft↗

arXiv2007

Duality in matrix lattice Boltzmann models

The notion of duality between the hydrodynamic and kinetic (ghost) variables of lattice kinetic formulations of the Boltzmann equation is introduced. It is suggested that this notion can serve as a guideline in the design of matrix versions of the lattice Boltzmann equation in a physically transparent and computationally efficient way.

cond-mat.stat-mech↗

arXiv2007

Singular forces and point-like colloids in lattice Boltzmann hydrodynamics

We present a second-order accurate method to include arbitrary distributions of force densities in the lattice Boltzmann formulation of hydrodynamics. Our method may be used to represent singular force densities arising either from momentum-conserving internal forces or from external forces which do not conserve momentum. We validate our method with several examples involving point forces and find excellent agreement with analytical results. A minimal model for dilute sedimenting particles is presented using the method which promises a substantial gain in computational efficiency.

cond-mat.soft↗

arXiv2005

Nonequilibrium steady states in sheared binary fluids

We simulate by lattice Boltzmann the steady shearing of a binary fluid mixture undergoing phase separation with full hydrodynamics in two dimensions. Contrary to some theoretical scenarios, a dynamical steady state is attained with finite domain lengths $L_{x,y}$ in the directions ($x,y)$ of velocity and velocity gradient. Apparent scaling exponents are estimated as $L_{x}\sim\dotγ^{-2/3}$ and $L_{y}\sim\dotγ^{-3/4}$. We discuss the relative roles of diffusivity and hydrodynamics in attaining steady state.

cond-mat.stat-mech↗

arXiv2005

Colloidal Jamming at Interfaces: a Route to Fluid-bicontinuous Gels

Colloidal particles or nanoparticles, with equal affinity for two fluids, are known to adsorb irreversibly to the fluid-fluid interface. We present large-scale computer simulations of the demixing of a binary solvent containing such particles. The newly formed interface sequesters the colloidal particles; as the interface coarsens, the particles are forced into close contact by interfacial tension. Coarsening is dramatically curtailed, and the jammed colloidal layer seemingly enters a glassy state, creating a multiply connected, solid-like film in three dimensions. The resulting gel contains percolating domains of both fluids, with possible uses as, for example, a microreaction medium.

cond-mat.soft↗

arXiv2005

Lattice Boltzmann for Binary Fluids with Suspended Colloids

A new description of the binary fluid problem via the lattice Boltzmann method is presented which highlights the use of the moments in constructing two equilibrium distribution functions. This offers a number of benefits, including better isotropy, and a more natural route to the inclusion of multiple relaxation times for the binary fluid problem. In addition, the implementation of solid colloidal particles suspended in the binary mixture is addressed, which extends the solid-fluid boundary conditions for mass and momentum to include a single conserved compositional order parameter. A number of simple benchmark problems involving a single particle at or near a fluid-fluid interface are undertaken and show good agreement with available theoretical or numerical results.

cond-mat.soft↗

arXiv2005

Fluctuating lattice Boltzmann

The lattice Boltzmann algorithm efficiently simulates the Navier Stokes equation of isothermal fluid flow, but ignores thermal fluctuations of the fluid, important in mesoscopic flows. We show how to adapt the algorithm to include noise, satisfying a fluctuation-dissipation theorem (FDT) directly at lattice level: this gives correct fluctuations for mass and momentum densities, and for stresses, at all wavevectors $k$. Unlike previous work, which recovers FDT only as $k\to 0$, our algorithm offers full statistical mechanical consistency in mesoscale simulations of, e.g., fluctuating colloidal hydrodynamics.

cond-mat.stat-mech↗

arXiv2005

Sliding periodic boundary conditions for lattice Boltzmann and lattice kinetic equations

We present a method to impose linear shear flow in discrete-velocity kinetic models of hydrodynamics through the use of sliding periodic boundary conditions. Our method is derived by an explicit coarse-graining of the Lees-Edwards boundary conditions for Couette flow in molecular dynamics, followed by a projection of the resulting equations onto the subspace spanned by the discrete velocities of the lattice Boltzmann method. The boundary conditions are obtained without resort to perturbative expansions or modifications of the discrete velocity equilibria, allowing our method to be applied to a wide class of lattice Boltzmann models. Our numerical results for the sheared hydrodynamics of a one-component isothermal fluid show excellent agreement with analytical results, while for a two-component fluid the results show a clear improvement over previous methods for introducing Lees-Edwards boundary conditions into lattice Boltzmann. Using our method, we obtain a dynamical steady state in a sheared spinodally decomposing two-dimensional fluid, under conditions where previous methods give spurious finite-size artifacts.

cond-mat.soft↗

arXiv2004

Physical and Computational Scaling Issues in Lattice Boltzmann Simulations of Binary Fluid Mixtures

We describe some scaling issues that arise when using lattice Boltzmann methods to simulate binary fluid mixtures -- both in the presence and in the absence of colloidal particles. Two types of scaling problem arise: physical and computational. Physical scaling concerns how to relate simulation parameters to those of the real world. To do this effectively requires careful physics, because (in common with other methods) lattice Boltzmann cannot fully resolve the hierarchy of length, energy and time scales that arise in typical flows of complex fluids. Care is needed in deciding what physics to resolve and what to leave unresolved, particularly when colloidal particles are present in one or both of two fluid phases. This influences steering of simulation parameters such as fluid viscosity and interfacial tension. When the physics is anisotropic (for example, in systems under shear) careful adaptation of the geometry of the simulation box may be needed; an example of this, relating to our study of the effect of colloidal particles on the Rayleigh-Plateau instability of a fluid cylinder, is described. The second and closely related set of scaling issues are computational in nature: how do you scale up simulations to very large lattice sizes? The problem is acute for systems undergoing shear flow. Here one requires a set of blockwise co-moving frames to the fluid, each connected to the next by a Lees-Edwards like boundary condition. These matching planes lead to small numerical errors whose cumulative effects can become severe; strategies for minimising such effects are discussed.

cond-mat.soft↗

arXiv2004

Simulating Colloid Hydrodynamics with Lattice Boltzmann

We present a progress report on our work on lattice Boltzmann methods for colloidal suspensions. We focus on the treatment of colloidal particles in binary solvents and on the inclusion of thermal noise. For a benchmark problem of colloids sedimenting and becoming trapped by capillary forces at a horizontal interface between two fluids, we discuss the criteria for parameter selection, and address the inevitable compromise between computational resources and simulation accuracy.

cond-mat.soft↗

arXiv2001

Anomalous magnetic moment of muon and L-violating Supersymmetric Models

We consider L-violating Supersymmetric Models to explain the recent muon $g_μ -2$ deviation from the Standard Model. The order of trilinear L-violating couplings which we require also generate neutrino mass which is somewhat higher than expected unless one considers highly suppressed $L-R$ mixing of sfermions. However, without such fine tuning for sfermions it is possible to get appropriate muon $g_μ-2$ deviation as well as neutrino mass if one considers some horizontal symmetry for the lepton doublet. Our studies show that $g_μ -2$ deviation may not imply upper bound of about 500 GeV on masses of supersymmetric particles like chargino or neutralino as proposed by other authors for R parity conserving supersymmetric models. However, in our scenario sneutrino mass is expected to be light ($\sim 100$ GeV) and $e-μ-τ$ universality violation may be observed experimentally in near future.

hep-ph↗

arXiv1999

Constraints on mixing angles of Majorana neutrinos

By combining the inputs from the neutrinoless double beta decay and the fits of cosmological models of dark matter with solar and atmospheric neutrino data, we obtain constraints on two of the mixing angles of Majorana neutrinos, which become stronger when coupled with the reactor neutrino data. These constraints are strong enough to rule out Majorana neutrinos if the small angle solution of solar neutrino puzzle is borne out.

hep-ph↗