arXiv subjects

S. D. Doty

Publications and source records attributed to S. D. Doty.

33 records · Page 2Linked to original sources

arXiv2007

Infrared Molecular Starburst Fingerprints in Deeply Obscured (U)LIRG Nuclei

High resolution spectra of the Spitzer Space Telescope show vibration-rotation absorption bands of gaseous C2H2, HCN, and CO2 molecules toward a sample of deeply obscured (U)LIRG nuclei. The observed bands reveal the presence of dense (n>~ 10^7 cm^-3), warm (T_ex = 200-700 K) molecular gas with high column densities of these molecules ranging from a few 10^15 - 10^17 cm^-2. Abundances relative to H2, inferred from the silicate optical depth, range from ~10^-7 to 10^-6 and show no correlation with temperature. Theoretical studies show that the high abundances of both C2H2 and HCN exclude a X-ray dominated region (XDR) associated with the toroid surrounding an AGN as the origin of this dense warm molecular gas. Galactic massive protostars in the so-called Hot Core phase have similar physical characteristics with comparable high abundances of C2H2, HCN, and CO2 in the hot phase. However, the abundances of C2H2 and HCN and the C2H2/CO2 and HCN/CO2 ratios are much higher toward the (U)LIRGs in the cooler (T_ex <= 400 K) phase. We suggest that the warm dense molecular gas revealed by the mid-IR absorption lines is associated with a phase of deeply embedded star formation where the extreme pressures and densities of the nuclear starburst environment have inhibited the expansion of HII regions and the global disruption of the star forming molecular cloud cores, and `trapped' the star formation process in an `extended' Hot Core phase.

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arXiv2007

Tracing high energy radiation with molecular lines near deeply embedded protostars

Submillimeter lines of CN, NO, CO+ and SO+, and upper limits on SH+ and N2O are observed with the James Clerk Maxwell Telescope in two high-mass and up to nine low-mass young stellar objects and compared with chemical models. Constant fractional abundances derived from radiative transfer modeling of the line strengths are x(CN) ~ a few x 10^{-11}-10^{-8}, x(NO) ~ 10^{-9}-10^{-8} and x(CO+) ~ 10^{-12}-10^{-10}. SO+ has abundances of a few x 10^{-11} in the high-mass objects and upper limits of ~ 10^{-12}-10^{-11} in the low-mass sources. All abundances are up to 1-2 orders of magnitude higher if the molecular emission is assumed to originate mainly from the inner region (< 1000 AU) of the envelope. For high-mass sources, the CN, SO+ and CO+ abundances and abundance ratios are best explained by an enhanced far-ultraviolet (FUV) field impacting gas at temperatures of a few hundred K. The observed column densities require that this region of enhanced FUV has scales comparable to the observing beam, such as in a geometry in which the enhanced FUV irradiates outflow walls. For low-mass sources, the required temperatures within the FUV models of T > 300 K are much higher than found in models, so that an X-ray enhanced region close to the protostar (r < 500 AU) is more plausible. The observed abundances imply X-ray fluxes for the Class 0 objects of L_X ~ 10^{29}-10^{31} erg s^{-1}, comparable to those observed from low-mass Class I protostars. Spatially resolved data are needed to clearly distinguish the effects of FUV and X-rays for individual species.

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arXiv2006

Astrochemical confirmation of the rapid evolution of massive YSOs and explanation for the inferred ages of hot cores

Aims. To understand the roles of infall and protostellar evolution on the envelopes of massive young stellar objects (YSOs). Methods. The chemical evolution of gas and dust is traced, including infall and realistic source evolution. The temperatures are determined self-consistently. Both ad/desorption of ices using recent laboratory temperature-programmed-desorption measurements are included. Results. The observed water abundance jump near 100 K is reproduced by an evaporation front which moves outward as the luminosity increases. Ion-molecule reactions produce water below 100 K. The age of the source is constrained to t \~ 8 +/- 4 x 10^4 yrs since YSO formation. It is shown that the chemical age-dating of hot cores at ~ few x 10^3 - 10^4 yr and the disappearance of hot cores on a timescale of ~ 10^5 yr is a natural consequence of infall in a dynamic envelope and protostellar evolution. Dynamical structures of ~ 350AU such as disks should contain most of the complex second generation species. The assumed order of desorption kinetics does not affect these results.

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arXiv2006

Water destruction by X-rays in young stellar objects

We study the H2O chemistry in star-forming environments under the influence of a central X-ray source and a central far ultraviolet (FUV) radiation field. The gas-phase water chemistry is modeled as a function of time, hydrogen density and X-ray flux. To cover a wide range of physical environments, densities between n_H = 10^4-10^9 cm^-3 and temperatures between T = 10-1000 K are studied. Three different regimes are found: For T < 100 K, the water abundance is of order 10^-7-10^-6 and can be somewhat enhanced or reduced due to X-rays, depending on time and density. For 100 K < T < 250 K, H2O is reduced from initial x(H2O) ~ 10^-4 following ice evaporation to x(H2O) ~ 10^-6 for F_X > 10^-3 ergs s-1 cm^-2 (t = 10^4 yrs) and for F_X > 10^-4 ergs s^-1 cm^-2 (t = 10^5 yrs). At higher temperatures (T > 250 K) and hydrogen densities, water can persist with x(H2O) ~ 10^-4 even for high X-ray fluxes. The X-ray and FUV models are applied to envelopes around low-mass Class 0 and I young stellar objects (YSOs). Water is destroyed in both Class 0 and I envelopes on relatively short timescales (t ~ 5000 yrs) for realistic X-ray fluxes, although the effect is less prominent in Class 0 envelopes due to the higher X-ray absorbing densities there. FUV photons from the central source are not effective in destroying water. The average water abundance in Class I sources for L_X > 10^27 ergs s^-1 is predicted to be x(H2O) < 10^-6.

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arXiv2005

Effects of clumping on temperature I: externally heated clouds

We present a study of radiative transfer in dusty, clumpy star-forming regions. A series of self-consistent, 3-D, continuum radiative transfer models are constructed for a grid of models parameterized by central luminosity, filling factor, clump radius, and face-averaged optical depth. The temperature distribution within the clouds is studied as a function of this parameterization. Among our results, we find that: (a) the effective optical depth is smaller in clumpy regions than in equivalent homogeneous regions; (b) penetration of radiation is drive by the fraction of open sky (FOS) -- which measures the fraction of solid angle which is devoid of clumps; (c) FOS increases as clump radius increases and filling factor decreases; (d) for FOS > 0.6-0.8 the sky is sufficiently open that the temperature is relatively insensitive to FOS; (e) the physical process by which radiation penetrates is streaming between clumps; (f) filling factor dominates the temperature distribution for large optical depths, and at small clump radii for small optical depths; (g) at lower optical depths, the temperature distribution is most sensitive to filling factors of 1-10 per cent, in accordance with many observations; (h) direct shadowing can be important approximately one clump radius behind a clump.

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arXiv2005

X-ray chemistry in envelopes around young stellar objects

We present chemical models of the envelope of a young stellar object (YSO) exposed to a central X-ray source. The models are applied to the massive star-forming region AFGL 2591 for different X-ray fluxes. The total X-ray ionization rate is dominated by the `secondary' ionization rate of H2 resulting from fast electrons. The carbon, sulphur and nitrogen chemistries are discussed. It is found that He+ and H3+ are enhanced and trigger a peculiar chemistry. Several molecular X-ray tracers are found and compared to tracers of the far ultraviolet (FUV) field. Like ultraviolet radiation fields, X-rays enhance simple hydrides, ions and radicals. In contrast to ultraviolet photons, X-rays can penetrate deep into the envelope and affect the chemistry even at large distances from the source. Whereas the FUV enhanced species cover a region of 200-300 AU, the region enhanced by X-rays is >1000 AU. Best-fit models for AFGL 2591 predict an X-ray luminosity LX > 1e+31 ergs/s with a hard X-ray spectrum TX > 3e+07 K. Furthermore, we find LX/Lbol ~ 1e-6. The chemistry of the bulk of the envelope mass is dominated by cosmic-ray induced reactions rather than by X-ray induced ionization for X-ray luminosities LX < 1e+33 ergs/s. The calculated line intensities of HCO+ and HCS+ show that high-J lines are more affected than lower J lines by the presence of X-rays due to their higher critical densities, and that such differences are detectable even with large aperture single-dish telescopes. Future instruments such as Herschel-HIFI or SOFIA will be able to observe X-ray enhanced hydrides whereas the sensitivity and spatial resolution of ALMA is well-suited to measure the size and geometry of the region affected by X-rays.

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arXiv2004

X-ray Chemistry in the Envelopes around Young Stellar Objects

We have studied the influence of X-rays from a massive young stellar object (YSO) on the chemistry of its own envelope by extending the models of Doty et al. (2002) and Staeuber et al. (2004). The models are applied to the massive star-forming region AFGL 2591 for different X-ray luminosities and plasma temperatures. Enhanced column densities for several species are predicted. In addition we present first detections of CO+ and SO+ toward AFGL 2591. These molecular ions are believed to be high-energy tracers. Herschel-HIFI will be able to observe other tracers like CH and CH+ whereas ALMA is well suited to measure the size and geometry of the emitting region.

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arXiv2004

Influence of UV radiation from a massive YSO on the chemistry of its envelope

We have studied the influence of far ultraviolet (UV) radiation from a massive young stellar object (YSO) on the chemistry of its own envelope by extending the models of Doty et al. (2002) to include a central source of UV radiation. The models are applied to the massive star-forming region AFGL 2591 for different inner UV field strengths. Depth-dependent abundance profiles for several molecules are presented and discussed. We predict enhanced column densities for more than 30 species, especially radicals and ions. Comparison between observations and models is improved with a moderate UV field incident on the inner envelope, corresponding to an enhancement factor G0~10-100 at 200 AU from the star with an optical depth tau~15-17. Subtle differences are found compared with traditional models of Photon Dominated Regions (PDRs) because of the higher temperatures and higher gas-phase H2O abundance caused by evaporation of ices in the inner region. In particular, the CN/HCN ratio is not a sensitive tracer of the inner UV field, in contrast with the situation for normal PDRs: for low UV fields, the extra CN reacts with H2 in the inner dense and warm region and produces more HCN. It is found that the CH+ abundance is strongly enhanced and grows steadily with increasing UV field. High-J lines of molecules like CN and HCN are most sensitive to the inner dense region where UV radiation plays a role. Thus, even though the total column density affected by UV photons is small, comparison of high-J and low-J lines can selectively trace and distinguish the inner UV field from the outer one. In addition, future Herschel-HIFI observations of hydrides can sensitively probe the inner UV field.

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arXiv2004

Physical-chemical modeling of the low-mass protostar IRAS 16293-2422

We present detailed gas-phase chemical models for the envelope of the low-mass star-forming region IRAS 16293-2422. By considering both time- and space-dependent chemistry, these models are used to study both the physical structure proposed by Schoier et al. (2002), as well as the chemical evolution of this region. A new feature of our study is the use of a detailed, self-consistent radiative transfer model to translate the model abundances into line strengths and compare them directly with observations of a total of 76 transitions for 18 chemical species, and their isotopes. The model can reproduce many of the line strengths observed within 50%. The best fit is for times in the range of 3e3 - 3e4 yrs, and requires only minor modifications to our model for the high-mass star-forming region AFGL 2591. The ionization rate for the source may be higher than previously expected -- either due to an enhanced cosmic-ray ionization rate, or, more probably, to the presence of X-ray induced ionization from the center. A significant fraction of the CO is found to desorb in the temperature range of 15-40 K; below this temperature, \~90% or more of the CO is frozen out. The inability of the model to explain the HCS+, C2H, and OCS abundances suggests the importance of further laboratory studies of basic reaction rates. Finally, predictions of the abundances and spatial distributions of other species which could be observed by future facilities (e.g., Herschel-HIFI, SOFIA, millimeter arrays) are provided.

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arXiv2004

A study of some current methods of analysing observations of star forming regions

We present an evaluative study of some current methods utilized in the analysis of infrared (IR) observatinons of star-forming regions. A series of self-consistent radiative transfer models are constructed, with the outputs analysed using these methods to infer source properties such as dust temperature, mass, opacity function, and density distribution. Any discrepancies between the inferred and model quantities can be attributed to the analysis methods. The range of validity of most methods is smaller than expected, due to two effects: (1) limited applicability of the Rayleigh-Jeans limit except to very long wavelengths, and (2) significant errors in the isothermal approximation, even when temperature variations are less than 2 K over 90% of the region. Still, an accurate mean dust temperature can be found using a modified Wien's law. This temperature can yield dust masses to within 10-25% -- much better than masses inferred from the integrated luminosity. Using long wavelengths (greater than 1000 - 2000 microns), the opacity index can be determined from the far-IR spectrum to within 20%. Fitting the spectrum yields better results. The desnity distribution can be somewhat constrained by fitting the surface brightness, for well-resolved sources. Better results are found by fitting the flux spectrum with detailed models.

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arXiv2003

High-Energy Radiation Probes of Protostellar Envelopes

We present observations of molecular high-energy radiation probes and report the first detections of CO+ toward W3 IRS5, a source containing ultracompact HII regions. UV radiation and X-rays from the central objects may enhance molecules due to photodissociation and ionization processes. To study the effects on the immediate YSO environment, we are developing time- and depth-dependant chemical models containing UV and X-ray chemistry, by extending the models of Doty et al. (2002). Molecules like CO+ or NO may be used as tracers of very early X-ray emission in regions of high extinction, from which no X-ray photons can be detected.

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arXiv2002

Numerical methods for non-LTE line radiative transfer: Performance and convergence characteristics

Comparison is made between a number of independent computer programs for radiative transfer in molecular rotational lines. The test models are spherically symmetric circumstellar envelopes with a given density and temperature profile. The first two test models have a simple power law density distribution, constant temperature and a fictive 2-level molecule, while the other two test models consist of an inside-out collapsing envelope observed in rotational transitions of HCO+. For the 2-level molecule test problems all codes agree well to within 0.2%, comparable to the accuracy of the individual codes, for low optical depth and up to 2% for high optical depths (tau=4800). The problem of the collapsing cloud in HCO+ has a larger spread in results, ranging up to 12% for the J=4 population. The spread is largest at the radius where the transition from collisional to radiative excitation occurs. The resulting line profiles for the HCO+ J=4-3 transition agree to within 10%, i.e., within the calibration accuracy of most current telescopes. The comparison project and the results described in this paper provide a benchmark for future code development, and give an indication of the typical accuracy of present day calculations of molecular line transfer.

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arXiv2002

Chemistry as a probe of the structures and evolution of massive star forming regions

We present detailed thermal and gas-phase chemical models for the envelope of the massive star-forming region AFGL 2591. Time- and space-dependent chemistry are used to study the physical structure proposed by van der Tak et al. (1999; 2000), and the chemical evolution of this region. The model is compared with observations for 29 species covering a wide range of conditions within the source. Taking appropriate care when comparing models with both emission and absorption measurements, we find that the majority of the chemical structure can be well-explained. In particular, we find that the nitrogen and hydrocarbon chemistry can be significantly affected by temperature, with the possibility of high-temperature pathways to HCN. While we cannot determine the sulphur reservoir, the observations can be explained by models with the majority of the sulphur in CS in the cold gas, SO$_{2}$ in the warm gas, and atomic sulphur in the warmest gas. The observed abundances of ions such as HCO$^+$ and N$_2$H$^+$ and the cold gas-phase production of HCN constrain the cosmic-ray ionization rate to $\sim 5.6 \times 10^{-17}$ s$^{-1}$, to within a factor of three. Finally, we find that the model and observations can simultaneously agree at a reasonable level and often to within a factor of three for $7 \times 10^{3} \leq t(\mathrm{yrs}) \leq 5 \times 10^{4}$, with a strong preference for $t \sim 3 \times 10^{4}$ yrs since the collapse and formation of the central luminosity source.

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arXiv2001

Gas-phase H2O and CO2 toward massive protostars

We present a study of gas-phase H2O and CO2 toward a sample of 14 massive protostars with the Short Wavelength Spectrometer (SWS) on board the Infrared Space Observatory (ISO). Modeling of the H2O spectra using a homogeneous model with a constant excitation temperature T_ex shows that the H2O abundances increase with temperature, up to a few times 10^-5 with respect to H2 for the hottest sources (T_ex ~500 K). This is still a factor of 10 lower than the H2O ice abundances observed toward cold sources in which evaporation is not significant (Keane et al. 2001). Gas-phase CO2 is not abundant in our sources. The abundances are nearly constant for T_ex>~100 K at a value of a few times 10^-7, much lower than the solid-state abundances of ~1--3 times 10^-6 (Gerakines et al. 1999). For both H2O and CO2 the gas/solid ratio increases with temperature, but the increase is much stronger for H2O than for CO2, suggesting a different type of chemistry. In addition to the homogeneous models, a power law model has been developed for one of our sources, based on the physical structure of this region as determined from submillimeter data by van der Tak et al. (1999). The resulting H2O model spectrum gives a good fit to the data.

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arXiv1997

Models for Dense Molecular Cloud Cores

We present a detailed model for the thermal balance, chemistry, and radiative transfer within quiescent dense molecular cloud cores that contain a central protostar. Large variations in the gas temperature are expected to affect the gas-phase chemistry dramatically; with the predicted H2O abundance varying by more than a factor of 1000 within cloud cores. Based on our predicitions for the thermal and chemical structure of the cores, we have constructed self-consistent radiative transfer models to compute line strengths and profiles for transitions of various isotopomers of CO, H2O, and OI. We predict the high lying transitions of water to be in absorption, and low gain maser emission at 183 GHz. We predict the 63 micron line of OI to be in absorption against the continuum for many sources. Finally, our model can also account successfully for recent ISO observations of absorption in rovibrational transitions of water toward the source AFGL 2591.

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