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Ronen Segev

Publications and source records attributed to Ronen Segev.

9 recordsLinked to original sources

Limits of optimal decoding under synaptic coarse-tuning

Sensory information propagates through successive processing stages in the brain, where synaptic weight patterns between stations determine how downstream neurons decode information from upstream populations. Although optimized synaptic connectivity can enhance information transmission, it requires precise weight tuning. Recent evidence depicting substantial synaptic volatility raises two fundamental questions: How does coarse-tuning of synaptic connectivity affect information transmission? What strategies could the nervous system employ to maintain reliable communication despite synaptic fluctuations? We addressed these questions by analyzing the signal-to-noise ratio ($SNR$) for binary stimulus discrimination under two decoding schemes: a naive population average and an optimized linear decoder. For the naive decoder, we found that $SNR$ remains largely insensitive to synaptic imprecision, since performance is already limited by correlated noise in neuronal responses. For the optimal decoder, we identified three distinct regimes. Under weak coarse-tuning, $SNR^2$ scales linearly with population size $N$. Under moderate coarse-tuning, scaling becomes sublinear. Under strong coarse-tuning, the regime most consistent with observed neuronal heterogeneity, $SNR$ saturates and can not be improved by recruiting larger populations. This limitation persists even when incorporating feedforward or recurrent network architectures. These findings suggest that in the biologically relevant regime of strong coarse-tuning, naive and optimal decoders can achieve qualitatively similar performance. The analysis shows that effective readout under synaptic volatility is constrained to an invariant low-dimensional manifold aligned with the naive decoder, potentially pointing to a fundamental principle for robust neural computation in the face of ongoing synaptic remodeling.

q-bio.NC

Retinal metric: a stimulus distance measure derived from population neural responses

The ability of the organism to distinguish between various stimuli is limited by the structure and noise in the population code of its sensory neurons. Here we infer a distance measure on the stimulus space directly from the recorded activity of 100 neurons in the salamander retina. In contrast to previously used measures of stimulus similarity, this "neural metric" tells us how distinguishable a pair of stimulus clips is to the retina, given the noise in the neural population response. We show that the retinal distance strongly deviates from Euclidean, or any static metric, yet has a simple structure: we identify the stimulus features that the neural population is jointly sensitive to, and show the SVM-like kernel function relating the stimulus and neural response spaces. We show that the non-Euclidean nature of the retinal distance has important consequences for neural decoding.

q-bio.NC

Stimulus-dependent maximum entropy models of neural population codes

Neural populations encode information about their stimulus in a collective fashion, by joint activity patterns of spiking and silence. A full account of this mapping from stimulus to neural activity is given by the conditional probability distribution over neural codewords given the sensory input. To be able to infer a model for this distribution from large-scale neural recordings, we introduce a stimulus-dependent maximum entropy (SDME) model---a minimal extension of the canonical linear-nonlinear model of a single neuron, to a pairwise-coupled neural population. The model is able to capture the single-cell response properties as well as the correlations in neural spiking due to shared stimulus and due to effective neuron-to-neuron connections. Here we show that in a population of 100 retinal ganglion cells in the salamander retina responding to temporal white-noise stimuli, dependencies between cells play an important encoding role. As a result, the SDME model gives a more accurate account of single cell responses and in particular outperforms uncoupled models in reproducing the distributions of codewords emitted in response to a stimulus. We show how the SDME model, in conjunction with static maximum entropy models of population vocabulary, can be used to estimate information-theoretic quantities like surprise and information transmission in a neural population.

q-bio.NC

Retinal adaptation and invariance to changes in higher-order stimulus statistics

Adaptation in the retina is thought to optimize the encoding of natural light signals into sequences of spikes sent to the brain. However, adaptation also entails computational costs: adaptive code is intrinsically ambiguous, because output symbols cannot be trivially mapped back to the stimuli without the knowledge of the adaptive state of the encoding neuron. It is thus important to learn which statistical changes in the input do, and which do not, invoke adaptive responses, and ask about the reasons for potential limits to adaptation. We measured the ganglion cell responses in the tiger salamander retina to controlled changes in the second (contrast), third (skew) and fourth (kurtosis) moments of the light intensity distribution of spatially uniform temporally independent stimuli. The skew and kurtosis of the stimuli were chosen to cover the range observed in natural scenes. We quantified adaptation in ganglion cells by studying two-dimensional linear-nonlinear models that capture well the retinal encoding properties across all stimuli. We found that the retinal ganglion cells adapt to contrast, but exhibit remarkably invariant behavior to changes in higher-order statistics. Finally, by theoretically analyzing optimal coding in LN-type models, we showed that the neural code can maintain a high information rate without dynamic adaptation despite changes in stimulus skew and kurtosis.

q-bio.NC

Synergy from Silence in a Combinatorial Neural Code

The manner in which groups of neurons represent events in the external world is fundamental to neuroscience. Here, we analyze the population code of the retina during naturalistic stimulation and show that the information conveyed by specific multi-neuronal firing patterns can be very different from the sum of the pattern's parts. Synchronous spikes convey more information than either of the participating cells, but almost always less than their sum, making them redundant coding symbols. Surprisingly, patterns of spiking and silence are mostly synergistic - carrying information that is accessible only by observing the whole pattern of activity, rather than its components, and signifying unique features in the stimulus. These results demonstrate that the retina uses a combinatorial code and that the brain can benefit significantly from recognizing multi-neuronal firing patterns.

q-bio.NC

Weak pairwise correlations imply strongly correlated network states in a neural population

Biological networks have so many possible states that exhaustive sampling is impossible. Successful analysis thus depends on simplifying hypotheses, but experiments on many systems hint that complicated, higher order interactions among large groups of elements play an important role. In the vertebrate retina, we show that weak correlations between pairs of neurons coexist with strongly collective behavior in the responses of ten or more neurons. Surprisingly, we find that this collective behavior is described quantitatively by models that capture the observed pairwise correlations but assume no higher order interactions. These maximum entropy models are equivalent to Ising models, and predict that larger networks are completely dominated by correlation effects. This suggests that the neural code has associative or error-correcting properties, and we provide preliminary evidence for such behavior. As a first test for the generality of these ideas, we show that similar results are obtained from networks of cultured cortical neurons.

q-bio.NC

Generic Modeling of Chemotactic Based Self-Wiring of Neural Networks

The proper functioning of the nervous system depends critically on the intricate network of synaptic connections that are generated during the system development. During the network formation, the growth cones migrate through the embryonic environment to their targets using chemical communication. A major obstacle in the elucidation of fundamental principles underlying this self-wiring is the complexity of the system being analyzed. Hence much effort is devoted to in-vitro experiments of simpler 2D model systems. In these experiments neurons are placed on Poly-L-Lysine (PLL) surfaces so it is easier to monitor their self-wiring. We developed a model to reproduce the salient features of the 2D systems, inspired by the study of bacterial colony's growth and the aggregation of amoebae. We represent the neurons (each composed of cell's soma, neurites and growth cones) by active elements that capture the generic features of the real neurons. The model also incorporates stationary units representing the cells' soma and communicating walkers representing the growth cones. The stationary units send neurites one at a time, and respond to chemical signaling. The walkers migrate in response to chemotaxis substances emitted by the soma and communicate with each other and with the soma by means of chemotactic ``feedback''. The interplay between the chemo-repulsive and chemo-attractive responses is determined by the dynamics of the walker's internal energy which is controlled by the soma. These features enable the neurons to perform the complex task of self-wiring.

cond-mat.dis-nn

From Neurons to Brain: Adaptive Self-Wiring of Neurons

During embryonic morpho-genesis, a collection of individual neurons turns into a functioning network with unique capabilities. Only recently has this most staggering example of emergent process in the natural world, began to be studied. Here we propose a navigational strategy for neurites growth cones, based on sophisticated chemical signaling. We further propose that the embryonic environment (the neurons and the glia cells) acts as an excitable media in which concentric and spiral chemical waves are formed. Together with the navigation strategy, the chemical waves provide a mechanism for communication, regulation, and control required for the adaptive self-wiring of neurons.

cond-mat

Self-Wiring of Neural Networks

In order to form the intricate network of synaptic connections in the brain, the growth cones migrate through the embryonic environment to their targets using chemical communication. As a first step to study self-wiring, 2D model systems of neurons have been used. We present a simple model to reproduce the salient features of the 2D systems. The model incorporates random walkers representing the growth cones, which migrate in response to chemotaxis substances extracted by the soma and communicate with each other and with the soma by means of attractive chemotactic "feedback".

cond-mat.dis-nn