arXiv subjects

Rossella Arcucci

Publications and source records attributed to Rossella Arcucci.

57 records · Page 4Linked to original sources

arXiv2020

Data Assimilation in the Latent Space of a Neural Network

There is an urgent need to build models to tackle Indoor Air Quality issue. Since the model should be accurate and fast, Reduced Order Modelling technique is used to reduce the dimensionality of the problem. The accuracy of the model, that represent a dynamic system, is improved integrating real data coming from sensors using Data Assimilation techniques. In this paper, we formulate a new methodology called Latent Assimilation that combines Data Assimilation and Machine Learning. We use a Convolutional neural network to reduce the dimensionality of the problem, a Long-Short-Term-Memory to build a surrogate model of the dynamic system and an Optimal Interpolated Kalman Filter to incorporate real data. Experimental results are provided for CO2 concentration within an indoor space. This methodology can be used for example to predict in real-time the load of virus, such as the SARS-COV-2, in the air by linking it to the concentration of CO2.

cs.LG↗

arXiv2020

An Epidemiological Modelling Approach for Covid19 via Data Assimilation

The global pandemic of the 2019-nCov requires the evaluation of policy interventions to mitigate future social and economic costs of quarantine measures worldwide. We propose an epidemiological model for forecasting and policy evaluation which incorporates new data in real-time through variational data assimilation. We analyze and discuss infection rates in China, the US and Italy. In particular, we develop a custom compartmental SIR model fit to variables related to the epidemic in Chinese cities, named SITR model. We compare and discuss model results which conducts updates as new observations become available. A hybrid data assimilation approach is applied to make results robust to initial conditions. We use the model to do inference on infection numbers as well as parameters such as the disease transmissibility rate or the rate of recovery. The parameterisation of the model is parsimonious and extendable, allowing for the incorporation of additional data and parameters of interest. This allows for scalability and the extension of the model to other locations or the adaption of novel data sources.

stat.AP↗

arXiv2020

A Bayesian Updating Scheme for Pandemics: Estimating the Infection Dynamics of COVID-19

Epidemic models play a key role in understanding and responding to the emerging COVID-19 pandemic. Widely used compartmental models are static and are of limited use to evaluate intervention strategies with the emerging pandemic. Applying the technology of data assimilation, we propose a Bayesian updating approach for estimating epidemiological parameters using observable information for the purpose of assessing the impacts of different intervention strategies. We adopt a concise renewal model and propose new parameters by disentangling the reduction of instantaneous reproduction number Rt into mitigation and suppression factors for quantifying intervention impacts at a finer granularity. Then we developed a data assimilation framework for estimating these parameters including constructing an observation function and developing a Bayesian updating scheme. A statistical analysis framework is then built to quantify the impact of intervention strategies by monitoring the evolution of these estimated parameters. By Investigating the impacts of intervention measures of European countries, the United States and Wuhan with the framework, we reveal the effects of interventions in these countries and the resurgence risk in the USA.

q-bio.PE↗