arXiv subjects

Ricardo Martinez-Garcia

Publications and source records attributed to Ricardo Martinez-Garcia.

33 records · Page 2Linked to original sources

arXiv2021

Enhanced species coexistence in Lotka-Volterra competition models due to nonlocal interactions

We introduce and analyze a spatial Lotka-Volterra competition model with local and nonlocal interactions. We study two alternative classes of nonlocal competition that differ in how each species' characteristics determine the range of the nonlocal interactions. In both cases, nonlocal interactions can create spatial patterns of population densities in which highly populated clumps alternate with unpopulated regions. This non-populated regions provide spatial niches for a weaker competitor to establish in the community and persist in conditions in which local models predict competitive exclusion. Moreover, depending on the balance between local and nonlocal competition intensity, the clumps of the weaker competitor vary from M-like structures with higher densities of individuals accumulating at the edges of each clump to triangular structures with most individuals occupying their centers. These results suggest that long-range competition, through the creation of spatial patterns in population densities, might be an important driving force behind the rich diversity of species observed in real ecological communities.

q-bio.PE↗

arXiv2021

Species exclusion and coexistence in a noisy voter model with a competition-colonization tradeoff

We introduce an asymmetric noisy voter model to study the joint effect of immigration and a competition-dispersal tradeoff in the dynamics of two species competing for space in regular lattices. Individuals of one species can invade a nearest-neighbor site in the lattice, while individuals of the other species are able to invade sites at any distance but are less competitive locally, i.e., they establish with a probability $g \le 1$. The model also accounts for immigration, modeled as an external noise that may spontaneously replace an individual at a lattice site by another individual of the other species. This combination of mechanisms gives rise to a rich variety of outcomes for species competition, including exclusion of either species, mono-stable coexistence of both species at different population proportions, and bi-stable coexistence with proportions of populations that depend on the initial condition. Remarkably, in the bi-stable phase, the system undergoes a discontinuous transition as the intensity of immigration overcomes a threshold, leading to a half loop dynamics associated to a cusp catastrophe, which causes the irreversible loss of the species with the shortest dispersal range.

q-bio.PE↗

arXiv2019

How range residency and long-range perception change encounter rates

Encounter rates link movement strategies to intra- and inter-specific interactions, and therefore translate individual movement behavior into higher-level ecological processes. Indeed, a large body of interacting population theory rests on the law of mass action, which can be derived from assumptions of Brownian motion in an enclosed container with exclusively local perception. These assumptions imply completely uniform space use, individual home ranges equivalent to the population range, and encounter dependent on movement paths actually crossing. Mounting empirical evidence, however, suggests that animals use space non-uniformly, occupy home ranges substantially smaller than the population range, and are often capable of nonlocal perception. Here, we explore how these empirically supported behaviors change pairwise encounter rates. Specifically, we derive novel analytical expressions for encounter rates under Ornstein-Uhlenbeck motion, which features non-uniform space use and allows individual home ranges to differ from the population range. We compare OU-based encounter predictions to those of Reflected Brownian Motion, from which the law of mass action can be derived. For both models, we further explore how the interplay between the scale of perception and home range size affects encounter rates. We find that neglecting realistic movement and perceptual behaviors can systematically bias encounter rate predictions.

q-bio.PE↗

arXiv2018

Cell adhesion and fluid flow jointly initiate genotype spatial distribution in biofilms

Biofilms are microbial collectives that occupy a diverse array of surfaces. The function and evolution of biofilms are strongly influenced by the spatial arrangement of different strains and species within them, but how spatiotemporal distributions of different genotypes in biofilm populations originate is still underexplored. Here, we study the origins of biofilm genetic structure by combining model development, numerical simulations, and microfluidic experiments using the human pathogen Vibrio cholerae. Using spatial correlation functions to quantify the differences between emergent cell lineage segregation patterns, we find that strong adhesion often, but not always, maximizes the size of clonal cell clusters on flat surfaces. Counterintuitively, our model predicts that, under some conditions, investing in adhesion can reduce rather than increase clonal group size. Our results emphasize that a complex interaction of fluid flow and cell adhesiveness can underlie emergent patterns of biofilm genetic structure. This structure, in turn, has an outsize influence on how biofilm-dwelling populations function and evolve.

q-bio.PE↗

arXiv2018

From scale-dependent feedbacks to long-range competition alone: a short review on pattern-forming mechanisms in arid ecosystems

Vegetation patterns are abundant in arid and semiarid ecosystems, but how they form remains unclear. One of the most extended theories lies in the existence of scale-dependent feedbacks (SDF) in plant-to-plant and plant-water interactions. Short distances are dominated by facilitative interactions, whereas competitive interactions dominate at larger scales. These feedbacks shape spatially inhomogeneous distributions of water that ultimately drive the emergence of patterns of vegetation. Even though the presence of facilitative and competitive interactions is clear, they are often hard to disentangle in the field, and therefore their relevance in vegetation pattern formation is still disputable. Here, we review the biological processes that have been proposed to explain pattern formation in arid ecosystems and how they have been implemented in mathematical models. We conclude by discussing the existence of similar structures in different biological and physical systems.

q-bio.PE↗

arXiv2017

Seasonality can induce coexistence of multiple bet-hedging strategies in Dictyostelium discoideum via storage effect

D. discoideum has been recently suggested as an example of bet-hedging. Upon starvation a population of unicellular amoebae splits between aggregators, which form a fruiting body made of a stalk and resistant spores, and non-aggregators. Spores are favored by long starvation periods, but vegetative cells can exploit resources in fast-recovering environments. This partition can be understood as a bet-hedging strategy that evolves in response to stochastic starvation times. A genotype is defined by a different balance between each type of cells. In this framework, if the ecological conditions are defined in terms of the mean starvation time (i.e. time between onset of starvation and the arrival of a new food pulse), a single genotype dominates each environment, which is inconsistent with the huge genetic diversity observed in nature. We investigate whether seasonality, represented by a periodic alternation in the mean starvation times, allows the coexistence of several strategies. We use a non-spatial (well-mixed) setting where different strains compete for a pulse of resources. We find that seasonality, which we model via two seasons, induces a temporal storage effect that can promote the stable coexistence of multiple genotypes. Two conditions need to be met. First, the distributions of starvation times in each season cannot overlap in order to create two well differentiated habitats within the year. Second, numerous growth-starvation cycles have to occur during each season to allow well-adapted strains to grow and survive the subsequent unfavorable period. Additional tradeoffs among life-history traits can expand the range of coexistence and increase the number of coexisting strategies, contributing towards explaining the genetic diversity observed in D. discoideum

q-bio.PE↗

arXiv2017

Nonequilibrium Statistical Physics in Ecology: Vegetation Patterns, Animal Mobility and Temporal Fluctuations

This thesis focuses on the applications of mathematical tools and concepts brought from nonequilibrium statistical physics to the modeling of ecological problems. The first part provides a short introduction where the theoretical concepts and mathematical tools that are going to be used in subsequent chapters are presented. Firstly, the different levels of description usually employed in the models are explained. Secondly, the mathematical relationships among them are presented. Finally, the notation and terminology that will be used later on are explained. The second part is devoted to studying vegetation pattern formation in regions where precipitations are not frequent and resources for plant growth are scarce. This part comprises two chapters. The third part of the thesis develops a series of mathematical models describing the collective movement and behavior of some animal species. Its primary objective is to investigate the effect that communication among foragers has on searching times and the formation of groups. It consists of two chapters. The fourth part covers the effect of stochastic temporal disorder, mimicking climate and environmental variability, on systems formed by many interacting particles. These models may serve as an example of ecosystems. The thesis ends with a summary and devising future research lines.

q-bio.PE↗

arXiv2016

Online games: a novel approach to explore how partial information influences human random searches

Many natural processes rely on optimizing the success ratio of a search process. We use an experimental setup consisting of a simple online game in which players have to find a target hidden on a board, to investigate the how the rounds are influenced by the detection of cues. We focus on the search duration and the statistics of the trajectories traced on the board. The experimental data are explained by a family of random-walk-based models and probabilistic analytical approximations. If no initial information is given to the players, the search is optimized for cues that cover an intermediate spatial scale. In addition, initial information about the extension of the cues results, in general, in faster searches. Finally, strategies used by informed players turn into non-stationary processes in which the length of each displacement evolves to show a well-defined characteristic scale that is not found in non-informed searches.

physics.bio-ph↗

arXiv2016

Lack of ecological context can create the illusion of social success in Dictyostelium discoideum

Studies of cooperation in microbes often focus on one fitness component, with little information about or attention to the ecological context, and this can lead to paradoxical results. The life cycle of the social amoeba Dictyostelium discoideum includes a multicellular stage in which not necessarily clonal amoebae aggregate upon starvation to form a possibly chimeric (genetically heterogeneous) fruiting body made of dead stalk and spores. The lab-measured reproductive skew in the spores of chimeras indicates strong social antagonism; this should result in low genotypic diversity, which is inconsistent with observations from nature. Two studies have suggested that this inconsistency stems from the one-dimensional assessment of fitness (spore production) and that the solution lies in tradeoffs between multiple traits, e.g.: spore size versus viability; and staying vegetative versus becoming dormant. We theoretically explore different tradeoff-implementing mechanisms and provide a unifying ecological framework in which the two tradeoffs above, as well as novel ones, arise collectively in response to characteristics of the environment. We find that spore production comes at the expense of vegetative cell production, time to development, and, depending on the experimental setup, spore size and viability. Furthermore, we find that all existing experimental results regarding chimeric mixes can be qualitatively recapitulated without needing to invoke social interactions, which allows for simple resolutions to previously paradoxical results. We conclude that the complexities of life histories, including social behavior and multicellularity, can only be understood in the appropriate multidimensional ecological context.

q-bio.PE↗

arXiv2015

Optimal recruitment strategies for groups of interacting walkers with leaders

We introduce a model of interacting random walkers on a finite one dimensional chain with absorbing boundaries or targets at the ends. Walkers are of two types: informed particles that move ballistically towards a given target, and diffusing uninformed particles that are biased towards close informed particles. This model mimics the dynamics of hierarchical groups of animals, where an informed individual tries to persuade and lead the movement of its conspecifics. We characterize the success of the persuasion by the first-passage probability of the uninformed particle to the target, and we interpret the speed of the informed particle as a strategic parameter that the particle tunes to maximize its success. We find that the success probability is non-monotonic, reaching its maximum at an intermediate speed whose value increases with the diffusing rate of the uninformed particle. When two different groups of informed leaders traveling in opposite directions compete, usually the largest group is the most successful. However, the minority can reverse this situation and become the most probable winner by following two different strategies: increasing its attraction strength or adjusting its speed to an optimal value relative to the majority's speed.

cond-mat.stat-mech↗

arXiv2014

Minimal mechanisms for vegetation patterns in semiarid regions

The minimal ecological requirements for formation of regular vegetation patterns in semiarid systems have been recently questioned. Against the general belief that a combination of facilitative and competitive interactions is necessary, recent theoretical studies suggest that, under broad conditions, nonlocal competition among plants alone may induce patterns. In this paper, we review results along this line, presenting a series of models that yield spatial patterns when finite-range competition is the only driving force. A preliminary derivation of this type of model from a more detailed one that considers water-biomass dynamics is also presented. Keywords: Vegetation patterns, nonlocal interactions

q-bio.PE↗

arXiv2014

Vegetation pattern formation in semiarid systems without facilitative mechanisms

Regular vegetation patterns in semiarid ecosystems are believed to arise from the interplay between long-range competition and facilitation processes acting at smaller distances. We show that, under rather general conditions, long-range competition alone may be enough to shape these patterns. To this end we propose a simple, general model for the dynamics of vegetation, which includes only long-range competition between plants. Competition is introduced through a nonlocal term, where the kernel function quantifies the intensity of the interaction. We recover the full spectrum of spatial structures typical of vegetation models that also account for facilitation in addition to competition.

q-bio.PE↗

arXiv2014

Spatial patterns in mesic savannas: the local facilitation limit and the role of demographic stochasticity

We propose a model equation for the dynamics of tree density in mesic savannas. It considers long-range competition among trees and the effect of fire acting as a local facilitation mechanism. Despite short-range facilitation is taken to the local-range limit, the standard full spectrum of spatial structures obtained in general vegetation models is recovered. Long-range competition is thus the key ingredient for the development of patterns. The long time coexistence between trees and grass, and how fires affect the survival of trees as well as the maintenance of the patterns is studied. The influence of demographic noise is analyzed. The stochastic system, under the parameter constraints typical of mesic savannas, shows irregular patterns characteristics of realistic situations. The coexistence of trees and grass still remains at reasonable noise intensities.

nlin.PS↗

arXiv2014

Optimal search in interacting populations:Gaussian jumps vs Levy flights

We investigated the relationships between search efficiency, movement strategy, and non-local communication in the biological context of animal foraging. We considered situations where the members of a population of foragers perform either Gaussian jumps or Levy flights, and show that the search time is minimized when communication among individuals occurs at intermediate ranges, independently of the type of movement. Additionally, while Brownian strategies are more strongly influenced by the communication mechanism, Levy flights still result in shorter overall search durations.

cond-mat.stat-mech↗

arXiv2012

Temporal disorder in up-down symmetric systems

The effect of temporal disorder on systems with up-down Z2 symmetry is studied. In particular, we analyze two well-known families of phase transitions: the Ising and the generalized voter universality classes, and scrutinize the consequences of placing them under fluctuating global conditions. We observe that variability of the control parameter induces in both classes "Temporal Griffiths Phases" (TGP). These recently-uncovered phases are analogous to standard Griffiths Phases appearing in systems with quenched spatial disorder, but where the roles of space and time are exchanged. TGPs are characterized by broad regions in parameter space in which (i) mean first-passage times scale algebraically with system size, and (ii) the system response (e.g. susceptibility) diverges. Our results confirm that TGPs are quite robust and ubiquitous in the presence of temporal disorder. Possible applications of our results to examples in ecology are discussed.

cond-mat.stat-mech↗