Ruben Cruz | Searcharxiv

arXiv2026

Microscopic Structure and Dynamics of Interfacial Water at Fluorinated vs Nonfluorinated Surfaces -- Insights from Ab-Initio Simulations and IR Spectroscopy

Per- and polyfluoroalkyl substances are a class of synthetic chemical compounds widely used as coatings to lower surface energies. Yet the microscopic mechanisms of their weak interaction with water and organic compounds remain poorly understood. Here, we perform large-scale density-functional-theory molecular dynamics simulations to investigate water at self-assembled monolayers (SAMs) of fluorinated and non-fluorinated hydrocarbons. We analyze the interfacial water structure and compare it to the prototypical hydrophobic air-water interface. The interfacial water structure at both SAMs closely resembles that at the air-water interface, featuring a distinct depletion layer and a two-dimensional hydrogen-bond network parallel to the surface. Computed anisotropic infrared spectra reproduce key experimental signatures observed in surface-enhanced infrared absorption spectroscopy (SEIRAS), including the presence of free OH vibrations directly probing the local surface-water interactions. Notably, while the free OH stretch at the hydrocarbon SAM-water interface exhibits a red shift relative to the air-water interface, indicative of weak binding, the fluorinated SAM-water interface displays a weakly blue-shifted free OH mode, in agreement with experiment. This frequency behavior defies common interpretations based on the vibrational Stark effect. Further, we show that the reorientation dynamics of water molecules are significantly slower near the fluorinated surface, which we correlate with spectral line shapes, an effect rather expected at hydrophilic surfaces. This indicates that fluorinated SAMs, despite being macroscopically more hydrophobic than their unfluorinated counterparts, exhibit spectroscopic characteristics that neither qualify it as hydrophobic nor hydrophilic.

physics.chem-ph↗

arXiv2024

Evaluating aliphatic CF, CF2 and CF3 groups as vibrational Stark effect reporters

Given the extensive use of fluorination in molecular design, it is imperative to understand the solvation properties of fluorinated compounds and the impact of the C-F bond on electrostatic interactions. Vibrational spectroscopy can provide direct insight into these interactions by using the C-F bond stretching (v(C-F)) as an electric field probe through the vibrational Stark effect (VSE). In this work, we explore the VSE of the three basic patterns of aliphatic fluorination, i.e., mono-, di-, and trifluorination in CF, CF2 and CF3 groups, respectively, and compare their response to the well-studied aromatic v(C-F). Magnitudes (i.e. Stark tuning rates) and orientations of the difference dipole vectors of the v(C-F)-containing normal modes were determined using density functional theory and a molecular dynamics (MD)-assisted solvatochromic analysis of model compounds in solvents of varying polarity. We obtain Stark tuning rates of 0.2 - 0.8 cm-1/(MV/cm), with smallest and largest electric field sensitivities for CFaliphatic and CF3,aliphatic, respectively. While average electric fields of solvation were oriented along the main symmetry axis of the CFn, and thus along its static dipole, the Stark tuning rate vectors were tilted by up to 87 deg. potentially enabling to map electrostatics in multiple dimensions. We discuss the influence of conformational heterogeneity on spectral shifts and point out the importance of multipolar and/or polarizable MD force fields to describe the electrostatics of fluorinated molecules. The implications of this work are of direct relevance for studies of fluorinated molecules as found in pharmaceuticals, fluorinated peptides and proteins.

physics.chem-ph↗