arXiv subjects

Runlong Yu

Publications and source records attributed to Runlong Yu.

At least 37 records · Page 2Linked to original sources

arXiv2026

LLM-as-a-Judge in Healthcare: A Scoping Analysis of Applications, Methods, and Human Alignment

Large language models (LLMs) are increasingly deployed across healthcare applications, including clinical documentation, diagnostic reasoning, medicine recommendation, and medical education. Their outputs are largely unstructured clinical text, which is difficult to reliably evaluate at scale. LLM-as-a-Judge, in which an LLM evaluates another system's output against task-specific criteria, offers a scalable alternative and is increasingly used in clinical evaluation, yet its validity in healthcare remains underexamined. Existing reviews focus on general-purpose LLM evaluation or on risk framework, rather than systematically characterizing how LLM-as-a-Judge is applied in healthcare and how well their judgments align with human experts. We therefore conduct a PRISMA-guided comprehensive review of LLM-as-a-Judge applications in healthcare, searching five databases for studies published between January 2023 and February 2026. After screening 541 records, 134 studies meet the eligibility and are coded by health scenario, judge configuration, technical approach, and validation design. LLM-as-a-Judge is concentrated in clinical decision support, clinical natural language processing (NLP), medical knowledge and question answering (QA), and medical communication. OpenAI models are the most frequently used judges, and prompt engineering appears in nearly all studies, with ensemble, multi-agent, and retrieval-augmented designs as common extensions. Among studies reporting human validation, LLM judges often show moderate to strong alignment with expert judgments, although reliability varies substantially across tasks. Overall, this review positions LLM-as-a-Judge as a promising framework for scalable healthcare AI evaluation, while emphasizing that its clinical value depends on model design and rigorous validation.

cs.CY↗

arXiv2026

When Earth Foundation Models Meet Diffusion: An Application to Land Surface Temperature Super-Resolution

Land surface temperature (LST) super-resolution is important for environmental monitoring. However, it remains challenging as coarse thermal observations severely underdetermine fine-scale structure. In this paper, we propose Earth Foundation Model-guided Diffusion (EFDiff), a novel framework for super-resolution under extreme spatial degradation. EFDiff uses the Prithvi-EO-2.0 Earth foundation model to encode high-resolution multispectral reflectance into geospatial embeddings, which are injected into the denoising network via cross-attention to guide fine-scale reconstruction from highly degraded observations. We study two variants, EFDiff-$\epsilon$ and EFDiff-$x_0$, which offer complementary trade-offs between perceptual realism and pixel-level fidelity. We evaluate EFDiff under an extreme $32\times$ scale gap using a globally diverse benchmark comprising 242,416 co-registered Landsat thermal-reflectance patches. Results show that EFDiff consistently outperforms baseline methods and that cross-attention conditioning by EFM is more effective than HLS channel concatenation. Although we present EFDiff in the context of LST super-resolution, the framework is broadly applicable to remote sensing problems in which pretrained geospatial representations can guide generative reconstruction.

cs.CV↗

arXiv2026

FlowRefiner: Flow Matching-Based Iterative Refinement for 3D Turbulent Flow Simulation

Accurate autoregressive prediction of 3D turbulent flows remains challenging for neural PDE solvers, as small errors in fine-scale structures can accumulate rapidly over rollout. In this paper, we propose FlowRefiner, a flow matching-based iterative refinement framework for 3D turbulent flow simulation. The method replaces stochastic denoising refinement with deterministic ODE-based correction, uses a unified velocity-field regression objective across all refinement stages, and introduces a decoupled sigma schedule that fixes the noise range independently of refinement depth. These design choices yield stable and effective refinement in the small-noise regime. Experiments on large-scale 3D turbulence with rich multi-scale structures show that FlowRefiner achieves state-of-the-art autoregressive prediction accuracy and strong physical consistency. Although developed for turbulent flow simulation, the proposed framework is broadly applicable to iterative refinement problems in scientific modeling.

physics.flu-dyn↗

arXiv2026

Flow Learners for PDEs: Toward a Physics-to-Physics Paradigm for Scientific Computing

Partial differential equations (PDEs) govern nearly every physical process in science and engineering, but solving them at scale remains prohibitively expensive. Generative AI has transformed language, vision, and protein science, but learned PDE solvers have not undergone a comparable shift. Existing paradigms each capture part of the problem. Physics-informed neural networks embed residual structure, although they are often difficult to optimize in stiff, multiscale, or large-domain regimes. Neural operators amortize across instances, although they commonly inherit a snapshot-prediction view of solving and can degrade over long rollouts. Diffusion-based solvers model uncertainty, although they are often built on a solver template that still centers on state regression. We argue that the core issue is the abstraction used to train learned solvers. Many models are asked to predict states, while many scientific settings require modeling how uncertainty moves through constrained dynamics. The relevant object is transport over physically admissible futures. This motivates flow learners: models that parameterize transport vector fields and generate trajectories through integration, echoing the continuous dynamics that define PDE evolution. This physics-to-physics alignment supports continuous-time prediction, native uncertainty quantification, and new opportunities for physics-aware solver design. We explain why transport-based learning offers a stronger organizing principle for learned PDE solving and outline the research agenda that follows from this shift.

cs.LG↗

arXiv2026

Politicized Attention Shifts Amplify Polarization in the Information Ecosystem during California Wildfires

Wildfires require governments to communicate under conditions of urgency, uncertainty, and intense public scrutiny, yet such communication now unfolds within a digitally mediated environment shaped by polarization and engagement-based amplification. We analyze over 1.3 million wildfire-related social media posts from California (2016-2025) to examine how institutional actors are evaluated within this landscape. Users' stance toward government is actor-specific: individual political officials are discussed more negatively than operational agencies across federal, state, and local levels, and this gap widens during extreme wildfire events. Moreover, interaction networks become increasingly modular over time, consolidating into polarized communities in which negativity concentrates within cohesive clusters. Engagement-weighted measures show that highly interactive negative content disproportionately shapes visible discourse, while crisis periods redirect attention from emergency agencies to high-profile political figures, reinforcing reputational divergence. These findings indicate that wildfire communication operates within a polarized, engagement-ranked ecosystem in which evaluative tone, network structure, and visibility dynamics jointly shape institutional perception. Effective disaster communication should therefore account for the structural conditions of contemporary digital public communities.

cs.SI↗

arXiv2026

Retrieval-Augmented Multi-scale Framework for County-Level Crop Yield Prediction Across Large Regions

This paper proposes a new method for crop yield prediction, which is essential for developing management strategies, informing insurance assessments, and ensuring long-term food security. Although existing data-driven approaches have shown promise in this domain, their performance often degrades when applied across large geographic regions and long time periods. This limitation arises from two key challenges: (1) difficulty in jointly capturing short-term and long-term temporal patterns, and (2) inability to effectively accommodate spatial data variability in agricultural systems. Ignoring these issues often leads to unreliable predictions for specific regions or years, which ultimately affects policy decisions and resource allocation. In this paper, we propose a new predictive framework to address these challenges. First, we introduce a new backbone model architecture that captures both short-term daily-scale crop growth dynamics and long-term dependencies across years. To further improve generalization across diverse spatial regions, we augment this model with a retrieval-based adaptation strategy. Recognizing the substantial yield variation across years, we design a novel retrieval-and-refinement pipeline that adjusts retrieved samples by removing cross-year bias not explained by input features. Our experiments on real-world county-level corn yield data over 630 counties in the US demonstrate that our method consistently outperforms different types of baselines. The results also verify the effectiveness of the retrieval-based augmentation method in improving model robustness under spatial heterogeneity.

cs.LG↗

arXiv2026

Role-Aware Conditional Inference for Spatiotemporal Ecosystem Carbon Flux Prediction

Accurate prediction of terrestrial ecosystem carbon fluxes (e.g., CO$_2$, GPP, and CH$_4$) is essential for understanding the global carbon cycle and managing its impacts. However, prediction remains challenging due to strong spatiotemporal heterogeneity: ecosystem flux responses are constrained by slowly varying regime conditions, while short-term fluctuations are driven by high-frequency dynamic forcings. Most existing learning-based approaches treat environmental covariates as a homogeneous input space, implicitly assuming a global response function, which leads to brittle generalization across heterogeneous ecosystems. In this work, we propose Role-Aware Conditional Inference (RACI), a process-informed learning framework that formulates ecosystem flux prediction as a conditional inference problem. RACI employs hierarchical temporal encoding to disentangle slow regime conditioners from fast dynamic drivers, and incorporates role-aware spatial retrieval that supplies functionally similar and geographically local context for each role. By explicitly modeling these distinct functional roles, RACI enables a model to adapt its predictions across diverse environmental regimes without training separate local models or relying on fixed spatial structures. We evaluate RACI across multiple ecosystem types (wetlands and agricultural systems), carbon fluxes (CO$_2$, GPP, CH$_4$), and data sources, including both process-based simulations and observational measurements. Across all settings, RACI consistently outperforms competitive spatiotemporal baselines, demonstrating improved accuracy and spatial generalization under pronounced environmental heterogeneity.

cs.LG↗

arXiv2026

Bridging the Urban Divide: Adaptive Cross-City Learning for Disaster Sentiment Understanding

Social media platforms provide a real-time lens into public sentiment during natural disasters; however, models built solely on textual data often reinforce urban-centric biases and overlook underrepresented communities. This paper introduces an adaptive cross-city learning framework that enhances disaster sentiment understanding by integrating mobility-informed behavioral signals and city similarity-based data augmentation. Focusing on the January 2025 Southern California wildfires, our model achieves state-of-the-art performance and reveals geographically diverse sentiment patterns, particularly in areas experiencing overlapping fire exposure or delayed emergency responses. We further identify positive correlations between emotional expressions and real-world mobility shifts, underscoring the value of combining behavioral and textual features. Through extensive experiments, we demonstrate that multimodal fusion and city-aware training significantly improve both accuracy and fairness. Collectively, these findings highlight the importance of context-sensitive sentiment modeling and provide actionable insights toward developing more inclusive and equitable disaster response systems.

cs.SI↗

arXiv2026

PEST: Physics-Enhanced Swin Transformer for 3D Turbulence Simulation

Accurate simulation of turbulent flows is fundamental to scientific and engineering applications. Direct numerical simulation (DNS) offers the highest fidelity but is computationally prohibitive, while existing data-driven alternatives struggle with stable long-horizon rollouts, physical consistency, and faithful simulation of small-scale structures. These challenges are particularly acute in three-dimensional (3D) settings, where the cubic growth of spatial degrees of freedom dramatically amplifies computational cost, memory demand, and the difficulty of capturing multi-scale interactions. To address these challenges, we propose a Physics-Enhanced Swin Transformer (PEST) for 3D turbulence simulation. PEST leverages a window-based self-attention mechanism to effectively model localized PDE interactions while maintaining computational efficiency. We introduce a frequency-domain adaptive loss that explicitly emphasizes small-scale structures, enabling more faithful simulation of high-frequency dynamics. To improve physical consistency, we incorporate Navier--Stokes residual constraints and divergence-free regularization directly into the learning objective. Extensive experiments on two representative turbulent flow configurations demonstrate that PEST achieves accurate, physically consistent, and stable autoregressive long-term simulations, outperforming existing data-driven baselines.

physics.flu-dyn↗

arXiv2026

Learning PDE Solvers with Physics and Data: A Unifying View of Physics-Informed Neural Networks and Neural Operators

Partial differential equations (PDEs) are central to scientific modeling. Modern workflows increasingly rely on learning-based components to support model reuse, inference, and integration across large computational processes. Despite the emergence of various physics-aware data-driven approaches, the field still lacks a unified perspective to uncover their relationships, limitations, and appropriate roles in scientific workflows. To this end, we propose a unifying perspective to place two dominant paradigms: Physics-Informed Neural Networks (PINNs) and Neural Operators (NOs), within a shared design space. We organize existing methods from three fundamental dimensions: what is learned, how physical structures are integrated into the learning process, and how the computational load is amortized across problem instances. In this way, many challenges can be best understood as consequences of these structural properties of learning PDEs. By analyzing advances through this unifying view, our survey aims to facilitate the development of reliable learning-based PDE solvers and catalyze a synthesis of physics and data.

cs.LG↗

arXiv2025

GREAT: Generalizable Representation Enhancement via Auxiliary Transformations for Zero-Shot Environmental Prediction

Environmental modeling faces critical challenges in predicting ecosystem dynamics across unmonitored regions due to limited and geographically imbalanced observation data. This challenge is compounded by spatial heterogeneity, causing models to learn spurious patterns that fit only local data. Unlike conventional domain generalization, environmental modeling must preserve invariant physical relationships and temporal coherence during augmentation. In this paper, we introduce Generalizable Representation Enhancement via Auxiliary Transformations (GREAT), a framework that effectively augments available datasets to improve predictions in completely unseen regions. GREAT guides the augmentation process to ensure that the original governing processes can be recovered from the augmented data, and the inclusion of the augmented data leads to improved model generalization. Specifically, GREAT learns transformation functions at multiple layers of neural networks to augment both raw environmental features and temporal influence. They are refined through a novel bi-level training process that constrains augmented data to preserve key patterns of the original source data. We demonstrate GREAT's effectiveness on stream temperature prediction across six ecologically diverse watersheds in the eastern U.S., each containing multiple stream segments. Experimental results show that GREAT significantly outperforms existing methods in zero-shot scenarios. This work provides a practical solution for environmental applications where comprehensive monitoring is infeasible.

cs.LG↗

arXiv2025

Empowering LLM Agents with Geospatial Awareness: Toward Grounded Reasoning for Wildfire Response

Effective disaster response is essential for safeguarding lives and property. Existing statistical approaches often lack semantic context, generalize poorly across events, and offer limited interpretability. While Large language models (LLMs) provide few-shot generalization, they remain text-bound and blind to geography. To bridge this gap, we introduce a Geospatial Awareness Layer (GAL) that grounds LLM agents in structured earth data. Starting from raw wildfire detections, GAL automatically retrieves and integrates infrastructure, demographic, terrain, and weather information from external geodatabases, assembling them into a concise, unit-annotated perception script. This enriched context enables agents to produce evidence-based resource-allocation recommendations (e.g., personnel assignments, budget allocations), further reinforced by historical analogs and daily change signals for incremental updates. We evaluate the framework in real wildfire scenarios across multiple LLM models, showing that geospatially grounded agents can outperform baselines. The proposed framework can generalize to other hazards such as floods and hurricanes.

cs.AI↗

arXiv2025

Geo-Aware Models for Stream Temperature Prediction across Different Spatial Regions and Scales

Understanding environmental ecosystems is vital for the sustainable management of our planet. However,existing physics-based and data-driven models often fail to generalize to varying spatial regions and scales due to the inherent data heterogeneity presented in real environmental ecosystems. This generalization issue is further exacerbated by the limited observation samples available for model training. To address these issues, we propose Geo-STARS, a geo-aware spatio-temporal modeling framework for predicting stream water temperature across different watersheds and spatial scales. The major innovation of Geo-STARS is the introduction of geo-aware embedding, which leverages geographic information to explicitly capture shared principles and patterns across spatial regions and scales. We further integrate the geo-aware embedding into a gated spatio-temporal graph neural network. This design enables the model to learn complex spatial and temporal patterns guided by geographic and hydrological context, even with sparse or no observational data. We evaluate Geo-STARS's efficacy in predicting stream water temperature, which is a master factor for water quality. Using real-world datasets spanning 37 years across multiple watersheds along the eastern coast of the United States, Geo-STARS demonstrates its superior generalization performance across both regions and scales, outperforming state-of-the-art baselines. These results highlight the promise of Geo-STARS for scalable, data-efficient environmental monitoring and decision-making.

cs.LG↗

arXiv2025

Truth Without Comprehension: A BlueSky Agenda for Steering the Fourth Mathematical Crisis

Machine-generated proofs are poised to reach large-scale, human-unreadable artifacts. They foreshadow what we call the Fourth Mathematical Crisis. This crisis crystallizes around three fundamental tensions: trusting proofs that no human can inspect, understanding results that no one can fully read, and verifying systems that themselves resist verification. As a minimal yet principled response, we propose the Human Understandability (HU) meta-axiom, which requires that every proof admits at least one projection that is resource-bounded, divergence-measured, and acceptable to a verifier. Confronting these questions opens a timely research agenda and points toward new directions in scalable reasoning, interpretable inference, and epistemic trust for the era of machine-scale mathematics.

cs.ET↗

arXiv2025

Learning to Retrieve for Environmental Knowledge Discovery: An Augmentation-Adaptive Self-Supervised Learning Framework

The discovery of environmental knowledge depends on labeled task-specific data, but is often constrained by the high cost of data collection. Existing machine learning approaches usually struggle to generalize in data-sparse or atypical conditions. To this end, we propose an Augmentation-Adaptive Self-Supervised Learning (A$^2$SL) framework, which retrieves relevant observational samples to enhance modeling of the target ecosystem. Specifically, we introduce a multi-level pairwise learning loss to train a scenario encoder that captures varying degrees of similarity among scenarios. These learned similarities drive a retrieval mechanism that supplements a target scenario with relevant data from different locations or time periods. Furthermore, to better handle variable scenarios, particularly under atypical or extreme conditions where traditional models struggle, we design an augmentation-adaptive mechanism that selectively enhances these scenarios through targeted data augmentation. Using freshwater ecosystems as a case study, we evaluate A$^2$SL in modeling water temperature and dissolved oxygen dynamics in real-world lakes. Experimental results show that A$^2$SL significantly improves predictive accuracy and enhances robustness in data-scarce and atypical scenarios. Although this study focuses on freshwater ecosystems, the A$^2$SL framework offers a broadly applicable solution in various scientific domains.

cs.LG↗

arXiv2025

RAG for Geoscience: What We Expect, Gaps and Opportunities

Retrieval-Augmented Generation (RAG) enhances language models by combining retrieval with generation. However, its current workflow remains largely text-centric, limiting its applicability in geoscience. Many geoscientific tasks are inherently evidence-hungry. Typical examples involve imputing missing observations using analog scenes, retrieving equations and parameters to calibrate models, geolocating field photos based on visual cues, or surfacing historical case studies to support policy analyses. A simple ``retrieve-then-generate'' pipeline is insufficient for these needs. We envision Geo-RAG, a next-generation paradigm that reimagines RAG as a modular retrieve $\rightarrow$ reason $\rightarrow$ generate $\rightarrow$ verify loop. Geo-RAG supports four core capabilities: (i) retrieval of multi-modal Earth data; (ii) reasoning under physical and domain constraints; (iii) generation of science-grade artifacts; and (iv) verification of generated hypotheses against numerical models, ground measurements, and expert assessments. This shift opens new opportunities for more trustworthy and transparent geoscience workflows.

cs.ET↗

arXiv2025

LSDTs: LLM-Augmented Semantic Digital Twins for Adaptive Knowledge-Intensive Infrastructure Planning

Digital Twins (DTs) offer powerful tools for managing complex infrastructure systems, but their effectiveness is often limited by challenges in integrating unstructured knowledge. Recent advances in Large Language Models (LLMs) bring new potential to address this gap, with strong abilities in extracting and organizing diverse textual information. We therefore propose LSDTs (LLM-Augmented Semantic Digital Twins), a framework that helps LLMs extract planning knowledge from unstructured documents like environmental regulations and technical guidelines, and organize it into a formal ontology. This ontology forms a semantic layer that powers a digital twin-a virtual model of the physical system-allowing it to simulate realistic, regulation-aware planning scenarios. We evaluate LSDTs through a case study of offshore wind farm planning in Maryland, including its application during Hurricane Sandy. Results demonstrate that LSDTs support interpretable, regulation-aware layout optimization, enable high-fidelity simulation, and enhance adaptability in infrastructure planning. This work shows the potential of combining generative AI with digital twins to support complex, knowledge-driven planning tasks.

cs.ET↗

arXiv2025

From Pixels to Places: A Systematic Benchmark for Evaluating Image Geolocalization Ability in Large Language Models

Image geolocalization, the task of identifying the geographic location depicted in an image, is important for applications in crisis response, digital forensics, and location-based intelligence. While recent advances in large language models (LLMs) offer new opportunities for visual reasoning, their ability to perform image geolocalization remains underexplored. In this study, we introduce a benchmark called IMAGEO-Bench that systematically evaluates accuracy, distance error, geospatial bias, and reasoning process. Our benchmark includes three diverse datasets covering global street scenes, points of interest (POIs) in the United States, and a private collection of unseen images. Through experiments on 10 state-of-the-art LLMs, including both open- and closed-source models, we reveal clear performance disparities, with closed-source models generally showing stronger reasoning. Importantly, we uncover geospatial biases as LLMs tend to perform better in high-resource regions (e.g., North America, Western Europe, and California) while exhibiting degraded performance in underrepresented areas. Regression diagnostics demonstrate that successful geolocalization is primarily dependent on recognizing urban settings, outdoor environments, street-level imagery, and identifiable landmarks. Overall, IMAGEO-Bench provides a rigorous lens into the spatial reasoning capabilities of LLMs and offers implications for building geolocation-aware AI systems.

cs.CV↗