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Reimer Kuehn

Publications and source records attributed to Reimer Kuehn.

At least 19 recordsLinked to original sources

Gaussian Level-Set Percolation on Complex Networks

We present a solution of the problem of level-set percolation for multivariate Gaussians defined in terms of weighted graph Laplacians on complex networks. It is achieved using a cavity or message passing approach, which allows one to obtain the essential ingredient required for the solution, viz. a self-consistent determination of locally varying percolation probabilities. The cavity solution can be evaluated both for single large instances of locally tree-like graphs, and in the thermodynamic limit of random graphs of finite mean degree in the configuration model class. The critical level $h_c$ of the percolation transition is obtained through the condition that the largest eigenvalue of a weighted version $B$ of a non-backtracking matrix satisfies $\lambda_{\rm max}(B)|_{h_c} =1$. We present level-dependent distributions of local percolation probabilities for Erd\H{o}s-R\'enyi networks and and for networks with degree distributions described by power laws. We find that there is a strong correlation between marginal single-node variances of a massless multivariate Gaussian and local percolation probabilities at a given level $h$, which is nearly perfect at negative values $h$, but weakens as $h\nearrow 0$ for the system with power law degree distribution, and generally also for negative values of $h$, if the multivariate Gaussian acquires a non-zero mass. The theoretical analysis simplifies in the case of random regular graphs with uniform edge-weights of the weighted graph Laplacian of the system and uniform mass parameter of the Gaussian field. An asymptotic analysis reveals that for edge-weights $K=K(c)\equiv 1$ the critical percolation threshold $h_c$ decreases to 0, as the degree $c$ of the random regular graph diverges. For $K=K(c)=1/c$, on the other hand, the critical percolation threshold $h_c$ is shown to diverge as $c\to\infty$.

cond-mat.dis-nn

Level-Set Percolation of Gaussian Random Fields on Complex Networks

We provide an explicit solution of the problem of level-set percolation for multivariate Gaussians defined in terms of weighted graph Laplacians on complex networks. The solution requires an analysis of the heterogeneous micro-structure of the percolation problem, i.e., a self-consistent determination of locally varying percolation probabilities. This is achieved using a cavity or message passing approach. It can be evaluated, both for single large instances of locally tree-like graphs, and in the thermodynamic limit of random graphs of finite mean degree in the configuration model class.

cond-mat.dis-nn

Becoming Large, Becoming Infinite: The Anatomy of Thermal Physics and Phase Transitions in Finite Systems

This paper presents an in-depth analysis of the anatomy of both thermodynamics and statistical mechanics, together with the relationships between their constituent parts. Based on this analysis, using the renormalization group and finite-size scaling, we give a definition of a large but finite system and argue that phase transitions are represented correctly, as incipient singularities in such systems. We describe the role of the thermodynamic limit. And we explore the implications of this picture of critical phenomena for the questions of reduction and emergence.

cond-mat.stat-mech

The Fate of Articulation Points and Bredges in Percolation

We investigate the statistics of articulation points and bredges (bridge-edges) in complex networks in which bonds are randomly removed in a percolation process. Articulation points are nodes in a network which, if removed, would split the network component on which they are located into two or more separate components, while bredges are edges whose removal would split the network component on which they are located into two separate components. Both articulation points and bredges play an important role in processes of network dismantling and it is therefore useful to know the evolution of the probability of nodes or edges to be articulation points and bredges, respectively, when a fraction of edges is randomly removed from the network in a percolation process. Due to the heterogeneity of the network, the probability of a node to be an articulation point, or the probability of an edge to be a bredge will not be homogeneous across the network. We therefore analyze full distributions of articulation point probabilities as well as bredge probabilities, using a message-passing or cavity approach to the problem, as well as a deconvolution of these distributions according to degrees of the node or the degrees of both adjacent nodes in the case of bredges. Our methods allow us to obtain these distributions both for large single instances of networks as well as for ensembles of networks in the configuration model class in the thermodynamic limit of infinite system size. We also derive closed form expressions for the large mean degree limit of Erdős-Rényi networks.

cond-mat.dis-nn

Heterogeneity in Outcomes of Repeated Instances of Percolation Experiments

We investigate the heterogeneity of outcomes of repeated instances of percolation experiments in complex networks using a message passing approach to evaluate heterogeneous, node dependent probabilities of belonging to the giant or percolating cluster, i.e. the set of mutually connected nodes whose size scales linearly with the size of the system. We evaluate these both for large finite single instances, and for synthetic networks in the configuration model class in the thermodynamic limit. For the latter, we consider both Erdos-Renyi and scale free networks as examples of networks with narrow and broad degree distributions respectively. For real-world networks we use an undirected version of a Gnutella peer-to-peer file-sharing network with $N=62,568$ nodes as an example. We derive the theory for multiple instances of both uncorrelated and correlated percolation processes. For the uncorrelated case, we also obtain a closed form approximation for the large mean degree limit of Erdos-Renyi networks.

cond-mat.stat-mech

Top Eigenpair Statistics for Weighted Sparse Graphs

We develop a formalism to compute the statistics of the top eigenpair of weighted sparse graphs with finite mean connectivity and bounded maximal degree. Framing the problem in terms of optimisation of a quadratic form on the sphere and introducing a fictitious temperature, we employ the cavity and replica methods to find the solution in terms of self-consistent equations for auxiliary probability density functions, which can be solved by population dynamics. This derivation allows us to identify and unpack the individual contributions to the top eigenvector's components coming from nodes of degree $k$. The analytical results are in perfect agreement with numerical diagonalisation of large (weighted) adjacency matrices, and are further cross-checked on the cases of random regular graphs and sparse Markov transition matrices for unbiased random walks.

cond-mat.stat-mech

A Random Walk Perspective on Hide-and-Seek Games

We investigate hide-and-seek games on complex networks using a random walk framework. Specifically, we investigate the efficiency of various degree-biased random walk search strategies to locate items that are randomly hidden on a subset of vertices of a random graph. Vertices at which items are hidden in the network are chosen at random as well, though with probabilities that may depend on degree. We pitch various hide and seek strategies against each other, and determine the efficiency of search strategies by computing the average number of hidden items that a searcher will uncover in a random walk of $n$ steps. Our analysis is based on the cavity method for finite single instances of the problem, and generalises previous work of De Bacco et al. [1] so as to cover degree-biased random walks. We also extend the analysis to deal with the thermodynamic limit of infinite system size. We study a broad spectrum of functional forms for the degree bias of both the hiding and the search strategy and investigate the efficiency of families of search strategies for cases where their functional form is either matched or unmatched to that of the hiding strategy. Our results are in excellent agreement with those of numerical simulations. We propose two simple approximations for predicting efficient search strategies. One is based on an equilibrium analysis of the random walk search strategy. While not exact, it produces correct orders of magnitude for parameters characterising optimal search strategies. The second exploits the existence of an effective drift in random walks on networks, and is expected to be efficient in systems with low concentration of small degree nodes.

physics.soc-ph

A Structural Model for Fluctuations in Financial Markets

In this paper we provide a comprehensive analysis of a structural model for the dynamics of prices of assets traded in a market originally proposed in [1]. The model takes the form of an interacting generalization of the geometric Brownian motion model. It is formally equivalent to a model describing the stochastic dynamics of a system of analogue neurons, which is expected to exhibit glassy properties and thus many meta-stable states in a large portion of its parameter space. We perform a generating functional analysis, introducing a slow driving of the dynamics to mimic the effect of slowly varying macro-economic conditions. Distributions of asset returns over various time separations are evaluated analytically and are found to be fat-tailed in a manner broadly in line with empirical observations. Our model also allows to identify collective, interaction mediated properties of pricing distributions and it predicts pricing distributions which are significantly broader than their non-interacting counterparts, if interactions between prices in the model contain a ferro-magnetic bias. Using simulations, we are able to substantiate one of the main hypotheses underlying the original modelling, viz. that the phenomenon of volatility clustering can be rationalised in terms of an interplay between the dynamics within meta-stable states and the dynamics of occasional transitions between them.

q-fin.ST

Heterogeneous micro-structure of percolation in sparse networks

We examine the heterogeneous responses of individual nodes in sparse networks to the random removal of a fraction of edges. Using the message-passing formulation of percolation, we discover considerable variation across the network in the probability of a particular node to remain part of the giant component, and in the expected size of small clusters containing that node. In the vicinity of the percolation threshold, weakly non-linear analysis reveals that node-to-node heterogeneity is captured by the recently introduced notion of non-backtracking centrality. We supplement these results for fixed finite networks by a population dynamics approach to analyse random graph models in the infinite system size limit, also providing closed-form approximations for the large mean degree limit of Erdős-Rényi random graphs. Interpreted in terms of the application of percolation to real-world processes, our results shed light on the heterogeneous exposure of different nodes to cascading failures, epidemic spread, and information flow.

cond-mat.stat-mech

Optimal trading strategies - a time series approach

Motivated by recent advances in the spectral theory of auto-covariance matrices, we are led to revisit a reformulation of Markowitz' mean-variance portfolio optimization approach in the time domain. In its simplest incarnation it applies to a single traded asset and allows to find an optimal trading strategy which - for a given return - is minimally exposed to market price fluctuations. The model is initially investigated for a range of synthetic price processes, taken to be either second order stationary, or to exhibit second order stationary increments. Attention is paid to consequences of estimating auto-covariance matrices from small finite samples, and auto-covariance matrix cleaning strategies to mitigate against these are investigated. Finally we apply our framework to real world data.

q-fin.PM

Increased signaling entropy in cancer requires the scale-free property of protein interaction networks

One of the key characteristics of cancer cells is an increased phenotypic plasticity, driven by underlying genetic and epigenetic perturbations. However, at a systems-level it is unclear how these perturbations give rise to the observed increased plasticity. Elucidating such systems-level principles is key for an improved understanding of cancer. Recently, it has been shown that signaling entropy, an overall measure of signaling pathway promiscuity, and computable from integrating a sample's gene expression profile with a protein interaction network, correlates with phenotypic plasticity and is increased in cancer compared to normal tissue. Here we develop a computational framework for studying the effects of network perturbations on signaling entropy. We demonstrate that the increased signaling entropy of cancer is driven by two factors: (i) the scale-free (or near scale-free) topology of the interaction network, and (ii) a subtle positive correlation between differential gene expression and node connectivity. Indeed, we show that if protein interaction networks were random graphs, described by Poisson degree distributions, that cancer would generally not exhibit an increased signaling entropy. In summary, this work exposes a deep connection between cancer, signaling entropy and interaction network topology.

q-bio.MN

Spectra of Random Stochastic Matrices and Relaxation in Complex Systems

We compute spectra of large stochastic matrices $W$, defined on sparse random graphs, where edges $(i,j)$ of the graph are given positive random weights $W_{ij}>0$ in such a fashion that column sums are normalized to one. We compute spectra of such matrices both in the thermodynamic limit, and for single large instances. The structure of the graphs and the distribution of the non-zero edge weights $W_{ij}$ are largely arbitrary, as long as the mean vertex degree remains finite in the thermodynamic limit and the $W_{ij}$ satisfy a detailed balance condition. Knowing the spectra of stochastic matrices is tantamount to knowing the complete spectrum of relaxation times of stochastic processes described by them, so our results should have many interesting applications for the description of relaxation in complex systems. Our approach allows to disentangle contributions to the spectral density related to extended and localized states, respectively, allowing to differentiate between time-scales associated with transport processes and those associated with the dynamics of local rearrangements.

cond-mat.dis-nn

Signalling Entropy: a novel network-theoretical framework for systems analysis and interpretation of functional omic data

A key challenge in systems biology is the elucidation of the underlying principles, or fundamental laws, which determine the cellular phenotype. Understanding how these fundamental principles are altered in diseases like cancer is important for translating basic scientific knowledge into clinical advances. While significant progress is being made, with the identification of novel drug targets and treatments by means of systems biological methods, our fundamental systems level understanding of why certain treatments succeed and others fail is still lacking. We here advocate a novel methodological framework for systems analysis and interpretation of molecular omic data, which is based on statistical mechanical principles. Specifically, we propose the notion of cellular signalling entropy (or uncertainty), as a novel means of analysing and interpreting omic data, and more fundamentally, as a means of elucidating systems-level principles underlying basic biology and disease. We describe the power of signalling entropy to discriminate cells according to differentiation potential and cancer status. We further argue the case for an empirical cellular entropy-robustness correlation theorem and demonstrate its existence in cancer cell line drug sensitivity data. Specifically, we find that high signalling entropy correlates with drug resistance and further describe how entropy could be used to identify the achilles heels of cancer cells. In summary, signalling entropy is a deep and powerful concept, based on rigorous statistical mechanical principles, which, with improved data quality and coverage, will allow a much deeper understanding of the systems biological principles underlying normal and disease physiology.

q-bio.MN

Derivatives and Credit Contagion in Interconnected Networks

The importance of adequately modeling credit risk has once again been highlighted in the recent financial crisis. Defaults tend to cluster around times of economic stress due to poor macro-economic conditions, {\em but also} by directly triggering each other through contagion. Although credit default swaps have radically altered the dynamics of contagion for more than a decade, models quantifying their impact on systemic risk are still missing. Here, we examine contagion through credit default swaps in a stylized economic network of corporates and financial institutions. We analyse such a system using a stochastic setting, which allows us to exploit limit theorems to exactly solve the contagion dynamics for the entire system. Our analysis shows that, by creating additional contagion channels, CDS can actually lead to greater instability of the entire network in times of economic stress. This is particularly pronounced when CDS are used by banks to expand their loan books (arguing that CDS would offload the additional risks from their balance sheets). Thus, even with complete hedging through CDS, a significant loan book expansion can lead to considerably enhanced probabilities for the occurrence of very large losses and very high default rates in the system. Our approach adds a new dimension to research on credit contagion, and could feed into a rational underpinning of an improved regulatory framework for credit derivatives.

q-fin.RM

Spectra of Empirical Auto-Covariance Matrices

We compute spectra of sample auto-covariance matrices of second order stationary stochastic processes. We look at a limit in which both the matrix dimension $N$ and the sample size $M$ used to define empirical averages diverge, with their ratio $α=N/M$ kept fixed. We find a remarkable scaling relation which expresses the spectral density $ρ(λ)$ of sample auto-covariance matrices for processes with dynamical correlations as a continuous superposition of appropriately rescaled copies of the spectral density $ρ^{(0)}_α(λ)$ for a sequence of uncorrelated random variables. The rescaling factors are given by the Fourier transform $\hat C(q)$ of the auto-covariance function of the stochastic process. We also obtain a closed-form approximation for the scaling function $ρ^{(0)}_α(λ)$. This depends on the shape parameter $α$, but is otherwise universal: it is independent of the details of the underlying random variables, provided only they have finite variance. Our results are corroborated by numerical simulations using auto-regressive processes.

cond-mat.dis-nn

Spectra of Sparse Random Matrices

We compute the spectral density for ensembles of of sparse symmetric random matrices using replica, managing to circumvent difficulties that have been encountered in earlier approaches along the lines first suggested in a seminal paper by Rodgers and Bray. Due attention is payed to the issue of localization. Our approach is not restricted to matrices defined on graphs with Poissonian degree distribution. Matrices defined on regular random graphs or on scale-free graphs, are easily handled. We also look at matrices with row constraints such as discrete graph Laplacians. Our approach naturally allows to unfold the total density of states into contributions coming from vertices of different local coordination.

cond-mat.dis-nn

Finitely coordinated models for low-temperature phases of amorphous systems

We introduce models of heterogeneous systems with finite connectivity defined on random graphs to capture finite-coordination effects on the low-temperature behavior of finite dimensional systems. Our models use a description in terms of small deviations of particle coordinates from a set of reference positions, particularly appropriate for the description of low-temperature phenomena. A Born-von-Karman type expansion with random coefficients is used to model effects of frozen heterogeneities. The key quantity appearing in the theoretical description is a full distribution of effective single-site potentials which needs to be determined self-consistently. If microscopic interactions are harmonic, the effective single-site potentials turn out to be harmonic as well, and the distribution of these single-site potentials is equivalent to a distribution of localization lengths used earlier in the description of chemical gels. For structural glasses characterized by frustration and anharmonicities in the microscopic interactions, the distribution of single-site potentials involves anharmonicities of all orders, and both single-well and double well potentials are observed, the latter with a broad spectrum of barrier heights. The appearance of glassy phases at low temperatures is marked by the appearance of asymmetries in the distribution of single-site potentials, as previously observed for fully connected systems. Double-well potentials with a broad spectrum of barrier heights and asymmetries would give rise to the well known universal glassy low temperature anomalies when quantum effects are taken into account.

cond-mat.dis-nn