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Rachel McCrea

Publications and source records attributed to Rachel McCrea.

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A continuous-time Markov chain framework for population size estimation from multi-list data: accounting for absorbing lists and asymmetric interactions

We introduce a continuous-time Markov chain framework for estimating population size from multi-list data, which allows directional interactions to be modelled and can accommodate absorbing lists, such as death records, or more general data collection processes. The standard model of the continuous-time Markov chain framework and the log-linear model for multi-list data are equivalent when lists are independent and we show empirically that they give similar results in the presence of dependencies between lists. Through a simulation study, we highlight the need to account for an absorbing list by using the Markov model or the log-linear model with forced absorbing interactions, observing biased estimates of the population size otherwise. We motivate our approach with an epidemiological dataset concerning individuals suffering from a first ever stroke in North-West England, in which one of the lists is a death record. We illustrate a further use of our approach by considering a case of ordered lists on drug use data from the City of London.

stat.ME

Loss based prior for the degrees of freedom of the Wishart distribution

Motivated by the proliferation of extensive macroeconomic and health datasets necessitating accurate forecasts, a novel approach is introduced to address Vector Autoregressive (VAR) models. This approach employs the global-local shrinkage-Wishart prior. Unlike conventional VAR models, where degrees of freedom are predetermined to be equivalent to the size of the variable plus one or equal to zero, the proposed method integrates a hyperprior for the degrees of freedom to account for the uncertainty about the parameter values. Specifically, a loss-based prior is derived to leverage information regarding the data-inherent degrees of freedom. The efficacy of the proposed prior is demonstrated in a multivariate setting for forecasting macroeconomic data, as well as Dengue infection data.

stat.ME

Estimating abundance from multiple sampling capture-recapture data via a multi-state multi-period stopover model

The collection of capture-recapture data often involves collecting data on numerous capture occasions over a relatively short period of time. For many study species this process is repeated, for example annually, resulting in capture information spanning multiple sampling periods. The robust design class of models provide a convenient framework in which to analyse all of the available capture data in a single likelihood expression. However, these models typically rely either upon the assumption of closure within a sampling period (the closed robust design) or condition on the number of individuals captured within a sampling period (the open robust design). The models we develop in this paper require neither assumption by explicitly modelling the movement of individuals into the population both within and between the sampling periods, which in turn permits the estimation of abundance. These models are further extended to allow parameters to depend not only on capture occasion but also the amount of time since joining the population and to the case of multi-state data where there is individual time-varying discrete covariate information. We derive an efficient likelihood expression for the new multi-state multi-period stopover model using the hidden Markov model framework. We demonstrate the new model through a simulation study before considering a dataset on great crested newts, Triturus cristatus.

stat.ME