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Rongke Lyu

Publications and source records attributed to Rongke Lyu.

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Bayesian Scalar-on-Tensor Quantile Regression for Longitudinal Data on Alzheimer's Disease

As a general and robust alternative to traditional mean regression models, quantile regression avoids the assumption of normally distributed errors, making it a versatile choice when modeling outcomes such as cognitive scores that typically have skewed distributions. Motivated by an application to Alzheimer's disease data where the aim is to explore how brain-behavior associations change over time, we propose a novel Bayesian tensor quantile regression for high-dimensional longitudinal imaging data. The proposed approach distinguishes between effects that are consistent across visits and patterns unique to each visit, contributing to the overall longitudinal trajectory. A low-rank decomposition is employed on the tensor coefficients which reduces dimensionality and preserves spatial configurations of the imaging voxels. We incorporate multiway shrinkage priors to model the visit-invariant tensor coefficients and variable selection priors on the tensor margins of the visit-specific effects. For posterior inference, we develop a computationally efficient Markov chain Monte Carlo sampling algorithm. Simulation studies reveal significant improvements in parameter estimation, feature selection, and prediction performance when compared with existing approaches. In the analysis of the Alzheimer's disease data, the flexibility of our modeling approach brings new insights as it provides a fuller picture of the relationship between the imaging voxels and the quantile distributions of the cognitive scores.

stat.ME

Bayesian Tensor Modeling for Image-based Classification of Alzheimer's Disease

Tensor-based representations are being increasingly used to represent complex data types such as imaging data, due to their appealing properties such as dimension reduction and the preservation of spatial information. Recently, there is a growing literature on using Bayesian scalar-on-tensor regression techniques that use tensor-based representations for high-dimensional and spatially distributed covariates to predict continuous outcomes. However surprisingly, there is limited development on corresponding Bayesian classification methods relying on tensor-valued covariates. Standard approaches that vectorize the image are not desirable due to the loss of spatial structure, and alternate methods that use extracted features from the image in the predictive model may suffer from information loss. We propose a novel data augmentation-based Bayesian classification approach relying on tensor-valued covariates, with a focus on imaging predictors. We propose two data augmentation schemes, one resulting in a support vector machine (SVM) classifier, and another yielding a logistic regression classifier. While both types of classifiers have been proposed independently in literature, our contribution is to extend such existing methodology to accommodate high-dimensional tensor valued predictors that involve low rank decompositions of the coefficient matrix while preserving the spatial information in the image. An efficient Markov chain Monte Carlo (MCMC) algorithm is developed for implementing these methods. Simulation studies show significant improvements in classification accuracy and parameter estimation compared to routinely used classification methods. We further illustrate our method in a neuroimaging application using cortical thickness MRI data from Alzheimer's Disease Neuroimaging Initiative, with results displaying better classification accuracy throughout several classification tasks.

stat.ME