arXiv subjects

Ricardo Henao

Publications and source records attributed to Ricardo Henao.

At least 73 records · Page 4Linked to original sources

arXiv2018

Improved Semantic-Aware Network Embedding with Fine-Grained Word Alignment

Network embeddings, which learn low-dimensional representations for each vertex in a large-scale network, have received considerable attention in recent years. For a wide range of applications, vertices in a network are typically accompanied by rich textual information such as user profiles, paper abstracts, etc. We propose to incorporate semantic features into network embeddings by matching important words between text sequences for all pairs of vertices. We introduce a word-by-word alignment framework that measures the compatibility of embeddings between word pairs, and then adaptively accumulates these alignment features with a simple yet effective aggregation function. In experiments, we evaluate the proposed framework on three real-world benchmarks for downstream tasks, including link prediction and multi-label vertex classification. Results demonstrate that our model outperforms state-of-the-art network embedding methods by a large margin.

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arXiv2018

Multi-Label Learning from Medical Plain Text with Convolutional Residual Models

Predicting diagnoses from Electronic Health Records (EHRs) is an important medical application of multi-label learning. We propose a convolutional residual model for multi-label classification from doctor notes in EHR data. A given patient may have multiple diagnoses, and therefore multi-label learning is required. We employ a Convolutional Neural Network (CNN) to encode plain text into a fixed-length sentence embedding vector. Since diagnoses are typically correlated, a deep residual network is employed on top of the CNN encoder, to capture label (diagnosis) dependencies and incorporate information directly from the encoded sentence vector. A real EHR dataset is considered, and we compare the proposed model with several well-known baselines, to predict diagnoses based on doctor notes. Experimental results demonstrate the superiority of the proposed convolutional residual model.

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arXiv2018

Hierarchical infinite factor model for improving the prediction of surgical complications for geriatric patients

We develop a hierarchical infinite latent factor model (HIFM) to appropriately account for the covariance structure across subpopulations in data. We propose a novel Hierarchical Dirichlet Process shrinkage prior on the loadings matrix that flexibly captures the underlying structure of our data across subpopulations while sharing information to improve inference and prediction. The stick-breaking construction of the prior assumes infinite number of factors and allows for each subpopulation to utilize different subsets of the factor space and select the number of factors needed to best explain the variation. Theoretical results are provided to show support of the prior. We develop the model into a latent factor regression method that excels at prediction and inference of regression coefficients. Simulations are used to validate this strong performance compared to baseline methods. We apply this work to the problem of predicting surgical complications using electronic health record data for geriatric patients at Duke University Health System (DUHS). We utilize additional surgical encounters at DUHS to enhance learning for the targeted patients. Using HIFM to identify high risk patients improves the sensitivity of predicting death to 91% from 35% based on the currently used heuristic.

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arXiv2018

JointGAN: Multi-Domain Joint Distribution Learning with Generative Adversarial Nets

A new generative adversarial network is developed for joint distribution matching. Distinct from most existing approaches, that only learn conditional distributions, the proposed model aims to learn a joint distribution of multiple random variables (domains). This is achieved by learning to sample from conditional distributions between the domains, while simultaneously learning to sample from the marginals of each individual domain. The proposed framework consists of multiple generators and a single softmax-based critic, all jointly trained via adversarial learning. From a simple noise source, the proposed framework allows synthesis of draws from the marginals, conditional draws given observations from a subset of random variables, or complete draws from the full joint distribution. Most examples considered are for joint analysis of two domains, with examples for three domains also presented.

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arXiv2018

Adversarial Time-to-Event Modeling

Modern health data science applications leverage abundant molecular and electronic health data, providing opportunities for machine learning to build statistical models to support clinical practice. Time-to-event analysis, also called survival analysis, stands as one of the most representative examples of such statistical models. We present a deep-network-based approach that leverages adversarial learning to address a key challenge in modern time-to-event modeling: nonparametric estimation of event-time distributions. We also introduce a principled cost function to exploit information from censored events (events that occur subsequent to the observation window). Unlike most time-to-event models, we focus on the estimation of time-to-event distributions, rather than time ordering. We validate our model on both benchmark and real datasets, demonstrating that the proposed formulation yields significant performance gains relative to a parametric alternative, which we also propose.

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arXiv2018

Baseline Needs More Love: On Simple Word-Embedding-Based Models and Associated Pooling Mechanisms

Many deep learning architectures have been proposed to model the compositionality in text sequences, requiring a substantial number of parameters and expensive computations. However, there has not been a rigorous evaluation regarding the added value of sophisticated compositional functions. In this paper, we conduct a point-by-point comparative study between Simple Word-Embedding-based Models (SWEMs), consisting of parameter-free pooling operations, relative to word-embedding-based RNN/CNN models. Surprisingly, SWEMs exhibit comparable or even superior performance in the majority of cases considered. Based upon this understanding, we propose two additional pooling strategies over learned word embeddings: (i) a max-pooling operation for improved interpretability; and (ii) a hierarchical pooling operation, which preserves spatial (n-gram) information within text sequences. We present experiments on 17 datasets encompassing three tasks: (i) (long) document classification; (ii) text sequence matching; and (iii) short text tasks, including classification and tagging. The source code and datasets can be obtained from https:// github.com/dinghanshen/SWEM.

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arXiv2018

NASH: Toward End-to-End Neural Architecture for Generative Semantic Hashing

Semantic hashing has become a powerful paradigm for fast similarity search in many information retrieval systems. While fairly successful, previous techniques generally require two-stage training, and the binary constraints are handled ad-hoc. In this paper, we present an end-to-end Neural Architecture for Semantic Hashing (NASH), where the binary hashing codes are treated as Bernoulli latent variables. A neural variational inference framework is proposed for training, where gradients are directly back-propagated through the discrete latent variable to optimize the hash function. We also draw connections between proposed method and rate-distortion theory, which provides a theoretical foundation for the effectiveness of the proposed framework. Experimental results on three public datasets demonstrate that our method significantly outperforms several state-of-the-art models on both unsupervised and supervised scenarios.

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arXiv2018

Joint Embedding of Words and Labels for Text Classification

Word embeddings are effective intermediate representations for capturing semantic regularities between words, when learning the representations of text sequences. We propose to view text classification as a label-word joint embedding problem: each label is embedded in the same space with the word vectors. We introduce an attention framework that measures the compatibility of embeddings between text sequences and labels. The attention is learned on a training set of labeled samples to ensure that, given a text sequence, the relevant words are weighted higher than the irrelevant ones. Our method maintains the interpretability of word embeddings, and enjoys a built-in ability to leverage alternative sources of information, in addition to input text sequences. Extensive results on the several large text datasets show that the proposed framework outperforms the state-of-the-art methods by a large margin, in terms of both accuracy and speed.

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arXiv2018

Towards Unifying Hamiltonian Monte Carlo and Slice Sampling

We unify slice sampling and Hamiltonian Monte Carlo (HMC) sampling, demonstrating their connection via the Hamiltonian-Jacobi equation from Hamiltonian mechanics. This insight enables extension of HMC and slice sampling to a broader family of samplers, called Monomial Gamma Samplers (MGS). We provide a theoretical analysis of the mixing performance of such samplers, proving that in the limit of a single parameter, the MGS draws decorrelated samples from the desired target distribution. We further show that as this parameter tends toward this limit, performance gains are achieved at a cost of increasing numerical difficulty and some practical convergence issues. Our theoretical results are validated with synthetic data and real-world applications.

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arXiv2018

Stochastic Gradient Monomial Gamma Sampler

Recent advances in stochastic gradient techniques have made it possible to estimate posterior distributions from large datasets via Markov Chain Monte Carlo (MCMC). However, when the target posterior is multimodal, mixing performance is often poor. This results in inadequate exploration of the posterior distribution. A framework is proposed to improve the sampling efficiency of stochastic gradient MCMC, based on Hamiltonian Monte Carlo. A generalized kinetic function is leveraged, delivering superior stationary mixing, especially for multimodal distributions. Techniques are also discussed to overcome the practical issues introduced by this generalization. It is shown that the proposed approach is better at exploring complex multimodal posterior distributions, as demonstrated on multiple applications and in comparison with other stochastic gradient MCMC methods.

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arXiv2017

Deconvolutional Latent-Variable Model for Text Sequence Matching

A latent-variable model is introduced for text matching, inferring sentence representations by jointly optimizing generative and discriminative objectives. To alleviate typical optimization challenges in latent-variable models for text, we employ deconvolutional networks as the sequence decoder (generator), providing learned latent codes with more semantic information and better generalization. Our model, trained in an unsupervised manner, yields stronger empirical predictive performance than a decoder based on Long Short-Term Memory (LSTM), with less parameters and considerably faster training. Further, we apply it to text sequence-matching problems. The proposed model significantly outperforms several strong sentence-encoding baselines, especially in the semi-supervised setting.

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arXiv2017

Adversarial Feature Matching for Text Generation

The Generative Adversarial Network (GAN) has achieved great success in generating realistic (real-valued) synthetic data. However, convergence issues and difficulties dealing with discrete data hinder the applicability of GAN to text. We propose a framework for generating realistic text via adversarial training. We employ a long short-term memory network as generator, and a convolutional network as discriminator. Instead of using the standard objective of GAN, we propose matching the high-dimensional latent feature distributions of real and synthetic sentences, via a kernelized discrepancy metric. This eases adversarial training by alleviating the mode-collapsing problem. Our experiments show superior performance in quantitative evaluation, and demonstrate that our model can generate realistic-looking sentences.

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arXiv2017

Adversarial Symmetric Variational Autoencoder

A new form of variational autoencoder (VAE) is developed, in which the joint distribution of data and codes is considered in two (symmetric) forms: ($i$) from observed data fed through the encoder to yield codes, and ($ii$) from latent codes drawn from a simple prior and propagated through the decoder to manifest data. Lower bounds are learned for marginal log-likelihood fits observed data and latent codes. When learning with the variational bound, one seeks to minimize the symmetric Kullback-Leibler divergence of joint density functions from ($i$) and ($ii$), while simultaneously seeking to maximize the two marginal log-likelihoods. To facilitate learning, a new form of adversarial training is developed. An extensive set of experiments is performed, in which we demonstrate state-of-the-art data reconstruction and generation on several image benchmark datasets.

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arXiv2017

VAE Learning via Stein Variational Gradient Descent

A new method for learning variational autoencoders (VAEs) is developed, based on Stein variational gradient descent. A key advantage of this approach is that one need not make parametric assumptions about the form of the encoder distribution. Performance is further enhanced by integrating the proposed encoder with importance sampling. Excellent performance is demonstrated across multiple unsupervised and semi-supervised problems, including semi-supervised analysis of the ImageNet data, demonstrating the scalability of the model to large datasets.

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arXiv2017

ALICE: Towards Understanding Adversarial Learning for Joint Distribution Matching

We investigate the non-identifiability issues associated with bidirectional adversarial training for joint distribution matching. Within a framework of conditional entropy, we propose both adversarial and non-adversarial approaches to learn desirable matched joint distributions for unsupervised and supervised tasks. We unify a broad family of adversarial models as joint distribution matching problems. Our approach stabilizes learning of unsupervised bidirectional adversarial learning methods. Further, we introduce an extension for semi-supervised learning tasks. Theoretical results are validated in synthetic data and real-world applications.

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arXiv2017

Deconvolutional Paragraph Representation Learning

Learning latent representations from long text sequences is an important first step in many natural language processing applications. Recurrent Neural Networks (RNNs) have become a cornerstone for this challenging task. However, the quality of sentences during RNN-based decoding (reconstruction) decreases with the length of the text. We propose a sequence-to-sequence, purely convolutional and deconvolutional autoencoding framework that is free of the above issue, while also being computationally efficient. The proposed method is simple, easy to implement and can be leveraged as a building block for many applications. We show empirically that compared to RNNs, our framework is better at reconstructing and correcting long paragraphs. Quantitative evaluation on semi-supervised text classification and summarization tasks demonstrate the potential for better utilization of long unlabeled text data.

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arXiv2017

Learning Generic Sentence Representations Using Convolutional Neural Networks

We propose a new encoder-decoder approach to learn distributed sentence representations that are applicable to multiple purposes. The model is learned by using a convolutional neural network as an encoder to map an input sentence into a continuous vector, and using a long short-term memory recurrent neural network as a decoder. Several tasks are considered, including sentence reconstruction and future sentence prediction. Further, a hierarchical encoder-decoder model is proposed to encode a sentence to predict multiple future sentences. By training our models on a large collection of novels, we obtain a highly generic convolutional sentence encoder that performs well in practice. Experimental results on several benchmark datasets, and across a broad range of applications, demonstrate the superiority of the proposed model over competing methods.

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arXiv2016

Transfer Learning via Latent Factor Modeling to Improve Prediction of Surgical Complications

We aim to create a framework for transfer learning using latent factor models to learn the dependence structure between a larger source dataset and a target dataset. The methodology is motivated by our goal of building a risk-assessment model for surgery patients, using both institutional and national surgical outcomes data. The national surgical outcomes data is collected through NSQIP (National Surgery Quality Improvement Program), a database housing almost 4 million patients from over 700 different hospitals. We build a latent factor model with a hierarchical prior on the loadings matrix to appropriately account for the different covariance structure in our data. We extend this model to handle more complex relationships between the populations by deriving a scale mixture formulation using stick-breaking properties. Our model provides a transfer learning framework that utilizes all information from both the source and target data, while modeling the underlying inherent differences between them.

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