arXiv subjects

Rushani Wijesuriya

Publications and source records attributed to Rushani Wijesuriya.

4 recordsLinked to original sources

arXiv2026

A roadmap for systematic identification and analysis of multiple biases in causal inference

Observational studies examining causal effects rely on unverifiable assumptions, the violation of which can induce multiple biases. Quantitative bias analysis (QBA) methods examine the sensitivity of findings to such violations, generally, by producing estimates under alternative assumptions, incorporating external information. Although substantial guidance exists for implementing QBA, there is limited guidance on how to systematically determine the assumptions underlying a primary causal analysis and the potential violations that should guide bias analysis. Consequently, many assumptions remain implicit, leading to selective and therefore misleading QBA. To address this gap, we propose a roadmap for systematically identifying and analysing multiple biases. Briefly, this consists of (1) articulating the assumptions underlying the primary analysis through specification and emulation of the ideal trial that defines the causal estimand and depicting these assumptions using a causal diagram; (2) extending the diagram to depict alternative assumptions under which biases may arise; (3) obtaining a single estimate that simultaneously corrects for all potential biases. We illustrate the roadmap using an investigation of the effect of breastfeeding on risk of childhood asthma, and through simulations illustrate the need for analysing multiple biases jointly rather than one at a time.

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arXiv2025

The ideal trial: defining causal estimands that balance relevance and feasibility in target trial emulations and actual randomized trials

Causal inference is the goal of randomized trials and many observational studies. The first step in a formal causal inference framework is to define the causal estimand, and in both types of study this can be intuitively defined as the effect in an ideal trial: a hypothetical perfect randomized experiment (with representative sample, perfect adherence, etc.). The target trial framework is increasingly used for causal inference in observational studies, but clarity is lacking in how a target trial should be specified and how it relates to an ideal trial. In this paper, we review the concept of the ideal trial and highlight the need to balance relevance for decision-making in the real world and feasibility of estimation when specifying it. We then consider the question of how a target trial should be specified, outlining the challenges of a recommended approach, commonly seen in applications, that puts the focus heavily on feasibility of estimation: to specify the target trial such that it is closely aligned with the observational data (e.g. uses the same eligibility criteria). We argue that with this "aligned" approach, biases may remain relative to the estimand of ultimate practical interest, defined by the ideal trial, which mirror the often-overlooked biases of actual trials. We conclude that consideration of the ideal trial and of how the target trial and its emulation or the actual trial differ from it is necessary to identify and manage all bias sources in both settings. An example from respiratory epidemiology is used for illustration.

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arXiv2024

Multiple imputation for longitudinal data: A tutorial

Longitudinal studies are frequently used in medical research and involve collecting repeated measures on individuals over time. Observations from the same individual are invariably correlated and thus an analytic approach that accounts for this clustering by individual is required. While almost all research suffers from missing data, this can be particularly problematic in longitudinal studies as participation often becomes harder to maintain over time. Multiple imputation (MI) is widely used to handle missing data in such studies. When using MI, it is important that the imputation model is compatible with the proposed analysis model. In a longitudinal analysis, this implies that the clustering considered in the analysis model should be reflected in the imputation process. Several MI approaches have been proposed to impute incomplete longitudinal data, such as treating repeated measurements of the same variable as distinct variables or using generalized linear mixed imputation models. However, the uptake of these methods has been limited, as they require additional data manipulation and use of advanced imputation procedures. In this tutorial, we review the available MI approaches that can be used for handling incomplete longitudinal data, including where individuals are clustered within higher-level clusters. We illustrate implementation with replicable R and Stata code using a case study from the Childhood to Adolescence Transition Study.

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arXiv2020

Evaluation of approaches for accommodating interactions and non-linear terms in multiple imputation of incomplete three-level data

Three-level data structures arising from repeated measures on individuals clustered within larger units are common in health research studies. Missing data are prominent in such studies and are often handled via multiple imputation (MI). Although several MI approaches can be used to account for the three-level structure, including adaptations to single- and two-level approaches, when the substantive analysis model includes interactions or quadratic effects these too need to be accommodated in the imputation model. In such analyses, substantive model compatible (SMC) MI has shown great promise in the context of single-level data. While there have been recent developments in multilevel SMC MI, to date only one approach that explicitly handles incomplete three-level data is available. Alternatively, researchers can use pragmatic adaptations to single- and two-level MI approaches, or two-level SMC-MI approaches. We describe the available approaches and evaluate them via simulation in the context of a three three-level random effects analysis models involving an interaction between the incomplete time-varying exposure and time, an interaction between the time-varying exposure and an incomplete time-fixed confounder, or a quadratic effect of the exposure. Results showed that all approaches considered performed well in terms of bias and precision when the target analysis involved an interaction with time, but the three-level SMC MI approach performed best when the target analysis involved an interaction between the time-varying exposure and an incomplete time-fixed confounder, or a quadratic effect of the exposure. We illustrate the methods using data from the Childhood to Adolescence Transition Study.

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