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Ruiying Chen

Publications and source records attributed to Ruiying Chen.

4 recordsLinked to original sources

ACE-GraphRAG: Agentic Context Engineering for Hierarchical GraphRAG

Hierarchical Graph Retrieval-Augmented Generation (GraphRAG) organizes corpus knowledge at multiple levels of granularity, yet fixed context construction may fail to translate these multi-resolution representations into a context suited to the current query. We identify this mismatch as the representation--inference gap. We propose Agentic Context Engineering for Hierarchical GraphRAG (ACE-GraphRAG), an inference-time context policy layer that supplements and adapts the initial context for generation. ACE-GraphRAG formulates context construction as a policy over gap-aware refinement, retrieval branches, and task-conditioned adaptation. Parallel Differential Retrieval acquires supplementary evidence from depth-oriented factual and breadth-oriented semantic branches. These evidence increments are consolidated with the initial context while preserving provenance and abstraction levels. Full-ACE applies the full policy uniformly within each task family, whereas Adaptive-ACE selects task- and topology-specific policies for individual queries. We evaluate ACE-GraphRAG on HotpotQA, 2WikiMultiHopQA, and four UltraDomain subsets across multi-hop QA and query-focused summarization. Full-ACE outperforms the evaluated RAG and GraphRAG baselines across both task families, while Adaptive-ACE further improves multi-hop QA and is preferred over Full-ACE on all four UltraDomain subsets. Ablation and topology analyses support treating context construction as a query- and task-dependent inference policy rather than a fixed procedure.

cs.CL

SEMA-RAG: A Self-Evolving Multi-Agent Retrieval-Augmented Generation Framework for Medical Reasoning

Retrieval-Augmented Generation (RAG) is widely employed to mitigate risks such as hallucinations and knowledge obsolescence in medical question answering, yet its predominantly single-round, static retrieval paradigm misaligns with the multi-stage process of clinical reasoning. This compressed workflow induces two structural deficiencies: question-to-query translation often lacks clinically grounded semantic interpretation, and retrieval lacks iterative sufficiency feedback, making it difficult to form reliable evidence chains. We argue that both issues stem from a deeper cause: overloading a single reasoning chain with heterogeneous tasks of interpretation, exploration, and adjudication. The remedy is to reconstruct the workflow via task decoupling and dynamic multi-round exploration. To this end, we propose SEMA-RAG, a Self-Evolving Multi-Agent RAG framework for medical question answering, which assigns these roles to three specialist agents: the Interpreter Agent for clinical schema interpretation, the Explorer Agent for sufficiency-driven self-evolving retrieval, and the Arbiter Agent for evidence adjudication and answer selection. Across five benchmarks and five LLM backbones, SEMA-RAG improves the strongest baseline by +6.46 accuracy points on average, measured per backbone.

cs.CL

SDE-Driven Spatio-Temporal Hypergraph Neural Networks for Irregular Longitudinal fMRI Connectome Modeling in Alzheimer's Disease

Longitudinal neuroimaging is essential for modeling disease progression in Alzheimer's disease (AD), yet irregular sampling and missing visits pose substantial challenges for learning reliable temporal representations. To address this challenge, we propose SDE-HGNN, a stochastic differential equation (SDE)-driven spatio-temporal hypergraph neural network for irregular longitudinal fMRI connectome modeling. The framework first employs an SDE-based reconstruction module to recover continuous latent trajectories from irregular observations. Based on these reconstructed representations, dynamic hypergraphs are constructed to capture higher-order interactions among brain regions over time. To further model temporal evolution, hypergraph convolution parameters evolve through SDE-controlled recurrent dynamics conditioned on inter-visit intervals, enabling disease-stage-adaptive connectivity modeling. We also incorporate a sparsity-based importance learning mechanism to identify salient brain regions and discriminative connectivity patterns. Extensive experiments on the OASIS-3 and ADNI cohorts demonstrate consistent improvements over state-of-the-art graph and hypergraph baselines in AD progression prediction. The source code is available at https://anonymous.4open.science/r/SDE-HGNN-017F.

cs.LG

Evidence-Bound Autonomous Research (EviBound): A Governance Framework for Eliminating False Claims

LLM-based autonomous research agents report false claims: tasks marked "complete" despite missing artifacts, contradictory metrics, or failed executions. EviBound is an evidence-bound execution framework that eliminates false claims through dual governance gates requiring machine-checkable evidence. Two complementary gates enforce evidence requirements. The pre-execution Approval Gate validates acceptance criteria schemas before code runs, catching structural violations proactively. The post-execution Verification Gate validates artifacts via MLflow API queries (with recursive path checking) and optionally validates metrics when specified by acceptance criteria. Claims propagate only when backed by a queryable run ID, required artifacts, and FINISHED status. Bounded, confidence-gated retries (typically 1-2 attempts) recover from transient failures without unbounded loops. The framework was evaluated on 8 benchmark tasks spanning infrastructure validation, ML capabilities, and governance stress tests. Baseline A (Prompt-Level Only) yields 100% hallucination (8/8 claimed, 0/8 verified). Baseline B (Verification-Only) reduces hallucination to 25% (2/8 fail verification). EviBound (Dual Gates) achieves 0% hallucination: 7/8 tasks verified and 1 task correctly blocked at the approval gate, all with only approximately 8.3% execution overhead. This package includes execution trajectories, MLflow run IDs for all verified tasks, and a 4-step verification protocol. Research integrity is an architectural property, achieved through governance gates rather than emergent from model scale.

cs.AI