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Rensu P. Theart

Publications and source records attributed to Rensu P. Theart.

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How well do routinely collected demographic and clinical variables aid point-of-care lung ultrasound TB classification

We consider the fusion of lung ultrasound images with routinely-collected clinical and demographic data for the purpose of automated tuberculosis (TB) screening using deep-learning. Such deep-learning based screening tools for TB could meaningfully support the health care system in Africa, where the burden of disease is severe and resources are constrained. Beginning with an established ResNet baseline for classification of lung ultrasound images, which achieves an area under the receiver operating characteristic (AUROC) curve of 0.91 [0.86,0.96] (95% CI), we consider the incorporation of the clinical and demographic data using three fusion approaches. We find that a simple average-based fusion of the output scores of separately-trained image and clinical data classifiers consistently matches or outperforms a more complex approach where the data is fused earlier and a combined classifier is trained. Fusing the image and the clinical classifiers in this way leads to a classifier with an overall AUROC of 0.95 [0.91,0.99] (specificity of 0.76 at sensitivity 0.93) which is an improvement of 4% absolute over the image-only baseline. We also find that greedy feature selection can be used to reduce the number of clinical and demographic inputs without sacrificing classification performance. Finally, when we differentiate between clinical and demographic data that are self-reported, that require some basic measurement or calculation, and that require a point-of-care (POC) test, we find the inclusion of the POC tests included in this study to be of minimal benefit to classification performance. We conclude that the incorporation of routinely-collected clinical and demographic data is a promising way to improve the performance of lung ultrasound based automatic classification.

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Wrong Organ, Right Physics: Transferring Echocardiography Pretraining to Lung Ultrasound for Tuberculosis Screening

Lung ultrasound (LUS) is attractive for tuberculosis (TB) screening at primary-care level, but labelled cohorts are small. Echocardiography carries no such constraint, while sharing the same underlying ultrasound imaging physics, signal processing and B-mode appearance as LUS. We ask whether an encoder pretrained on that high-resource ultrasound domain carries representations that remain usable in the low-resource one. Only the encoder varies, across seventeen encoders spanning three architecture families. Among them, a latent-predictive video encoder pretrained on generic video (V-JEPA2-L) and its echocardiography counterpart (EchoJEPA-L) differ in pretraining corpus alone. The choice among these encoders does not resolve the classification, the whole family spanning 2.50 percentage points against a measurement resolution of 2.71. What moves the task instead is feature conditioning. Standardising the features between the encoder and the classifier improves all seventeen encoders by a mean of +1.23 percentage points at $p=1.5\times10^{-5}$. On the held-out test set every encoder selected on the development folds stands above the baseline system by up to +2.57 percentage points of area under the receiver operating characteristic curve (AUROC), and specificity at 90% sensitivity reaches 79.3% against 60.3%. The contrast specified in advance, EchoJEPA-L against V-JEPA2-L, measures -0.16 percentage points at $p=0.926$. We therefore find no evidence that shared ultrasonic physics alone makes echocardiography a more productive pretraining corpus than generic video, and any advantage, if present, is smaller than this cohort can resolve. The video encoders receive replicated still images, however, so whether this absence of an effect reflects the pretraining domain or a video encoder applied to static frames cannot be separated. The limiting factor is the labelled cohort rather than the encoder.

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