arXiv subjects

Roman Doronin

Publications and source records attributed to Roman Doronin.

4 recordsLinked to original sources

arXiv2026

Hunt Globally: Wide Search AI Agents for Drug Asset Scouting in Investing, Business Development, and Competitive Intelligence

Bio-pharmaceutical innovation has shifted: many new drug assets now originate outside the United States and are disclosed primarily via regional, non-English channels. Recent data suggests over 85% of patent filings originate outside the U.S., with China accounting for nearly half of the global total; a growing share of scholarly output is also non-U.S. Industry estimates put China at 30% of global drug development, spanning 1,200+ novel candidates. In this high-stakes environment, failing to surface "under-the-radar" assets creates multi-billion-dollar risk for investors and business development teams, making asset scouting a coverage-critical competition where speed and completeness drive value. Yet today's Deep Research AI agents still lag human experts in achieving high-recall discovery across heterogeneous, multilingual sources without hallucinations. We propose a benchmarking methodology for drug asset scouting and a tuned, tree-based self-learning Bioptic Agent aimed at complete, non-hallucinated scouting. We construct a challenging completeness benchmark using a multilingual multi-agent pipeline: complex user queries paired with ground-truth assets that are largely outside U.S.-centric radar. To reflect real deal complexity, we collected screening queries from expert investors, BD, and VC professionals, and used them as priors to conditionally generate benchmark queries. For grading, we use LLM-as-judge evaluation calibrated to expert opinions. On this benchmark, our Bioptic Agent achieves 79.7% F1 score, outperforming Gemini 3.1 Deep Think (59.2%), Gemini 3.1 Pro Deep Research (58.6%), Claude Opus 4.6 (56.2%), OpenAI GPT-5.2 Pro (46.6%), Perplexity Deep Research (44.2%), and Exa Websets (26.9%). Performance improves steeply with additional compute, supporting the view that more compute yields better results.

cs.AI↗

arXiv2025

LLM-Based Agents for Competitive Landscape Mapping in Drug Asset Due Diligence

In this paper, we describe and benchmark a competitor-discovery component used within an agentic AI system for fast drug asset due diligence. A competitor-discovery AI agent, given an indication, retrieves all drugs comprising the competitive landscape of that indication and extracts canonical attributes for these drugs. The competitor definition is investor-specific, and data is paywalled/licensed, fragmented across registries, ontology-mismatched by indication, alias-heavy for drug names, multimodal, and rapidly changing. Although considered the best tool for this problem, the current LLM-based AI systems aren't capable of reliably retrieving all competing drug names, and there is no accepted public benchmark for this task. To address the lack of evaluation, we use LLM-based agents to transform five years of multi-modal, unstructured diligence memos from a private biotech VC fund into a structured evaluation corpus mapping indications to competitor drugs with normalized attributes. We also introduce a competitor validating LLM-as-a-judge agent that filters out false positives from the list of predicted competitors to maximize precision and suppress hallucinations. On this benchmark, our competitor-discovery agent achieves 83% recall, exceeding OpenAI Deep Research (65%) and Perplexity Labs (60%). The system is deployed in production with enterprise users; in a case study with a biotech VC investment fund, analyst turnaround time dropped from 2.5 days to $\sim$3 hours ($\sim$20x) for the competitive analysis.

cs.AI↗

arXiv2025

Neural mechanisms of predictive processing: a collaborative community experiment through the OpenScope program

This review synthesizes advances in predictive processing within the sensory cortex. Predictive processing theorizes that the brain continuously predicts sensory inputs, refining neuronal responses by highlighting prediction errors. We identify key computational primitives, such as stimulus adaptation, dendritic computation, excitatory/inhibitory balance and hierarchical processing, as central to this framework. Our review highlights convergences, such as top-down inputs and inhibitory interneurons shaping mismatch signals, and divergences, including species-specific hierarchies and modality-dependent layer roles. To address these conflicts, we propose experiments in mice and primates using in-vivo two-photon imaging and electrophysiological recordings to test whether temporal, motor, and omission mismatch stimuli engage shared or distinct mechanisms. The resulting dataset, collected and shared via the OpenScope program, will enable model validation and community analysis, fostering iterative refinement and refutability to decode the neural circuits of predictive processing.

q-bio.NC↗

arXiv2022

Elucidating contact electrification mechanism of water

The open water surface is known to be charged. Yet, the magnitude of the charge and the physical mechanism of the charging remain unclear, causing heated debates across the scientific community. Here we directly measure the charge Q of microdrops ejected from hydrophilic and hydrophobic capillaries and show that the water surface can take both positive or negative charge values depending on pH and the capillary type. Our experiments, theory, and simulations provide evidence that a junction of two aqueous interfaces with a different ion adsorption energy (e.g., liquid-solid and liquid-air interfaces) develops a pH-dependent contact potential difference {\Delta}{\phi} up to 52 mV. The longitudinal charge transfer between the interfaces stimulated by {\Delta}{\phi} determines the charge of the open water surface. The suggested static electrification mechanism provides far-reaching insights into the origin of electrical potentials in biological and electrochemical energy systems.

cond-mat.soft↗