arXiv subjects

Raul Santos-Rodriguez

Publications and source records attributed to Raul Santos-Rodriguez.

At least 55 records · Page 3Linked to original sources

arXiv2023

Transfer Learning and Class Decomposition for Detecting the Cognitive Decline of Alzheimer Disease

Early diagnosis of Alzheimer's disease (AD) is essential in preventing the disease's progression. Therefore, detecting AD from neuroimaging data such as structural magnetic resonance imaging (sMRI) has been a topic of intense investigation in recent years. Deep learning has gained considerable attention in Alzheimer's detection. However, training a convolutional neural network from scratch is challenging since it demands more computational time and a significant amount of annotated data. By transferring knowledge learned from other image recognition tasks to medical image classification, transfer learning can provide a promising and effective solution. Irregularities in the dataset distribution present another difficulty. Class decomposition can tackle this issue by simplifying learning a dataset's class boundaries. Motivated by these approaches, this paper proposes a transfer learning method using class decomposition to detect Alzheimer's disease from sMRI images. We use two ImageNet-trained architectures: VGG19 and ResNet50, and an entropy-based technique to determine the most informative images. The proposed model achieved state-of-the-art performance in the Alzheimer's disease (AD) vs mild cognitive impairment (MCI) vs cognitively normal (CN) classification task with a 3\% increase in accuracy from what is reported in the literature.

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arXiv2023

Identification, explanation and clinical evaluation of hospital patient subtypes

We present a pipeline in which unsupervised machine learning techniques are used to automatically identify subtypes of hospital patients admitted between 2017 and 2021 in a large UK teaching hospital. With the use of state-of-the-art explainability techniques, the identified subtypes are interpreted and assigned clinical meaning. In parallel, clinicians assessed intra-cluster similarities and inter-cluster differences of the identified patient subtypes within the context of their clinical knowledge. By confronting the outputs of both automatic and clinician-based explanations, we aim to highlight the mutual benefit of combining machine learning techniques with clinical expertise.

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arXiv2022

Understanding the properties and limitations of contrastive learning for Out-of-Distribution detection

A recent popular approach to out-of-distribution (OOD) detection is based on a self-supervised learning technique referred to as contrastive learning. There are two main variants of contrastive learning, namely instance and class discrimination, targeting features that can discriminate between different instances for the former, and different classes for the latter. In this paper, we aim to understand the effectiveness and limitation of existing contrastive learning methods for OOD detection. We approach this in 3 ways. First, we systematically study the performance difference between the instance discrimination and supervised contrastive learning variants in different OOD detection settings. Second, we study which in-distribution (ID) classes OOD data tend to be classified into. Finally, we study the spectral decay property of the different contrastive learning approaches and examine how it correlates with OOD detection performance. In scenarios where the ID and OOD datasets are sufficiently different from one another, we see that instance discrimination, in the absence of fine-tuning, is competitive with supervised approaches in OOD detection. We see that OOD samples tend to be classified into classes that have a distribution similar to the distribution of the entire dataset. Furthermore, we show that contrastive learning learns a feature space that contains singular vectors containing several directions with a high variance which can be detrimental or beneficial to OOD detection depending on the inference approach used.

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arXiv2022

FAT Forensics: A Python Toolbox for Implementing and Deploying Fairness, Accountability and Transparency Algorithms in Predictive Systems

Predictive systems, in particular machine learning algorithms, can take important, and sometimes legally binding, decisions about our everyday life. In most cases, however, these systems and decisions are neither regulated nor certified. Given the potential harm that these algorithms can cause, their qualities such as fairness, accountability and transparency (FAT) are of paramount importance. To ensure high-quality, fair, transparent and reliable predictive systems, we developed an open source Python package called FAT Forensics. It can inspect important fairness, accountability and transparency aspects of predictive algorithms to automatically and objectively report them back to engineers and users of such systems. Our toolbox can evaluate all elements of a predictive pipeline: data (and their features), models and predictions. Published under the BSD 3-Clause open source licence, FAT Forensics is opened up for personal and commercial usage.

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arXiv2022

What and How of Machine Learning Transparency: Building Bespoke Explainability Tools with Interoperable Algorithmic Components

Explainability techniques for data-driven predictive models based on artificial intelligence and machine learning algorithms allow us to better understand the operation of such systems and help to hold them accountable. New transparency approaches are developed at breakneck speed, enabling us to peek inside these black boxes and interpret their decisions. Many of these techniques are introduced as monolithic tools, giving the impression of one-size-fits-all and end-to-end algorithms with limited customisability. Nevertheless, such approaches are often composed of multiple interchangeable modules that need to be tuned to the problem at hand to produce meaningful explanations. This paper introduces a collection of hands-on training materials -- slides, video recordings and Jupyter Notebooks -- that provide guidance through the process of building and evaluating bespoke modular surrogate explainers for tabular data. These resources cover the three core building blocks of this technique: interpretable representation composition, data sampling and explanation generation.

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arXiv2022

FAT Forensics: A Python Toolbox for Algorithmic Fairness, Accountability and Transparency

Today, artificial intelligence systems driven by machine learning algorithms can be in a position to take important, and sometimes legally binding, decisions about our everyday lives. In many cases, however, these systems and their actions are neither regulated nor certified. To help counter the potential harm that such algorithms can cause we developed an open source toolbox that can analyse selected fairness, accountability and transparency aspects of the machine learning process: data (and their features), models and predictions, allowing to automatically and objectively report them to relevant stakeholders. In this paper we describe the design, scope, usage and impact of this Python package, which is published under the 3-Clause BSD open source licence.

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arXiv2022

Self-Supervised Multimodal Fusion Transformer for Passive Activity Recognition

The pervasiveness of Wi-Fi signals provides significant opportunities for human sensing and activity recognition in fields such as healthcare. The sensors most commonly used for passive Wi-Fi sensing are based on passive Wi-Fi radar (PWR) and channel state information (CSI) data, however current systems do not effectively exploit the information acquired through multiple sensors to recognise the different activities. In this paper, we explore new properties of the Transformer architecture for multimodal sensor fusion. We study different signal processing techniques to extract multiple image-based features from PWR and CSI data such as spectrograms, scalograms and Markov transition field (MTF). We first propose the Fusion Transformer, an attention-based model for multimodal and multi-sensor fusion. Experimental results show that our Fusion Transformer approach can achieve competitive results compared to a ResNet architecture but with much fewer resources. To further improve our model, we propose a simple and effective framework for multimodal and multi-sensor self-supervised learning (SSL). The self-supervised Fusion Transformer outperforms the baselines, achieving a F1-score of 95.9%. Finally, we show how this approach significantly outperforms the others when trained with as little as 1% (2 minutes) of labelled training data to 20% (40 minutes) of labelled training data.

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arXiv2022

The Weak Supervision Landscape

Many ways of annotating a dataset for machine learning classification tasks that go beyond the usual class labels exist in practice. These are of interest as they can simplify or facilitate the collection of annotations, while not greatly affecting the resulting machine learning model. Many of these fall under the umbrella term of weak labels or annotations. However, it is not always clear how different alternatives are related. In this paper we propose a framework for categorising weak supervision settings with the aim of: (1) helping the dataset owner or annotator navigate through the available options within weak supervision when prescribing an annotation process, and (2) describing existing annotations for a dataset to machine learning practitioners so that we allow them to understand the implications for the learning process. To this end, we identify the key elements that characterise weak supervision and devise a series of dimensions that categorise most of the existing approaches. We show how common settings in the literature fit within the framework and discuss its possible uses in practice.

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arXiv2022

On the relation between statistical learning and perceptual distances

It has been demonstrated many times that the behavior of the human visual system is connected to the statistics of natural images. Since machine learning relies on the statistics of training data as well, the above connection has interesting implications when using perceptual distances (which mimic the behavior of the human visual system) as a loss function. In this paper, we aim to unravel the non-trivial relationships between the probability distribution of the data, perceptual distances, and unsupervised machine learning. To this end, we show that perceptual sensitivity is correlated with the probability of an image in its close neighborhood. We also explore the relation between distances induced by autoencoders and the probability distribution of the training data, as well as how these induced distances are correlated with human perception. Finally, we find perceptual distances do not always lead to noticeable gains in performance over Euclidean distance in common image processing tasks, except when data is scarce and the perceptual distance provides regularization. We propose this may be due to a \emph{double-counting} effect of the image statistics, once in the perceptual distance and once in the training procedure.

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arXiv2021

Uncertainty Quantification of Surrogate Explanations: an Ordinal Consensus Approach

Explainability of black-box machine learning models is crucial, in particular when deployed in critical applications such as medicine or autonomous cars. Existing approaches produce explanations for the predictions of models, however, how to assess the quality and reliability of such explanations remains an open question. In this paper we take a step further in order to provide the practitioner with tools to judge the trustworthiness of an explanation. To this end, we produce estimates of the uncertainty of a given explanation by measuring the ordinal consensus amongst a set of diverse bootstrapped surrogate explainers. While we encourage diversity by using ensemble techniques, we propose and analyse metrics to aggregate the information contained within the set of explainers through a rating scheme. We empirically illustrate the properties of this approach through experiments on state-of-the-art Convolutional Neural Network ensembles. Furthermore, through tailored visualisations, we show specific examples of situations where uncertainty estimates offer concrete actionable insights to the user beyond those arising from standard surrogate explainers.

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arXiv2021

Reinforcement Learning with Feedback from Multiple Humans with Diverse Skills

A promising approach to improve the robustness and exploration in Reinforcement Learning is collecting human feedback and that way incorporating prior knowledge of the target environment. It is, however, often too expensive to obtain enough feedback of good quality. To mitigate the issue, we aim to rely on a group of multiple experts (and non-experts) with different skill levels to generate enough feedback. Such feedback can therefore be inconsistent and infrequent. In this paper, we build upon prior work -- Advise, a Bayesian approach attempting to maximise the information gained from human feedback -- extending the algorithm to accept feedback from this larger group of humans, the trainers, while also estimating each trainer's reliability. We show how aggregating feedback from multiple trainers improves the total feedback's accuracy and make the collection process easier in two ways. Firstly, this approach addresses the case of some of the trainers being adversarial. Secondly, having access to the information about each trainer reliability provides a second layer of robustness and offers valuable information for people managing the whole system to improve the overall trust in the system. It offers an actionable tool for improving the feedback collection process or modifying the reward function design if needed. We empirically show that our approach can accurately learn the reliability of each trainer correctly and use it to maximise the information gained from the multiple trainers' feedback, even if some of the sources are adversarial.

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arXiv2021

OPERAnet: A Multimodal Activity Recognition Dataset Acquired from Radio Frequency and Vision-based Sensors

This paper presents a comprehensive dataset intended to evaluate passive Human Activity Recognition (HAR) and localization techniques with measurements obtained from synchronized Radio-Frequency (RF) devices and vision-based sensors. The dataset consists of RF data including Channel State Information (CSI) extracted from a WiFi Network Interface Card (NIC), Passive WiFi Radar (PWR) built upon a Software Defined Radio (SDR) platform, and Ultra-Wideband (UWB) signals acquired via commercial off-the-shelf hardware. It also consists of vision/Infra-red based data acquired from Kinect sensors. Approximately 8 hours of annotated measurements are provided, which are collected across two rooms from 6 participants performing 6 daily activities. This dataset can be exploited to advance WiFi and vision-based HAR, for example, using pattern recognition, skeletal representation, deep learning algorithms or other novel approaches to accurately recognize human activities. Furthermore, it can potentially be used to passively track a human in an indoor environment. Such datasets are key tools required for the development of new algorithms and methods in the context of smart homes, elderly care, and surveillance applications.

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arXiv2021

Understanding surrogate explanations: the interplay between complexity, fidelity and coverage

This paper analyses the fundamental ingredients behind surrogate explanations to provide a better understanding of their inner workings. We start our exposition by considering global surrogates, describing the trade-off between complexity of the surrogate and fidelity to the black-box being modelled. We show that transitioning from global to local - reducing coverage - allows for more favourable conditions on the Pareto frontier of fidelity-complexity of a surrogate. We discuss the interplay between complexity, fidelity and coverage, and consider how different user needs can lead to problem formulations where these are either constraints or penalties. We also present experiments that demonstrate how the local surrogate interpretability procedure can be made interactive and lead to better explanations.

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arXiv2021

Explainers in the Wild: Making Surrogate Explainers Robust to Distortions through Perception

Explaining the decisions of models is becoming pervasive in the image processing domain, whether it is by using post-hoc methods or by creating inherently interpretable models. While the widespread use of surrogate explainers is a welcome addition to inspect and understand black-box models, assessing the robustness and reliability of the explanations is key for their success. Additionally, whilst existing work in the explainability field proposes various strategies to address this problem, the challenges of working with data in the wild is often overlooked. For instance, in image classification, distortions to images can not only affect the predictions assigned by the model, but also the explanation. Given a clean and a distorted version of an image, even if the prediction probabilities are similar, the explanation may still be different. In this paper we propose a methodology to evaluate the effect of distortions in explanations by embedding perceptual distances that tailor the neighbourhoods used to training surrogate explainers. We also show that by operating in this way, we can make the explanations more robust to distortions. We generate explanations for images in the Imagenet-C dataset and demonstrate how using a perceptual distances in the surrogate explainer creates more coherent explanations for the distorted and reference images.

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arXiv2021

On the overlooked issue of defining explanation objectives for local-surrogate explainers

Local surrogate approaches for explaining machine learning model predictions have appealing properties, such as being model-agnostic and flexible in their modelling. Several methods exist that fit this description and share this goal. However, despite their shared overall procedure, they set out different objectives, extract different information from the black-box, and consequently produce diverse explanations, that are -- in general -- incomparable. In this work we review the similarities and differences amongst multiple methods, with a particular focus on what information they extract from the model, as this has large impact on the output: the explanation. We discuss the implications of the lack of agreement, and clarity, amongst the methods' objectives on the research and practice of explainability.

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arXiv2021

Hypothesis Testing for Class-Conditional Label Noise

In this paper we provide machine learning practitioners with tools to answer the question: is there class-conditional noise in my labels? In particular, we present hypothesis tests to check whether a given dataset of instance-label pairs has been corrupted with class-conditional label noise, as opposed to uniform label noise, with the former biasing learning, while the latter -- under mild conditions -- does not. The outcome of these tests can then be used in conjunction with other information to assess further steps. While previous works explore the direct estimation of the noise rates, this is known to be hard in practice and does not offer a real understanding of how trustworthy the estimates are. These methods typically require anchor points -- examples whose true posterior is either 0 or 1. Differently, in this paper we assume we have access to a set of anchor points whose true posterior is approximately 1/2. The proposed hypothesis tests are built upon the asymptotic properties of Maximum Likelihood Estimators for Logistic Regression models. We establish the main properties of the tests, including a theoretical and empirical analysis of the dependence of the power on the test on the training sample size, the number of anchor points, the difference of the noise rates and the use of relaxed anchors.

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arXiv2021

Self-Supervised WiFi-Based Activity Recognition

Traditional approaches to activity recognition involve the use of wearable sensors or cameras in order to recognise human activities. In this work, we extract fine-grained physical layer information from WiFi devices for the purpose of passive activity recognition in indoor environments. While such data is ubiquitous, few approaches are designed to utilise large amounts of unlabelled WiFi data. We propose the use of self-supervised contrastive learning to improve activity recognition performance when using multiple views of the transmitted WiFi signal captured by different synchronised receivers. We conduct experiments where the transmitters and receivers are arranged in different physical layouts so as to cover both Line-of-Sight (LoS) and non LoS (NLoS) conditions. We compare the proposed contrastive learning system with non-contrastive systems and observe a 17.7% increase in macro averaged F1 score on the task of WiFi based activity recognition, as well as significant improvements in one- and few-shot learning scenarios.

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arXiv2021

Self-play Learning Strategies for Resource Assignment in Open-RAN Networks

Open Radio Access Network (ORAN) is being developed with an aim to democratise access and lower the cost of future mobile data networks, supporting network services with various QoS requirements, such as massive IoT and URLLC. In ORAN, network functionality is dis-aggregated into remote units (RUs), distributed units (DUs) and central units (CUs), which allows flexible software on Commercial-Off-The-Shelf (COTS) deployments. Furthermore, the mapping of variable RU requirements to local mobile edge computing centres for future centralized processing would significantly reduce the power consumption in cellular networks. In this paper, we study the RU-DU resource assignment problem in an ORAN system, modelled as a 2D bin packing problem. A deep reinforcement learning-based self-play approach is proposed to achieve efficient RU-DU resource management, with AlphaGo Zero inspired neural Monte-Carlo Tree Search (MCTS). Experiments on representative 2D bin packing environment and real sites data show that the self-play learning strategy achieves intelligent RU-DU resource assignment for different network conditions.

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