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Rafael Mohr

Publications and source records attributed to Rafael Mohr.

9 recordsLinked to original sources

Engineered Complete Intersections: Algorithmic Aspects

Engineered Complete Intersections (ECI's) are a class of sparse polynomial systems frequently arising in a number of contexts, both in pure mathematics (e.g. enumerative geometry) and applications (e.g. chemical reaction networks). Based on theoretical results given by the first author, we give several contributions. First we give a new effective technique to tropicalize such systems by generalizing the classical notion of mixed subdivisions introduced by Huber and Sturmfels (1995) to ECI's with the particular goal to efficiently count solutions of square systems of equations in ECI form. We further design a tropical homotopy continuation algorithm for computing such mixed subdivisions, inspired by Jensen (2016), Malajovich (2017) and Daisey and Ren (2024). Our techniques can be used to numerically solve such systems by coupling them with the algorithms introduced by Helminck, Henriksson and Ren (2024). Finally, we give an algorithm to compute Newton polytopes of eliminants of ECI's. This gives a new way to compute, for example, Newton polytopes of so-called $A$-discriminants. Coupled with evaluation-interpolation paradigms our algorithm gives an efficient approach to compute such eliminants. We implemented our algorithms in the form of a software package which we use to demonstrate their practical feasibility on a range of examples.

cs.SC

A data structure for monomial ideals with applications to signature Gröbner bases

We introduce monomial divisibility diagrams (MDDs), a data structure for monomial ideals that supports insertion of new generators and fast membership tests. MDDs stem from a canonical tree representation by maximally sharing equal subtrees, yielding a directed acyclic graph. We establish basic complexity bounds for membership and insertion, and study empirically the size of MDDs. As an application, we integrate MDDs into the signature Gröbner basis implementation of the Julia package AlgebraicSolving.jl. Membership tests in monomial ideals are used to detect some reductions to zero, and the use of MDDs leads to substantial speed-ups compared to the existing representation by lists of generators with divmasks.

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Faster computation of Whitney stratifications and their minimization

We describe two new algorithms for the computation of Whitney stratifications of real and complex algebraic varieties. The first algorithm is a modification of the algorithm of Helmer and Nanda (HN), but is made more efficient by using techniques for equidimensional decomposition rather than computing the set of associated primes of a polynomial ideal at a key step in the HN algorithm. We note that this modified algorithm may fail to produce a minimal Whitney stratification even when the HN algorithm would produce a minimal stratification. The second algorithm coarsens a given Whitney stratification of a complex variety to the unique minimal Whitney stratification; we refer to this as the minimization of a stratification. The theoretical basis for our approach is a classical result of Teissier. To our knowledge this yields the first algorithm for computing a minimal Whitney stratification.

math.AG

On the Computation of Newton Polytopes of Eliminants

For systems of polynomial equations, we study the problem of computing the Newton polytope of their eliminants. As was shown by Esterov and Khovanskii, such Newton polytopes are mixed fiber polytopes of the Newton polytopes of the input equations. We use their results in combination with mixed subdivisions to design an algorithm computing these special polytopes. We demonstrate the increase in practical performance of our algorithm compared to existing methods using tropical geometry and discuss the differences that lead to this increase in performance. We also demonstrate an application of our work to differential elimination.

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Wronski Pairs of Honeycomb Curves

We study certain generic systems of real polynomial equations associated with triangulations of convex polytopes and investigate their number of real solutions. Our main focus is set on pairs of plane algebraic curves which form a so-called Wronski system. The computational tasks arising in the analysis of such Wronski pairs lead us to the frontiers of current computer algebra algorithms and their implementations, both via Gröbner bases and numerical algebraic geometry.

math.AG

A Syzygial Method for Equidimensional Decomposition

Based on a theorem by Vasconcelos, we give an algorithm for equidimensional decomposition of algebraic sets using syzygy computations via Gröbner bases. This algorithm avoids the use of elimination, homological algebra and processing the input equations one-by-one present in previous algorithms. We experimentally demonstrate the practical interest of our algorithm compared to the state of the art.

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Computing Generic Fibers of Polynomial Ideals with FGLM and Hensel Lifting

We describe a version of the FGLM algorithm that can be used to compute generic fibers of positive-dimensional polynomial ideals. It combines the FGLM algorithm with a Hensel lifting strategy. In analogy with Hensel lifting, we show that this algorithm has a complexity quasi-linear in the number of terms of certain $\mathfrak{m}$-adic expansions we compute. Some provided experimental data also demonstrates the practical efficacy of our algorithm.

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A Direttissimo Algorithm for Equidimensional Decomposition

We describe a recursive algorithm that decomposes an algebraic set into locally closed equidimensional sets, i.e. sets which each have irreducible components of the same dimension. At the core of this algorithm, we combine ideas from the theory of triangular sets, a.k.a. regular chains, with Gröbner bases to encode and work with locally closed algebraic sets. Equipped with this, our algorithm avoids projections of the algebraic sets that are decomposed and certain genericity assumptions frequently made when decomposing polynomial systems, such as assumptions about Noether position. This makes it produce fine decompositions on more structured systems where ensuring genericity assumptions often destroys the structure of the system at hand. Practical experiments demonstrate its efficiency compared to state-of-the-art implementations.

cs.SC

A Signature-based Algorithm for Computing the Nondegenerate Locus of a Polynomial System

Polynomial system solving arises in many application areas to model non-linear geometric properties. In such settings, polynomial systems may come with degeneration which the end-user wants to exclude from the solution set. The nondegenerate locus of a polynomial system is the set of points where the codimension of the solution set matches the number of equations. Computing the nondegenerate locus is classically done through ideal-theoretic operations in commutative algebra such as saturation ideals or equidimensional decompositions to extract the component of maximal codimension. By exploiting the algebraic features of signature-based Gröbner basis algorithms we design an algorithm which computes a Gröbner basis of the equations describing the closure of the nondegenerate locus of a polynomial system, without computing first a Gröbner basis for the whole polynomial system.

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