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R. Gutierrez

Publications and source records attributed to R. Gutierrez.

At least 19 recordsLinked to original sources

The contribution of intermolecular spin interactions to the London dispersion forces between chiral molecules

Dispersion interactions are one of the components of van der Waals (vdW) forces, which play a key role in the understanding of intermolecular interactions in many physical, chemical and biological processes. The theory of dispersion forces was developed by London in the early years of quantum mechanics. However, it was only in the 1960s that it was recognized that for molecules lacking an inversion center such as chiral and helical molecules, there are chirality-sensitive corrections to the dispersion forces proportional to the rotatory power known from the theory of circular dichroism and with the same distance scaling law R-6 as the London energy. The discovery of the Chirality-Induced Spin Selectivity (CISS) effect in recent years has led to an additional twist in the study of chiral molecular systems, showing a close relation between spin and molecular geometry. Motivated by it, we propose in this investigation to describe the mutual induction of charge and spin-density fluctuations in a pair A-B of chiral molecules by a simple physical model. The model assumes that the same fluctuating electric fields responsible for vdW forces can induce a magnetic response via a Rashba-like term, so that an spin-orbit field acting on molecule B is generated by the electric field arising from charge density fluctuations in molecule A (and viceversa). Within a second-order perturbative approach, these contributions manifest as an effective intermolecular exchange interaction. Although expected to be weaker than the standard London forces, these interactions display the same R$^6$ distance scaling.

cond-mat.mes-hall

Mechanical transmission of rotational motion between molecular-scale gears

Manipulating and coupling molecule gears is the first step towards realizing molecular-scale mechanical machines. Here, we theoretically investigate the behavior of such gears using molecular dynamics simulations. Within a nearly rigid-body approximation we reduce the dynamics of the gears to the rotational motion around the orientation vector. This allows us to study their behavior based on a few collective variables. Specifically, for a single hexa (4-tert-butylphenyl) benzene molecule we show that the rotational-angle dynamics corresponds to the one of a Brownian rotor. For two such coupled gears, we extract the effective interaction potential and find that it is strongly dependent on the center of mass distance. Finally, we study the collective motion of a train of gears. We demonstrate the existence of three different regimes depending on the magnitude of the driving-torque of the first gear: underdriving, driving and overdriving, which correspond, respectively, to no collective rotation, collective rotation and only single gear rotation. This behavior can be understood in terms of a simplified interaction potential.

cond-mat.soft

Electron transport through self-assembled monolayers of tripeptides

We report how the electron transport through a solid-state metal/Gly-Gly-His tripeptide (GGH) monolayer/metal junction and the metal/GGH work function are modified by the GGH complexation with Cu2+ ions. Conducting AFM is used to measure the current-voltage histograms. The work function is characterized by combining macroscopic Kelvin probe and Kelvin probe force microscopy at the nanoscale. We observe that the Cu2+ ions complexation with the GGH monolayer is highly dependent on the molecular surface density and results in opposite trends. In the case of a high density monolayer the conformational changes are hindered by the proximity of the neighboring peptides, hence forming an insulating layer in response to copper-complexation. Whereas the slightly lower density monolayers allow for the conformational change to a looped peptide wrapping the Cu-ion, which results in a more conductive monolayer. Copper-ion complexation to the high- and low-density monolayers systematically induces an increase of the work functions. Copper-ion complexation to the low-density monolayer induces an increase of electron transport efficiency, while the copper-ion complexation to the high-density monolayer results in a slight decrease of electron transport. Both of the observed trends are in agreement with first-principle calculations. Complexed copper to low density GGH-monolayer induces a new gap state slightly above the Au Fermi energy that is absent in the high density monolayer.

physics.app-ph

Contact effects in spin transport along double-helical molecules

We report on spin transport along double-helical molecular systems by considering various contact configurations and asymmetries between the two helical strands in the regime of completely coherent charge transport. Our results reveal that no spin polarization appears in two-terminal molecular devices when coupled to one-dimensional electrodes. The same holds in the case of finite-width electrodes if there is a \emph{bottleneck} of one single site in the system electrode--molecule--electrode. Then, additional dephasing is necessary to induce spin-filtering effects. In contrast, nonzero spin polarization is found in molecular devices with multiple terminals or with two finite-width electrodes, each of them connected to more than one site of the molecule. Then, the magnitude of spin polarization can be enhanced by increasing the asymmetry between the two strands. We point out that the spin-filtering effects could emerge in double-helical molecular devices at low temperature without dephasing by a proper choice of the electrode number and the connection between the molecule and the electrodes.

cond-mat.mes-hall

Whitepaper on the DAEdALUS Program

This whitepaper describes the status of the DAEdALUS program for development of high power cyclotrons as of the time of the final meeting of the Division of Particles and Fields 2013 Community Study ("Snowmass"). We report several new results, including a measurement capability between 4 and 12 degrees on the CP violating parameter in the neutrino sector. Past results, including the capability of the IsoDAR high Dm^2 antielectron neutrino disappearance search, are reviewed. A discussion of the R&D successes, including construction of a beamline teststand, and future plans are provided. This text incorporates short whitepapers written for subgroups in the Intensity Frontier and Frontier Capabilities Working Groups that are available on the Snowmass website.

physics.acc-ph

Charge migration in organic materials: Can propagating charges affect the key physical quantities controlling their motion?

Charge migration is a ubiquitous phenomenon with profound implications throughout many areas of chemistry, physics, biology and materials science. The long-term vision of designing functional materials with tailored molecular scale properties has triggered an increasing quest to identify prototypical systems where truly molecular conduction pathways play a fundamental role. Such pathways can be formed due to the molecular organization of various organic materials and are widely used to discuss electronic properties at the nanometer scale. Here, we present a computational methodology to study charge propagation in organic molecular stacks at nano and sub-nanoscales and exploit this methodology to demonstrate that moving charge carriers strongly affect the values of the physical quantities controlling their motion. The approach is also expected to find broad application in the field of charge migration in soft matter systems.

cond-mat.mtrl-sci

Spin selective transport through helical molecular systems

Highly spin selective transport of electrons through a helically shaped electrostatic potential is demonstrated in the frame of a minimal model approach. The effect is significant even in the case of weak spin-orbit coupling. Two main factors determine the selectivity, an unconventional Rashba- like spin-orbit interaction, reflecting the helical symmetry of the system, and a weakly dispersive electronic band of the helical system. The weak electronic coupling, associated with the small dispersion, leads to a low mobility of the charges in the system and allows even weak spin-orbit interactions to be effective. The results are expected to be generic for chiral molecular systems displaying low spin-orbit coupling and low conductivity.

cond-mat.mes-hall

Heat transport and thermal rectification in quasi-one-dimensional systems

In this work we investigate heat conduction along a ladder-model conformed by two coupled one dimensional lattices with different anharmonicity. We study how the interchain coupling modifies the thermal properties of the isolated systems. For a large enough coupling strength, we demonstrate that a harmonic lattice interacting with an anharmonic one is able to support a linear thermal gradient when it is connected to two heat reservoirs at different temperatures. We estimate this critical coupling by applying the self-consistent phonon theory (SCPT) to the anharmonic counterpart. By exchanging the heat baths connections between the harmonic and the anharmonic chains, our results show that the coupled system reveals as a thermal rectifier.

cond-mat.stat-mech

Structural fluctuations and quantum transport through DNA molecular wires: a combined molecular dynamics and model Hamiltonian approach

Charge transport through a short DNA oligomer (Dickerson dodecamer) in presence of structural fluctuations is investigated using a hybrid computational methodology based on a combination of quantum mechanical electronic structure calculations and classical molecular dynamics simulations with a model Hamiltonian approach. Based on a fragment orbital description, the DNA electronic structure can be coarse-grained in a very efficient way. The influence of dynamical fluctuations arising either from the solvent fluctuations or from base-pair vibrational modes can be taken into account in a straightforward way through time series of the effective DNA electronic parameters, evaluated at snapshots along the MD trajectory. We show that charge transport can be promoted through the coupling to solvent fluctuations, which gate the onsite energies along the DNA wire.

cond-mat.soft

Engineering the thermopower in semiconductor-molecule junctions: towards high thermoelectric efficiency at the nanoscale

We propose a possible route to achieve high thermoelectric efficiency in molecular junctions by combining a local chemical tuning of the molecular electronic states with the use of semiconducting electrodes. The former allows to control the position of the HOMO transmission resonance with respect to the Fermi energy while the latter fulfills a twofold purpose: the suppression of electron-like contributions to the thermopower and the cut-off of the HOMO transmission tails into the semiconductor band gap. As a result a large thermopower can be obtained. Our results strongly suggest that large figures of merit in such molecular junctions can be achieved.

cond-mat.mtrl-sci

The LAEX and NASA portals for CoRoT public data

* Aims. We describe here the main functionalities of the LAEX (Laboratorio de Astrofisica Estelar y Exoplanetas/Laboratory for Stellar Astrophysics and Exoplanets) and NASA portals for CoRoT Public Data. The CoRoT archive at LAEX was opened to the community in January 2009 and is managed in the framework of the Spanish Virtual Observatory. NStED (NASA Star and Exoplanet Database) serves as the CoRoT portal for the US astronomical community. NStED is a general purpose stellar and exoplanet archive with the aim of providing support for NASA planet finding and characterisation goals, and the planning and support of NASA and other space missions. CoRoT data at LAEX and NStED can be accessed at http://sdc.laeff.inta.es/corotfa/ and http://nsted.ipac.caltech.edu,respectively. * Methods. Based on considerable experience with astronomical archives, the aforementioned archives are designed with the aim of delivering science-quality data in a simple and efficient way. * Results. LAEX and NStED not only provide access to CoRoT Public Data but furthermore serve a variety of observed and calculated astrophysical data. In particular, NStED provides scientifically validated information on stellar and planetary data related to the search for and characterization of extrasolar planets, and LAEX makes any information from Virtual Observatory services available to the astronomical community.

astro-ph.SR

Charge transport through bio-molecular wires in a solvent: Bridging molecular dynamics and model Hamiltonian approaches

We present a hybrid method based on a combination of quantum/classical molecular dynamics (MD) simulations and a mod el Hamiltonian approach to describe charge transport through bio-molecular wires with variable lengths in presence o f a solvent. The core of our approach consists in a mapping of the bio-molecular electronic structure, as obtained f rom density-functional based tight-binding calculations of molecular structures along MD trajectories, onto a low di mensional model Hamiltonian including the coupling to a dissipative bosonic environment. The latter encodes fluctuat ion effects arising from the solvent and from the molecular conformational dynamics. We apply this approach to the c ase of pG-pC and pA-pT DNA oligomers as paradigmatic cases and show that the DNA conformational fluctuations are essential in determining and supporting charge transport.

cond-mat.soft

An IPHAS-based search for accreting very low-mass objects using VO tools

The main goal of this paper is to prove that accreting very low-mass stars and brown dwarfs can be identified in IPHAS, a Halpha emission survey of the northern Milky Way.Full exploitation of the IPHAS database and a future extension of it in the southern hemisphere will be useful to identify very low-mass accreting objects near and far well-known star forming regions. We have used Virtual Observatory tools to cross-match the IPHAS catalogue with the 2MASS catalogue. We defined photometric criteria to identify Halpha emission sources with near-infrared colours similar to known young very low-mass stars and brown dwarfs. 4000 candidates were identified that met our criteria over an area of 1600 square degrees. We present low-resolution optical spectra of 113 candidates. Spectral types have been derived for the 33 candidates that have spectroscopically confirmed Halpha emission, negligible reddening and M spectral class. We have also measured Halpha emission and investigated the NaI doublet (818.3 nm, 819.5 nm) in these 33 objects. We confirm that 33 IPHAS candidates have strong Halpha indicative of disk accretion for their spectral type. 23 of them have spectral class M4 or later, of which 10 have classes in the range M5.5-M7.0 and thus could be very young brown dwarfs. Also many objects have weak NaI doublet, an indication of low surface gravity.We conclude that IPHAS provides a very valuable database to identify accreting very low-mass stars and brown dwarfs, and that Virtual Observatory tools provide an efficient method for identifying these objects over large areas of the sky. Based on our success rate of 23 Halpha emission objects with spectral type in the range M4-M7 out of 113 candidates with spectroscopic follow-up, we estimate that there could be hundreds of such objects in the full IPHAS survey.

astro-ph

Radio Astronomy Data Model for Single-Dish Multiple-Feed Telescopes, and Robledo Archive Architecture

All the effort that the astrophysical community has put into the development of the Virtual Observatory (VO) has surpassed the non-return point: the VO is a reality today, and an initiative that will self-sustain, and to which all archival projects must adhere. We have started the design of the scientific archive for the DSS-63 70-m antenna at NASA's DSN station in Robledo de Chavela (Madrid). Here we show how we can use all VO proposed data models to build a VO-compliant single-dish, multiple-feed, radio astronomical archive data model (RADAMS) suitable for the archival needs of the antenna. We also propose an exhaustive list of Universal Content Descriptors (UCDs) and FITS keywords for all relevant metadata. We will further refine this data model with the experience that we will gain from that implementation.

astro-ph

VOSA: Virtual Observatory SED Analyzer. An application to the Collinder 69 open cluster

The physical properties of almost any kind of astronomical object can be derived by fitting synthetic spectra or photometry extracted from theoretical models to observational data. We want to develop an automatic procedure to perform this kind of fittings to a relatively large sample of members of a stellar association and apply this methodology to the case of Collinder 69. We combine the multiwavelength data of our sources and follow a work-flow to derive the physical parameters of the sources. The key step of the work-flow is performed by a new VO-tool, VOSA. All the steps in this process are done in a VO environment. We present this new tool, and provide physical parameters such as T$_{\rm eff}$, gravity, luminosity, etc. for $\sim$170 candidate members to Collinder 69, and an upper-limit for the age of this stellar association. This kind of studies of star forming regions, clusters, etc. produces a huge amount of data, very tedious to analyse using the traditional methodology. Thus, they are excellent examples where to apply the VO capabilities.

astro-ph

Green function techniques in the treatment of quantum transport at the molecular scale

The theoretical investigation of charge (and spin) transport at nanometer length scales requires the use of advanced and powerful techniques able to deal with the dynamical properties of the relevant physical systems, to explicitly include out-of-equilibrium situations typical for electrical/heat transport as well as to take into account interaction effects in a systematic way. Equilibrium Green function techniques and their extension to non-equilibrium situations via the Keldysh formalism build one of the pillars of current state-of-the-art approaches to quantum transport which have been implemented in both model Hamiltonian formulations and first-principle methodologies. We offer a tutorial overview of the applications of Green functions to deal with some fundamental aspects of charge transport at the nanoscale, mainly focusing on applications to model Hamiltonian formulations.

cond-mat.mes-hall

Stellar Population Challenge: analysis of M67 with the VO

In this poster we present the analysis of the CMD of M67 (proposed in the Stellar Population Challenge) performed with VO applications. We found that, although the VO environment is still not ready to perform a complete analysis, its use provides highly useful additional information for the analysis. Thanks to the current VO framework, we are able to identify stars in the provided CMD that are not suitable for isochrone fitting. Additionally, we can complete our knowledge of this cluster extending the analysis to IR colors, which were not provided in the original data but that are available thanks to the VO. On the negative side, we find it difficult to access theoretical data from VO applications, so, currently, it is not possible to perform completely the analysis of the cluster inside the VO framework. However it is expected that the situation will improve in a near future.

astro-ph

Cool objects: From SED fitting to age estimation

The physical properties of almost any kind of astronomical object can be derived by fitting synthetic spectra or photometry extracted from theoretical models to observational data. This process usually involves working with multiwavelength data, which is one of the cornerstones of the VO philosophy. From this kind of studies, when combining with theoretical isochrones one can even estimate ages. We present here the results obtained from a code designed to perform chi^2 tests to both spectroscopic models (or the associated synthetic photometry) and combinations of blackbodies (including modified blackbodies). Some steps in this process can already be done in a VO environment, and the rest are in the process of development. We must note that this kind of studies in star forming regions, clusters, etc. produce a huge amount of data, very tedious to analyze using the traditional methodology. This make them excellent examples where to apply the VO capabilities.

astro-ph