SearcharxivSearch

arXiv subjects

Robin Requadt

Publications and source records attributed to Robin Requadt.

3 recordsLinked to original sources

Inferring Cooperativity From Pooled Measurements

In many modern experiments, latent interactions drive multicomponent stochastic systems, yet the data are available only as pooled measurements that obscure these dependencies. Whether such interactions can be identified and inferred from aggregate signals remains largely unexplored. Motivated by multi-channel electrophysiological recordings, we address this problem by introducing sum-dependent Markov chains, a class of finite-state continuous-time multivariate Markov processes whose transition rates encode interactions through the aggregate state. Under natural structural conditions, we establish identifiability of the latent dynamic parameters from the aggregate process. We define a cooperativity index that distinguishes positive cooperativity, negative cooperativity and independence, and construct its consistent estimators. For discretely and noisily observed pooled data, we develop likelihood-based inference through a hidden Markov model, address the associated embedding problem, and prove consistency and asymptotic normality. We further propose a stepdown test for cooperativity with asymptotic size control and power guarantees. Simulations and real-data analyses, demonstrate the scope and effectiveness of the methodology.

stat.ME

Weak convergence of Bayes estimators under general loss functions

We investigate the asymptotic behavior of parametric Bayes estimators under a broad class of loss functions that extend beyond the classical translation-invariant setting. To this end, we develop a unified theoretical framework for loss functions exhibiting locally polynomial structure. This general theory encompasses important examples such as the squared Wasserstein distance, the Sinkhorn divergence and Stein discrepancies, which have gained prominence in modern statistical inference and machine learning. Building on the classical Bernstein--von Mises theorem, we establish sufficient conditions under which Bayes estimators inherit the posterior's asymptotic normality. As a by-product, we also derive conditions for the differentiability of Wasserstein-induced loss functions and provide new consistency results for Bayes estimators. Several examples and numerical experiments demonstrate the relevance and accuracy of the proposed methodology.

math.ST

Robust inference of cooperative behaviour of multiple ion channels in voltage-clamp recordings

Recent experimental studies have shed light on the intriguing possibility that ion channels exhibit cooperative behaviour. However, a comprehensive understanding of such cooperativity remains elusive, primarily due to limitations in measuring separately the response of each channel. Rather, only the superimposed channel response can be observed, challenging existing data analysis methods. To address this gap, we propose IDC (Idealisation, Discretisation, and Cooperativity inference), a robust statistical data analysis methodology that requires only voltage-clamp current recordings of an ensemble of ion channels. The framework of IDC enables us to integrate recent advancements in idealisation techniques and coupled Markov models. Further, in the cooperativity inference phase of IDC, we introduce a minimum distance estimator and establish its statistical guarantee in the form of asymptotic consistency. We demonstrate the effectiveness and robustness of IDC through extensive simulation studies. As an application, we investigate gramicidin D channels. Our findings reveal that these channels act independently, even at varying applied voltages during voltage-clamp experiments. An implementation of IDC is available from GitLab.

stat.ME