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R. Vuilleumier

Publications and source records attributed to R. Vuilleumier.

5 recordsLinked to original sources

Infrared spectroscopy of protonated water clusters via the quantum thermal bath method and highly accurate machine-learned potentials

The spectral features of water clusters provide important information on their structure and dynamics and can assist in deciphering the nature of the local environment of aqueous solutions in a variety of different conditions. Accurately capturing these features via numerical simulations is a non-trivial task that typically requires a sophisticated combination of high-level electronic structure methods and costly quantum dynamics techniques. We present results of molecular dynamics simulations of the IR spectra of protonated water clusters, ranging from the monomer to the tetramer, obtained via the combination of highly accurate machine-learned potential energy surfaces (PES) and dipole moment surfaces (DMS), and the quantum thermal bath (QTB) methodology which facilitates cost-effective inclusion of NQEs in molecular dynamics simulations. We compare our results with previous theoretical and experimental studies and show that this combination provides a significantly cheaper, yet still suitably accurate, alternative to more traditional computational approaches.

physics.comp-ph

Modelling thermoresponsive polymer brush by mesoscale computer simulations

We consider a functional surface comprising thermoresponsive polymer chains, the material that has found numerous technological and biomedical applications. However, to achieve the required time and length scales for computer modelling of such applications, one is compelled to use coarse-grained mesoscopic modelling approaches. The model used here is based on the previous work [Soto-Figueroa et al., Soft Matter, 8, 1871 (2012)], and it mimics the principal feature of the poly(N-iso-propylacrylamide) (PNIPAM), namely, the rapid change of its hydrophilicity at the lower critical solution temperature (LCST). For the case of an isolated chain, we discuss scaling properties of the radius of gyration, end-to-end distance, various distribution functions, and the density profile of monomers below and above the LCST. For the case of the model thermoresposive brush, we search for the optimum grafting density at which the change in the brush height, upon crossing the LCST, reaches its maximum value. The interpretation of the thermoresponse, in terms of the Alexander-de Gennes blobs and the level of solvation of polymer chains in a brush, is provided.

cond-mat.soft

Electronic redistribution around oxygen atoms in silicate melts by ab initio molecular dynamics simulation

The structure around oxygen atoms of four silicate liquids (silica, rhyolite, a model basalt and enstatite) is evaluated by ab initio molecular dynamics simulation. Thanks to the use of maximally localized Wannier orbitals to represent the electronic ground state of the simulated system, one is able to quantify the redistribution of electronic density around oxygen atoms as a function of the cationic environment and melt composition. It is shown that the structure of the melt in the immediate vicinity of the oxygen atoms modulates the distribution of the Wannier orbitals associated with oxygen atoms. In particular the evaluation of the distances between the oxygen-core and the orbital Wannier centers and their evolution with the nature of the cation indicates that the Al-O bond in silicate melts is certainly less covalent than the Si-O bond while for the series Mg-O, Ca-O, Na-O and K-O the covalent character of the M-O bond diminishes rapidly to the benefit of the ionic character. Furthermore it is found that the distribution of the oxygen dipole moment coming from the electronic polarization is only weakly dependent on the melt composition, a finding which could explain why some empirical force fields can exhibit a high degree of transferability with melt composition.

cond-mat.mtrl-sci

Computer modeling of natural silicate melts: what can we learn from ab initio simulations

The structural and dynamical properties of four silicate liquids (silica, rhyolite, a model basalt and enstatite) are evaluated by ab initio molecular dynamics simulation using the density functional theory and are compared with classical simulations using a simple empirical force field. For a given composition, the structural parameters of the simulated melt vary little between the two calculations (ab initio versus empirical) and are in satisfactory agreement with structure data available in the literature. In contrast, ionic diffusivities and atomic vibration motions are found to be more sensitive to the details of the interactions. Furthermore, it is pointed out that the electronic polarization, as evaluated by the ab initio calculation, contributes significantly to the intensity of the infrared absorption spectra of molten silicates, a spectral feature which cannot be reproduced using nonpolarizable force field. However the vibration modes of TO4 species and some structural details are not accurately reproduced by our ab initio calculation, shortcomings which need to be improved in the future.

cond-mat.stat-mech

Improved modelling of liquid GeSe$_2$: the impact of the exchange-correlation functional

The structural properties of liquid GeSe$_2$ are studied by using first-principles molecular dynamics in conjuncton with the Becke, Lee, Yang and Parr (BLYP) generalized gradient approximation for the exchange and correlation energy. The results on partial pair correlation functions, coordination numbers, bond angle distributions and partial structure factors are compared with available experimental data and with previous first-principle molecular dynamics results obtained within the Perdew and Wang (PW) generalized gradient approximation for the exchange and correlation energy. We found that the BLYP approach substantially improves upon the PW one in the case of the short-range properties. In particular, the Ge$-$Ge pair correlation function takes a more structured profile that includes a marked first peak due to homopolar bonds, a first maximum exhibiting a clear shoulder and a deep minimum, all these features being absent in the previous PW results. Overall, the amount of tetrahedral order is significantly increased, in spite of a larger number of Ge$-$Ge homopolar connections. Due to the smaller number of miscoordinations, diffusion coefficients obtained by the present BLYP calculation are smaller by at least one order of magnitude than in the PW case.

cond-mat.mtrl-sci